RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 ZNF644Q9H582 1327 aaPredicted RBP4.11□□□□□ -1.75
KNL1-202ENST00000399668 LRRC9Q6ZRR7 1453 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 EIF3AQ14152 1382 aaKnown RBP4.11□□□□□ -1.75
KNL1-202ENST00000399668 USP47Q96K76 1375 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 KIAA1211Q6ZU35 1233 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 CYB5RLQ6IPT4 315 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 ERICH6BQ5W0A0 696 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 CHMP3Q9Y3E7 222 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 KIF15Q9NS87 1388 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 NLRP13Q86W25 1043 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 NESP48681 1621 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 KIF21AQ7Z4S6 1674 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 ARHGAP5Q13017 1502 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 GOLGA6L4A6NEF3 574 aa4.11□□□□□ -1.75
KNL1-202ENST00000399668 NGDNQ8NEJ9 315 aaKnown RBP4.11□□□□□ -1.75
KNL1-202ENST00000399668 MYH9P35579 1960 aaKnown RBP4.11□□□□□ -1.75
KNL1-202ENST00000399668 MCCP23508 829 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 MFAP1P55081 439 aaKnown RBP4.1□□□□□ -1.75
KNL1-202ENST00000399668 AMER1Q5JTC6 1135 aaPredicted RBP4.1□□□□□ -1.75
KNL1-202ENST00000399668 TERF2IPQ9NYB0 399 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 CUL7Q14999 1698 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 AMPHP49418 695 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 DRC7Q8IY82 874 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 TSHZ2Q9NRE2 1034 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 ELL2O00472 640 aaPredicted RBP4.1□□□□□ -1.75
KNL1-202ENST00000399668 PTPN23Q9H3S7 1636 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 CSB-PGBD3P0DP91 1061 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 CALD1Q05682 793 aaKnown RBP4.1□□□□□ -1.75
KNL1-202ENST00000399668 RSPH4AQ5TD94 716 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 FOXD4L1Q9NU39 408 aa4.1□□□□□ -1.75
KNL1-202ENST00000399668 KIF1BO60333 1816 aa4.09□□□□□ -1.75
KNL1-202ENST00000399668 HECW1Q76N89 1606 aa4.09□□□□□ -1.75
KNL1-202ENST00000399668 AQRO60306 1485 aaKnown RBP eCLIP4.09□□□□□ -1.751e-6■■■■□ 22.4
KNL1-202ENST00000399668 MSNP26038 577 aaKnown RBP4.09□□□□□ -1.75
KNL1-202ENST00000399668 PMFBP1Q8TBY8 1022 aa4.09□□□□□ -1.75
KNL1-202ENST00000399668 EID1Q9Y6B2 187 aa4.09□□□□□ -1.75
KNL1-202ENST00000399668 MYH6P13533 1939 aa4.09□□□□□ -1.75
KNL1-202ENST00000399668 ISY1Q9ULR0 285 aaKnown RBP4.09□□□□□ -1.75
KNL1-202ENST00000399668 TCERG1O14776 1098 aaKnown RBP4.09□□□□□ -1.76
KNL1-202ENST00000399668 CCDC9Q9Y3X0 531 aaKnown RBP4.09□□□□□ -1.76
KNL1-202ENST00000399668 ERICH3Q5RHP9 1530 aa4.09□□□□□ -1.76
KNL1-202ENST00000399668 CENPJQ9HC77 1338 aaPredicted RBP4.09□□□□□ -1.76
KNL1-202ENST00000399668 PCF11O94913 1555 aaKnown RBP4.09□□□□□ -1.76
KNL1-202ENST00000399668 NECTIN2Q92692 538 aa4.09□□□□□ -1.76
KNL1-202ENST00000399668 RWDD1Q9H446 243 aaPredicted RBP4.09□□□□□ -1.76
KNL1-202ENST00000399668 PBRM1Q86U86 1689 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 TIAM1Q13009 1591 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 FOXD4L6Q3SYB3 417 aaPredicted RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 FOXD4L3Q6VB84 417 aaPredicted RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 CFTRP13569 1480 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 MYBBP1AQ9BQG0 1328 aaKnown RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 GNL2Q13823 731 aaKnown RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 NOL8Q76FK4 1167 aaKnown RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 PRKRIP1Q9H875 184 aaPredicted RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 MINK1Q8N4C8 1332 aaPredicted RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 ARAP1Q96P48 1450 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 FOXD4L5Q5VV16 416 aaPredicted RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 FOXD4L4Q8WXT5 416 aaPredicted RBP4.08□□□□□ -1.76
KNL1-202ENST00000399668 CRBNQ96SW2 442 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 PTPRGP23470 1445 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 FGD6Q6ZV73 1430 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 IGF1RP08069 1367 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 ARID3AQ99856 593 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 TAF7LQ5H9L4 462 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 ANKRD45Q5TZF3 282 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 STK31Q9BXU1 1019 aa4.08□□□□□ -1.76
KNL1-202ENST00000399668 NGEFQ8N5V2 710 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 ITSN2Q9NZM3 1697 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 SLC4A3P48751 1232 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 IPO9Q96P70 1041 aaKnown RBP4.07□□□□□ -1.76
KNL1-202ENST00000399668 CGNL1Q0VF96 1302 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 ZBED9Q6R2W3 1325 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 APAF1O14727 1248 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 GORABQ5T7V8 394 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 FYCO1Q9BQS8 1478 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 PHLDB1Q86UU1 1377 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 RILPL2Q969X0 211 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 EVC2Q86UK5 1308 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 GPATCH3Q96I76 525 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 MYOM3Q5VTT5 1437 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 UACAQ9BZF9 1416 aa4.07□□□□□ -1.76
KNL1-202ENST00000399668 MICAL3Q7RTP6 2002 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 GBP4Q96PP9 640 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 NCOA2Q15596 1464 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 NCBP3Q53F19 620 aaKnown RBP4.06□□□□□ -1.76
KNL1-202ENST00000399668 BIVM-ERCC5R4GMW8 1640 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 HMOX1P09601 288 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 EXOC6Q8TAG9 804 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 COG6Q9Y2V7 657 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 RRP1P56182 461 aaKnown RBP4.06□□□□□ -1.76
KNL1-202ENST00000399668 L1TD1Q5T7N2 865 aaKnown RBP4.06□□□□□ -1.76
KNL1-202ENST00000399668 CFAP44Q96MT7 982 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 CHAF1AQ13111 956 aaPredicted RBP4.06□□□□□ -1.76
KNL1-202ENST00000399668 CITO14578 2027 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 IQGAP2Q13576 1575 aa4.06□□□□□ -1.76
KNL1-202ENST00000399668 TMEM132EQ6IEE7 984 aa4.05□□□□□ -1.76
KNL1-202ENST00000399668 WASHC2AQ641Q2 1341 aa4.05□□□□□ -1.76
KNL1-202ENST00000399668 GOLGA6L6A8MZA4 724 aa4.05□□□□□ -1.76
KNL1-202ENST00000399668 DNMBPQ6XZF7 1577 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms