RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 DCAF11Q8TEB1 546 aa31.58■■■□□ 2.65
RABGGTA-202ENST00000399409 CCDC144AA2RUR9 1427 aa31.57■■■□□ 2.64
RABGGTA-202ENST00000399409 UHRF1BP1LA0JNW5 1464 aa31.55■■■□□ 2.64
RABGGTA-202ENST00000399409 IQGAP3Q86VI3 1631 aa31.55■■■□□ 2.64
RABGGTA-202ENST00000399409 KDM2AQ9Y2K7 1162 aa31.55■■■□□ 2.64
RABGGTA-202ENST00000399409 DUOX2Q9NRD8 1548 aa31.54■■■□□ 2.64
RABGGTA-202ENST00000399409 POLR3GLQ9BT43 218 aa31.52■■■□□ 2.64
RABGGTA-202ENST00000399409 PLCH2O75038 1416 aa31.52■■■□□ 2.64
RABGGTA-202ENST00000399409 CLASP1Q7Z460 1538 aa31.51■■■□□ 2.63
RABGGTA-202ENST00000399409 PRAG1Q86YV5 1406 aa31.5■■■□□ 2.63
RABGGTA-202ENST00000399409 ERBINQ96RT1 1412 aa31.5■■■□□ 2.63
RABGGTA-202ENST00000399409 TRPM1Q7Z4N2 1603 aa31.49■■■□□ 2.63
RABGGTA-202ENST00000399409 ZCCHC11Q5TAX3 1644 aaKnown RBP31.48■■■□□ 2.63
RABGGTA-202ENST00000399409 ST20-MTHFSA0A0A6YYL1 179 aa31.48■■■□□ 2.63
RABGGTA-202ENST00000399409 MAGI2Q86UL8 1455 aa31.48■■■□□ 2.63
RABGGTA-202ENST00000399409 KTN1Q86UP2 1357 aaKnown RBP31.48■■■□□ 2.63
RABGGTA-202ENST00000399409 PLA2R1Q13018 1463 aa31.47■■■□□ 2.63
RABGGTA-202ENST00000399409 EFCAB2Q5VUJ9 269 aa31.45■■■□□ 2.63
RABGGTA-202ENST00000399409 ATP10AO60312 1499 aa31.45■■■□□ 2.63
RABGGTA-202ENST00000399409 LAMC1P11047 1609 aa31.43■■■□□ 2.62
RABGGTA-202ENST00000399409 GPRASP1Q5JY77 1395 aa31.42■■■□□ 2.62
RABGGTA-202ENST00000399409 E9PCH4 1651 aa31.42■■■□□ 2.62
RABGGTA-202ENST00000399409 ABCC1P33527 1531 aa31.41■■■□□ 2.62
RABGGTA-202ENST00000399409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.4■■■□□ 2.621e-6■■□□□ 13.5
RABGGTA-202ENST00000399409 A2MP01023 1474 aa31.39■■■□□ 2.62
RABGGTA-202ENST00000399409 PPP4R2Q9NY27 417 aa31.38■■■□□ 2.61
RABGGTA-202ENST00000399409 EIF2AK4Q9P2K8 1649 aaKnown RBP31.38■■■□□ 2.61
RABGGTA-202ENST00000399409 SMG6Q86US8 1419 aaKnown RBP31.38■■■□□ 2.61
RABGGTA-202ENST00000399409 IRX6P78412 446 aaPredicted RBP31.37■■■□□ 2.61
RABGGTA-202ENST00000399409 RALBP1Q15311 655 aa31.37■■■□□ 2.61
RABGGTA-202ENST00000399409 ARAP3Q8WWN8 1544 aa31.37■■■□□ 2.61
RABGGTA-202ENST00000399409 PNISRQ8TF01 805 aaKnown RBP31.33■■■□□ 2.61
RABGGTA-202ENST00000399409 BRD4O60885 1362 aaPredicted RBP31.33■■■□□ 2.61
RABGGTA-202ENST00000399409 TMC1Q8TDI8 760 aa31.33■■■□□ 2.61
RABGGTA-202ENST00000399409 PRDM15P57071 1507 aaPredicted RBP31.31■■■□□ 2.6
RABGGTA-202ENST00000399409 RGL3Q3MIN7 710 aa31.31■■■□□ 2.6
RABGGTA-202ENST00000399409 MYBBP1AQ9BQG0 1328 aaKnown RBP31.31■■■□□ 2.6
RABGGTA-202ENST00000399409 RBM19Q9Y4C8 960 aaKnown RBP31.31■■■□□ 2.6
RABGGTA-202ENST00000399409 RTEL1-TNFRSF6BF6WH68 1400 aa31.31■■■□□ 2.6
RABGGTA-202ENST00000399409 TRAPPC8Q9Y2L5 1435 aa31.29■■■□□ 2.6
RABGGTA-202ENST00000399409 CNGB1Q14028 1251 aaPredicted RBP31.27■■■□□ 2.6
RABGGTA-202ENST00000399409 NUDCQ9Y266 331 aa31.26■■■□□ 2.59
RABGGTA-202ENST00000399409 LRPPRCP42704 1394 aaKnown RBP31.25■■■□□ 2.59
RABGGTA-202ENST00000399409 NBPF1Q3BBV0 1214 aa31.25■■■□□ 2.59
RABGGTA-202ENST00000399409 COL17A1Q9UMD9 1497 aaPredicted RBP31.24■■■□□ 2.59
RABGGTA-202ENST00000399409 SPAG9O60271 1321 aaKnown RBP31.22■■■□□ 2.59
RABGGTA-202ENST00000399409 WASHC2CQ9Y4E1 1318 aa31.19■■■□□ 2.58
RABGGTA-202ENST00000399409 ZFYVE16Q7Z3T8 1539 aa31.19■■■□□ 2.58
RABGGTA-202ENST00000399409 PARD3Q8TEW0 1356 aa31.19■■■□□ 2.58
RABGGTA-202ENST00000399409 RNF17Q9BXT8 1623 aaKnown RBP31.18■■■□□ 2.58
RABGGTA-202ENST00000399409 RNF123Q5XPI4 1314 aa31.17■■■□□ 2.58
RABGGTA-202ENST00000399409 TESK2Q96S53 571 aa31.16■■■□□ 2.58
RABGGTA-202ENST00000399409 NLRP13Q86W25 1043 aa31.15■■■□□ 2.58
RABGGTA-202ENST00000399409 WDR7Q9Y4E6 1490 aa31.15■■■□□ 2.58
RABGGTA-202ENST00000399409 STAC3Q96MF2 364 aa31.14■■■□□ 2.58
RABGGTA-202ENST00000399409 TRPM2O94759 1503 aa31.14■■■□□ 2.58
RABGGTA-202ENST00000399409 DEPDC5O75140 1603 aa31.14■■■□□ 2.58
RABGGTA-202ENST00000399409 PER1O15534 1290 aaPredicted RBP31.12■■■□□ 2.57
RABGGTA-202ENST00000399409 TMF1P82094 1093 aa31.11■■■□□ 2.57
RABGGTA-202ENST00000399409 ABCA9Q8IUA7 1624 aa31.11■■■□□ 2.57
RABGGTA-202ENST00000399409 PTPRTO14522 1441 aa31.1■■■□□ 2.57
RABGGTA-202ENST00000399409 DISP3Q9P2K9 1392 aa31.1■■■□□ 2.57
RABGGTA-202ENST00000399409 AFAP1Q8N556 730 aa31.08■■■□□ 2.57
RABGGTA-202ENST00000399409 ANP32EQ9BTT0 268 aa31.08■■■□□ 2.57
RABGGTA-202ENST00000399409 MADDQ8WXG6 1647 aa31.08■■■□□ 2.57
RABGGTA-202ENST00000399409 TET3O43151 1660 aa31.07■■■□□ 2.56
RABGGTA-202ENST00000399409 INO80Q9ULG1 1556 aaPredicted RBP31.07■■■□□ 2.56
RABGGTA-202ENST00000399409 CEP152O94986 1710 aa31.07■■■□□ 2.56
RABGGTA-202ENST00000399409 SPHKAPQ2M3C7 1700 aa31.07■■■□□ 2.56
RABGGTA-202ENST00000399409 ATP7AQ04656 1500 aa31.06■■■□□ 2.56
RABGGTA-202ENST00000399409 FANCAO15360 1455 aa31.05■■■□□ 2.56
RABGGTA-202ENST00000399409 KANK1Q14678 1352 aa31.05■■■□□ 2.56
RABGGTA-202ENST00000399409 INSRP06213 1382 aa31.05■■■□□ 2.56
RABGGTA-202ENST00000399409 VWDEQ8N2E2 1590 aa31.03■■■□□ 2.56
RABGGTA-202ENST00000399409 B4GALNT3Q6L9W6 998 aa31.03■■■□□ 2.56
RABGGTA-202ENST00000399409 ZMYM4Q5VZL5 1548 aa31.02■■■□□ 2.56
RABGGTA-202ENST00000399409 IQGAP1P46940 1657 aa31.01■■■□□ 2.55
RABGGTA-202ENST00000399409 SCAPERQ9BY12 1400 aa31■■■□□ 2.55
RABGGTA-202ENST00000399409 NEURL4Q96JN8 1562 aa31■■■□□ 2.55
RABGGTA-202ENST00000399409 CLTCL1P53675 1640 aa30.99■■■□□ 2.55
RABGGTA-202ENST00000399409 FANCIQ9NVI1 1328 aa30.99■■■□□ 2.55
RABGGTA-202ENST00000399409 PANK3Q9H999 370 aa30.99■■■□□ 2.55
RABGGTA-202ENST00000399409 PDE3BQ13370 1112 aa30.97■■■□□ 2.55
RABGGTA-202ENST00000399409 ADGRL1O94910 1474 aa30.96■■■□□ 2.55
RABGGTA-202ENST00000399409 SCAF11Q99590 1463 aaKnown RBP30.94■■■□□ 2.54
RABGGTA-202ENST00000399409 CDCA8Q53HL2 280 aa30.93■■■□□ 2.54
RABGGTA-202ENST00000399409 KIAA1210Q9ULL0 1709 aa30.91■■■□□ 2.54
RABGGTA-202ENST00000399409 CC2D1BQ5T0F9 858 aaKnown RBP30.89■■■□□ 2.54
RABGGTA-202ENST00000399409 ASXL2Q76L83 1435 aa30.88■■■□□ 2.53
RABGGTA-202ENST00000399409 KIF3BO15066 747 aa30.87■■■□□ 2.53
RABGGTA-202ENST00000399409 BLMP54132 1417 aaPredicted RBP30.87■■■□□ 2.53
RABGGTA-202ENST00000399409 MROH1Q8NDA8 1641 aa30.86■■■□□ 2.53
RABGGTA-202ENST00000399409 EIF3AQ14152 1382 aaKnown RBP30.86■■■□□ 2.53
RABGGTA-202ENST00000399409 SYNMO15061 1565 aa30.85■■■□□ 2.53
RABGGTA-202ENST00000399409 CCDC136Q96JN2 1154 aa30.84■■■□□ 2.53
RABGGTA-202ENST00000399409 MYT1LQ9UL68 1186 aa30.82■■■□□ 2.52
RABGGTA-202ENST00000399409 MYOM2P54296 1465 aa30.82■■■□□ 2.52
RABGGTA-202ENST00000399409 SENP3-EIF4A1A0A087X0R7 540 aa30.82■■■□□ 2.52
RABGGTA-202ENST00000399409 SLC24A1O60721 1099 aa30.81■■■□□ 2.52
RABGGTA-202ENST00000399409 RRP1P56182 461 aaKnown RBP30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms