RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 SHANK2Q9UPX8 1470 aa33.45■■■□□ 2.95
RUNX1-204ENST00000399237 RNF17Q9BXT8 1623 aaKnown RBP33.45■■■□□ 2.95
RUNX1-204ENST00000399237 DAPK1P53355 1430 aa33.44■■■□□ 2.94
RUNX1-204ENST00000399237 PTPRKQ15262 1439 aa33.44■■■□□ 2.94
RUNX1-204ENST00000399237 KDM5DQ9BY66 1539 aa33.42■■■□□ 2.94
RUNX1-204ENST00000399237 MROH1Q8NDA8 1641 aa33.42■■■□□ 2.94
RUNX1-204ENST00000399237 EIF2AK4Q9P2K8 1649 aaKnown RBP33.42■■■□□ 2.94
RUNX1-204ENST00000399237 MYO3AQ8NEV4 1616 aa33.4■■■□□ 2.94
RUNX1-204ENST00000399237 PPP6R1Q9UPN7 881 aa33.39■■■□□ 2.94
RUNX1-204ENST00000399237 FAM135AQ9P2D6 1515 aa33.38■■■□□ 2.93
RUNX1-204ENST00000399237 PTPRTO14522 1441 aa33.37■■■□□ 2.93
RUNX1-204ENST00000399237 NCOA1Q15788 1441 aa33.37■■■□□ 2.93
RUNX1-204ENST00000399237 DUOX2Q9NRD8 1548 aa33.36■■■□□ 2.93
RUNX1-204ENST00000399237 ZNF142P52746 1687 aaPredicted RBP33.36■■■□□ 2.93
RUNX1-204ENST00000399237 KIF15Q9NS87 1388 aa33.32■■■□□ 2.92
RUNX1-204ENST00000399237 CAMSAP1Q5T5Y3 1602 aa33.31■■■□□ 2.92
RUNX1-204ENST00000399237 ABCC3O15438 1527 aa33.3■■■□□ 2.92
RUNX1-204ENST00000399237 CEP152O94986 1710 aa33.29■■■□□ 2.92
RUNX1-204ENST00000399237 PZPP20742 1482 aa33.29■■■□□ 2.92
RUNX1-204ENST00000399237 CEP170BQ9Y4F5 1589 aaPredicted RBP33.28■■■□□ 2.92
RUNX1-204ENST00000399237 ZC3H13Q5T200 1668 aaKnown RBP33.28■■■□□ 2.92
RUNX1-204ENST00000399237 FBXO31Q5XUX0 539 aaPredicted RBP33.25■■■□□ 2.91
RUNX1-204ENST00000399237 RRP7BPQ9NSQ0 103 aa33.25■■■□□ 2.91
RUNX1-204ENST00000399237 WASHC2CQ9Y4E1 1318 aa33.25■■■□□ 2.91
RUNX1-204ENST00000399237 ERBINQ96RT1 1412 aa33.24■■■□□ 2.91
RUNX1-204ENST00000399237 PRDM15P57071 1507 aaPredicted RBP33.23■■■□□ 2.91
RUNX1-204ENST00000399237 CHIC2Q9UKJ5 165 aa33.23■■■□□ 2.91
RUNX1-204ENST00000399237 DEPDC5O75140 1603 aa33.23■■■□□ 2.91
RUNX1-204ENST00000399237 PPARGC1BQ86YN6 1023 aaKnown RBP33.22■■■□□ 2.91
RUNX1-204ENST00000399237 ADGRL2O95490 1459 aa33.22■■■□□ 2.91
RUNX1-204ENST00000399237 NCKAP5LQ9HCH0 1330 aa33.21■■■□□ 2.91
RUNX1-204ENST00000399237 FAM50AQ14320 339 aaKnown RBP33.2■■■□□ 2.91
RUNX1-204ENST00000399237 PLA2R1Q13018 1463 aa33.18■■■□□ 2.9
RUNX1-204ENST00000399237 LTBP4Q8N2S1 1624 aa33.17■■■□□ 2.9
RUNX1-204ENST00000399237 TNRQ92752 1358 aa33.16■■■□□ 2.9
RUNX1-204ENST00000399237 ANKRD30AQ9BXX3 1397 aa33.16■■■□□ 2.9
RUNX1-204ENST00000399237 A2ML1A8K2U0 1454 aa33.16■■■□□ 2.9
RUNX1-204ENST00000399237 SPATA31D1Q6ZQQ2 1576 aa33.13■■■□□ 2.89
RUNX1-204ENST00000399237 PKD2Q13563 968 aa33.12■■■□□ 2.89
RUNX1-204ENST00000399237 VWDEQ8N2E2 1590 aa33.09■■■□□ 2.89
RUNX1-204ENST00000399237 ERVK-7P63135 1459 aa33.09■■■□□ 2.89
RUNX1-204ENST00000399237 CFAP65Q6ZU64 1925 aaKnown RBP33.08■■■□□ 2.89
RUNX1-204ENST00000399237 ZNF335Q9H4Z2 1342 aaPredicted RBP33.07■■■□□ 2.88
RUNX1-204ENST00000399237 IQSEC2Q5JU85 1478 aa33.03■■■□□ 2.88
RUNX1-204ENST00000399237 NLRP1Q9C000 1473 aa33.02■■■□□ 2.88
RUNX1-204ENST00000399237 LMTK2Q8IWU2 1503 aa33.01■■■□□ 2.87
RUNX1-204ENST00000399237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33■■■□□ 2.872e-6■■□□□ 11.6
RUNX1-204ENST00000399237 ARHGAP31Q2M1Z3 1444 aa33■■■□□ 2.87
RUNX1-204ENST00000399237 POLR1AO95602 1720 aaPredicted RBP32.99■■■□□ 2.87
RUNX1-204ENST00000399237 NEURL4Q96JN8 1562 aa32.99■■■□□ 2.87
RUNX1-204ENST00000399237 ANKRD50Q9ULJ7 1429 aa32.98■■■□□ 2.87
RUNX1-204ENST00000399237 UGGT1Q9NYU2 1555 aa32.97■■■□□ 2.87
RUNX1-204ENST00000399237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.95■■■□□ 2.86
RUNX1-204ENST00000399237 UBR1Q8IWV7 1749 aa32.93■■■□□ 2.86
RUNX1-204ENST00000399237 EFCAB6Q5THR3 1501 aa32.92■■■□□ 2.86
RUNX1-204ENST00000399237 UNC13BO14795 1591 aa32.92■■■□□ 2.86
RUNX1-204ENST00000399237 ROCK1Q13464 1354 aa32.92■■■□□ 2.86
RUNX1-204ENST00000399237 KANK1Q14678 1352 aa32.91■■■□□ 2.86
RUNX1-204ENST00000399237 RRBP1Q9P2E9 1410 aaKnown RBP32.91■■■□□ 2.86
RUNX1-204ENST00000399237 SYNMO15061 1565 aa32.88■■■□□ 2.85
RUNX1-204ENST00000399237 ITGAEP38570 1179 aa32.87■■■□□ 2.85
RUNX1-204ENST00000399237 THEMISQ8N1K5 641 aaPredicted RBP32.86■■■□□ 2.85
RUNX1-204ENST00000399237 PIK3C2BO00750 1634 aa32.85■■■□□ 2.85
RUNX1-204ENST00000399237 ANKLE2Q86XL3 938 aa32.84■■■□□ 2.85
RUNX1-204ENST00000399237 TET3O43151 1660 aa32.83■■■□□ 2.85
RUNX1-204ENST00000399237 UBAP1LF5GYI3 381 aa32.82■■■□□ 2.84
RUNX1-204ENST00000399237 NOS1P29475 1434 aa32.8■■■□□ 2.84
RUNX1-204ENST00000399237 GCC2Q8IWJ2 1684 aa32.79■■■□□ 2.84
RUNX1-204ENST00000399237 DISP3Q9P2K9 1392 aa32.79■■■□□ 2.84
RUNX1-204ENST00000399237 MED14O60244 1454 aa32.78■■■□□ 2.84
RUNX1-204ENST00000399237 IQGAP3Q86VI3 1631 aa32.77■■■□□ 2.84
RUNX1-204ENST00000399237 NPHP4O75161 1426 aaPredicted RBP32.76■■■□□ 2.83
RUNX1-204ENST00000399237 E9PCH4 1651 aa32.75■■■□□ 2.83
RUNX1-204ENST00000399237 IQGAP1P46940 1657 aa32.75■■■□□ 2.83
RUNX1-204ENST00000399237 ARHGAP23Q9P227 1491 aa32.74■■■□□ 2.83
RUNX1-204ENST00000399237 SLIT1O75093 1534 aa32.72■■■□□ 2.83
RUNX1-204ENST00000399237 CPS1P31327 1500 aa32.72■■■□□ 2.83
RUNX1-204ENST00000399237 KDM5AP29375 1690 aaKnown RBP32.72■■■□□ 2.83
RUNX1-204ENST00000399237 RPRD2Q5VT52 1461 aaKnown RBP32.71■■■□□ 2.83
RUNX1-204ENST00000399237 IDI1Q13907 227 aa32.67■■■□□ 2.82
RUNX1-204ENST00000399237 ADGRB3O60242 1522 aa32.66■■■□□ 2.82
RUNX1-204ENST00000399237 SCAF11Q99590 1463 aaKnown RBP32.65■■■□□ 2.82
RUNX1-204ENST00000399237 STRCP1A6NGW2 1772 aa32.64■■■□□ 2.82
RUNX1-204ENST00000399237 LTKP29376 864 aa32.64■■■□□ 2.82
RUNX1-204ENST00000399237 MYO5BQ9ULV0 1848 aa32.64■■■□□ 2.82
RUNX1-204ENST00000399237 NAIPQ13075 1403 aa32.63■■■□□ 2.81
RUNX1-204ENST00000399237 NUP155O75694 1391 aa32.6■■■□□ 2.81
RUNX1-204ENST00000399237 SCAF1Q9H7N4 1312 aaKnown RBP32.6■■■□□ 2.81
RUNX1-204ENST00000399237 ILDR2Q71H61 639 aa32.6■■■□□ 2.81
RUNX1-204ENST00000399237 TMEM2Q9UHN6 1383 aa32.59■■■□□ 2.81
RUNX1-204ENST00000399237 PIP4K2BP78356 416 aa32.58■■■□□ 2.81
RUNX1-204ENST00000399237 TMEM131LA2VDJ0 1609 aa32.56■■■□□ 2.8
RUNX1-204ENST00000399237 TOM1O60784 492 aa32.56■■■□□ 2.8
RUNX1-204ENST00000399237 TXNDC2Q86VQ3 553 aa32.53■■■□□ 2.8
RUNX1-204ENST00000399237 SLC52A1Q9NWF4 448 aa32.52■■■□□ 2.8
RUNX1-204ENST00000399237 HFM1A2PYH4 1435 aa32.51■■■□□ 2.8
RUNX1-204ENST00000399237 STAG3Q9UJ98 1225 aa32.5■■■□□ 2.79
RUNX1-204ENST00000399237 SPHKAPQ2M3C7 1700 aa32.48■■■□□ 2.79
RUNX1-204ENST00000399237 HSPA1LP34931 641 aa32.48■■■□□ 2.79
RUNX1-204ENST00000399237 LRRC7Q96NW7 1537 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms