RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 NUTM2BA6NNL0 878 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-217ENST00000399641 NUTM2EB1AL46 878 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-217ENST00000399641 KIF3BO15066 747 aa13.85□□□□□ -0.19
CACNA1C-217ENST00000399641 NUTM2AQ8IVF1 878 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-217ENST00000399641 DCAF11Q8TEB1 546 aa13.85□□□□□ -0.19
CACNA1C-217ENST00000399641 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
CACNA1C-217ENST00000399641 BCCIPQ9P287 314 aaKnown RBP eCLIP13.84□□□□□ -0.19
CACNA1C-217ENST00000399641 PPM1FP49593 454 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-217ENST00000399641 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.2
CACNA1C-217ENST00000399641 MS4A1P11836 297 aa13.83□□□□□ -0.2
CACNA1C-217ENST00000399641 HSP90AB3PQ58FF7 597 aa13.83□□□□□ -0.2
CACNA1C-217ENST00000399641 WDR70Q9NW82 654 aa13.82□□□□□ -0.2
CACNA1C-217ENST00000399641 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
CACNA1C-217ENST00000399641 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
CACNA1C-217ENST00000399641 CCDC97Q96F63 343 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-217ENST00000399641 ZFYVE27Q5T4F4 411 aa13.81□□□□□ -0.2
CACNA1C-217ENST00000399641 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
CACNA1C-217ENST00000399641 WASHC2AQ641Q2 1341 aa13.81□□□□□ -0.2
CACNA1C-217ENST00000399641 NAP1L1P55209 391 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-217ENST00000399641 AMOTL1Q8IY63 956 aa13.8□□□□□ -0.2
CACNA1C-217ENST00000399641 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
CACNA1C-217ENST00000399641 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
CACNA1C-217ENST00000399641 HSP90AA2PQ14568 343 aaPredicted RBP13.8□□□□□ -0.2
CACNA1C-217ENST00000399641 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-217ENST00000399641 STK31Q9BXU1 1019 aa13.8□□□□□ -0.2
CACNA1C-217ENST00000399641 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
CACNA1C-217ENST00000399641 PSME1Q06323 249 aa13.79□□□□□ -0.2
CACNA1C-217ENST00000399641 MIER1Q8N108 512 aa13.79□□□□□ -0.2
CACNA1C-217ENST00000399641 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
CACNA1C-217ENST00000399641 PAXIP1Q6ZW49 1069 aaPredicted RBP13.79□□□□□ -0.2
CACNA1C-217ENST00000399641 RBM33Q96EV2 1170 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-217ENST00000399641 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
CACNA1C-217ENST00000399641 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.2
CACNA1C-217ENST00000399641 CCDC70Q6NSX1 233 aa13.77□□□□□ -0.21
CACNA1C-217ENST00000399641 STK11IPQ8N1F8 1099 aa13.77□□□□□ -0.21
CACNA1C-217ENST00000399641 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
CACNA1C-217ENST00000399641 HSP90AB2PQ58FF8 381 aa13.76□□□□□ -0.21
CACNA1C-217ENST00000399641 VPS37DQ86XT2 251 aa13.76□□□□□ -0.21
CACNA1C-217ENST00000399641 ANKRD62A6NC57 917 aa13.76□□□□□ -0.21
CACNA1C-217ENST00000399641 TPM2P07951 284 aa13.75□□□□□ -0.21
CACNA1C-217ENST00000399641 SF3A1Q15459 793 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-217ENST00000399641 MFAP1P55081 439 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-217ENST00000399641 ODF2Q5BJF6 829 aa13.75□□□□□ -0.21
CACNA1C-217ENST00000399641 GPATCH3Q96I76 525 aa13.75□□□□□ -0.21
CACNA1C-217ENST00000399641 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-217ENST00000399641 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-217ENST00000399641 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
CACNA1C-217ENST00000399641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.74□□□□□ -0.21
CACNA1C-217ENST00000399641 GBP4Q96PP9 640 aa13.74□□□□□ -0.21
CACNA1C-217ENST00000399641 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
CACNA1C-217ENST00000399641 FOSBP53539 338 aa13.73□□□□□ -0.21
CACNA1C-217ENST00000399641 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
CACNA1C-217ENST00000399641 GOLGA6L3A6NEY3 463 aa13.73□□□□□ -0.21
CACNA1C-217ENST00000399641 KDM4AO75164 1064 aa13.73□□□□□ -0.21
CACNA1C-217ENST00000399641 SYAP1Q96A49 352 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-217ENST00000399641 TERF2IPQ9NYB0 399 aa13.72□□□□□ -0.21
CACNA1C-217ENST00000399641 RUFY1Q96T51 708 aa13.72□□□□□ -0.21
CACNA1C-217ENST00000399641 IBSPP21815 317 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-217ENST00000399641 TTLL5Q6EMB2 1281 aa13.72□□□□□ -0.21
CACNA1C-217ENST00000399641 GPS2Q13227 327 aa13.71□□□□□ -0.21
CACNA1C-217ENST00000399641 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
CACNA1C-217ENST00000399641 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
CACNA1C-217ENST00000399641 HMMRO75330 724 aa13.69□□□□□ -0.22
CACNA1C-217ENST00000399641 CCDC191Q8NCU4 936 aa13.69□□□□□ -0.22
CACNA1C-217ENST00000399641 DHX16O60231 1041 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-217ENST00000399641 WRNQ14191 1432 aaPredicted RBP eCLIP13.69□□□□□ -0.22
CACNA1C-217ENST00000399641 H3BQV1 296 aa13.69□□□□□ -0.22
CACNA1C-217ENST00000399641 IFFO2Q5TF58 517 aa13.69□□□□□ -0.22
CACNA1C-217ENST00000399641 PPP4R2Q9NY27 417 aa13.68□□□□□ -0.22
CACNA1C-217ENST00000399641 CCDC34Q96HJ3 373 aa13.68□□□□□ -0.22
CACNA1C-217ENST00000399641 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
CACNA1C-217ENST00000399641 H0YHG0 523 aa13.68□□□□□ -0.22
CACNA1C-217ENST00000399641 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
CACNA1C-217ENST00000399641 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
CACNA1C-217ENST00000399641 TMEM132AQ24JP5 1023 aa13.67□□□□□ -0.22
CACNA1C-217ENST00000399641 ITPRIPQ8IWB1 547 aa13.67□□□□□ -0.22
CACNA1C-217ENST00000399641 RDXP35241 583 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-217ENST00000399641 CCDC43Q96MW1 224 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-217ENST00000399641 TEX35Q5T0J7 233 aa13.65□□□□□ -0.22
CACNA1C-217ENST00000399641 TPM1P09493 284 aa13.65□□□□□ -0.22
CACNA1C-217ENST00000399641 NEFHP12036 1026 aa13.65□□□□□ -0.22
CACNA1C-217ENST00000399641 FAM13BQ9NYF5 915 aa13.65□□□□□ -0.22
CACNA1C-217ENST00000399641 MTMR7Q9Y216 660 aa13.64□□□□□ -0.23
CACNA1C-217ENST00000399641 GOLGA6L19H0YKK7 550 aa13.64□□□□□ -0.23
CACNA1C-217ENST00000399641 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-217ENST00000399641 TEFQ10587 303 aa13.64□□□□□ -0.23
CACNA1C-217ENST00000399641 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
CACNA1C-217ENST00000399641 CUX2O14529 1486 aa13.64□□□□□ -0.23
CACNA1C-217ENST00000399641 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-217ENST00000399641 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
CACNA1C-217ENST00000399641 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
CACNA1C-217ENST00000399641 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-217ENST00000399641 STRN4Q9NRL3 753 aa13.62□□□□□ -0.23
CACNA1C-217ENST00000399641 PROSER2Q86WR7 435 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-217ENST00000399641 WWC2Q6AWC2 1192 aa13.62□□□□□ -0.23
CACNA1C-217ENST00000399641 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-217ENST00000399641 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-217ENST00000399641 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-217ENST00000399641 SEPT11Q9NVA2 429 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-217ENST00000399641 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms