RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 SPAG9O60271 1321 aaKnown RBP24.53■■□□□ 1.52
HLA-DQB1-204ENST00000399084 C11orf95C9JLR9 678 aaPredicted RBP24.52■■□□□ 1.52
HLA-DQB1-204ENST00000399084 TRAPPC8Q9Y2L5 1435 aa24.52■■□□□ 1.52
HLA-DQB1-204ENST00000399084 STAC3Q96MF2 364 aa24.49■■□□□ 1.51
HLA-DQB1-204ENST00000399084 FANCAO15360 1455 aa24.48■■□□□ 1.51
HLA-DQB1-204ENST00000399084 PLA2R1Q13018 1463 aa24.48■■□□□ 1.51
HLA-DQB1-204ENST00000399084 DCAF11Q8TEB1 546 aa24.47■■□□□ 1.51
HLA-DQB1-204ENST00000399084 PRKRIP1Q9H875 184 aaPredicted RBP24.47■■□□□ 1.51
HLA-DQB1-204ENST00000399084 CARD11Q9BXL7 1154 aa24.47■■□□□ 1.51
HLA-DQB1-204ENST00000399084 ZFYVE16Q7Z3T8 1539 aa24.47■■□□□ 1.51
HLA-DQB1-204ENST00000399084 NPM1P06748 294 aaKnown RBP eCLIP24.45■■□□□ 1.5
HLA-DQB1-204ENST00000399084 ASXL2Q76L83 1435 aa24.45■■□□□ 1.5
HLA-DQB1-204ENST00000399084 ZNF326Q5BKZ1 582 aaKnown RBP24.44■■□□□ 1.5
HLA-DQB1-204ENST00000399084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.44■■□□□ 1.5
HLA-DQB1-204ENST00000399084 PRAG1Q86YV5 1406 aa24.43■■□□□ 1.5
HLA-DQB1-204ENST00000399084 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
HLA-DQB1-204ENST00000399084 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
HLA-DQB1-204ENST00000399084 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
HLA-DQB1-204ENST00000399084 GPRASP1Q5JY77 1395 aa24.42■■□□□ 1.5
HLA-DQB1-204ENST00000399084 LAMC1P11047 1609 aa24.42■■□□□ 1.5
HLA-DQB1-204ENST00000399084 INO80Q9ULG1 1556 aaPredicted RBP24.41■■□□□ 1.5
HLA-DQB1-204ENST00000399084 DEPDC5O75140 1603 aa24.41■■□□□ 1.5
HLA-DQB1-204ENST00000399084 EIF2AK4Q9P2K8 1649 aaKnown RBP24.4■■□□□ 1.5
HLA-DQB1-204ENST00000399084 ATP7AQ04656 1500 aa24.4■■□□□ 1.5
HLA-DQB1-204ENST00000399084 ADGRL1O94910 1474 aa24.39■■□□□ 1.49
HLA-DQB1-204ENST00000399084 KANK1Q14678 1352 aa24.39■■□□□ 1.49
HLA-DQB1-204ENST00000399084 AFAP1Q8N556 730 aa24.38■■□□□ 1.49
HLA-DQB1-204ENST00000399084 TRPM1Q7Z4N2 1603 aa24.38■■□□□ 1.49
HLA-DQB1-204ENST00000399084 BCORL1Q5H9F3 1711 aa24.38■■□□□ 1.49
HLA-DQB1-204ENST00000399084 KDM2AQ9Y2K7 1162 aa24.38■■□□□ 1.49
HLA-DQB1-204ENST00000399084 SUPT16HQ9Y5B9 1047 aaKnown RBP24.38■■□□□ 1.49
HLA-DQB1-204ENST00000399084 KTN1Q86UP2 1357 aaKnown RBP24.37■■□□□ 1.49
HLA-DQB1-204ENST00000399084 SCAPERQ9BY12 1400 aa24.36■■□□□ 1.49
HLA-DQB1-204ENST00000399084 CFAP74Q9C0B2 1584 aa24.36■■□□□ 1.49
HLA-DQB1-204ENST00000399084 A2MP01023 1474 aa24.36■■□□□ 1.49
HLA-DQB1-204ENST00000399084 DHX29Q7Z478 1369 aaKnown RBP24.35■■□□□ 1.49
HLA-DQB1-204ENST00000399084 PTPRTO14522 1441 aa24.35■■□□□ 1.49
HLA-DQB1-204ENST00000399084 VWDEQ8N2E2 1590 aa24.33■■□□□ 1.49
HLA-DQB1-204ENST00000399084 NEURL4Q96JN8 1562 aa24.33■■□□□ 1.49
HLA-DQB1-204ENST00000399084 TET3O43151 1660 aa24.33■■□□□ 1.49
HLA-DQB1-204ENST00000399084 TRPM2O94759 1503 aa24.32■■□□□ 1.48
HLA-DQB1-204ENST00000399084 ZNF518AQ6AHZ1 1483 aa24.3■■□□□ 1.48
HLA-DQB1-204ENST00000399084 ST20-MTHFSA0A0A6YYL1 179 aa24.3■■□□□ 1.48
HLA-DQB1-204ENST00000399084 E9PCH4 1651 aa24.29■■□□□ 1.48
HLA-DQB1-204ENST00000399084 PRDM15P57071 1507 aaPredicted RBP24.27■■□□□ 1.48
HLA-DQB1-204ENST00000399084 NEFLP07196 543 aa24.27■■□□□ 1.48
HLA-DQB1-204ENST00000399084 HNRNPUQ00839 825 aaKnown RBP eCLIP24.27■■□□□ 1.48
HLA-DQB1-204ENST00000399084 RGL3Q3MIN7 710 aa24.27■■□□□ 1.48
HLA-DQB1-204ENST00000399084 MRS2Q9HD23 443 aa24.27■■□□□ 1.48
HLA-DQB1-204ENST00000399084 SPHKAPQ2M3C7 1700 aa24.25■■□□□ 1.47
HLA-DQB1-204ENST00000399084 CD109Q6YHK3 1445 aa24.24■■□□□ 1.47
HLA-DQB1-204ENST00000399084 WASHC2CQ9Y4E1 1318 aa24.22■■□□□ 1.47
HLA-DQB1-204ENST00000399084 CEP152O94986 1710 aa24.22■■□□□ 1.47
HLA-DQB1-204ENST00000399084 MLH3Q9UHC1 1453 aa24.21■■□□□ 1.47
HLA-DQB1-204ENST00000399084 RALBP1Q15311 655 aa24.21■■□□□ 1.47
HLA-DQB1-204ENST00000399084 LMTK2Q8IWU2 1503 aa24.21■■□□□ 1.47
HLA-DQB1-204ENST00000399084 KIF3BO15066 747 aa24.2■■□□□ 1.46
HLA-DQB1-204ENST00000399084 KIDINS220Q9ULH0 1771 aa24.19■■□□□ 1.46
HLA-DQB1-204ENST00000399084 NEO1Q92859 1461 aa24.19■■□□□ 1.46
HLA-DQB1-204ENST00000399084 SLC24A1O60721 1099 aa24.18■■□□□ 1.46
HLA-DQB1-204ENST00000399084 RNF17Q9BXT8 1623 aaKnown RBP24.18■■□□□ 1.46
HLA-DQB1-204ENST00000399084 ZBED9Q6R2W3 1325 aa24.18■■□□□ 1.46
HLA-DQB1-204ENST00000399084 POGZQ7Z3K3 1410 aa24.17■■□□□ 1.46
HLA-DQB1-204ENST00000399084 MYT1LQ9UL68 1186 aa24.17■■□□□ 1.46
HLA-DQB1-204ENST00000399084 NBPF1Q3BBV0 1214 aa24.15■■□□□ 1.46
HLA-DQB1-204ENST00000399084 MROH1Q8NDA8 1641 aa24.15■■□□□ 1.46
HLA-DQB1-204ENST00000399084 COL17A1Q9UMD9 1497 aaPredicted RBP24.14■■□□□ 1.46
HLA-DQB1-204ENST00000399084 CCDC184Q52MB2 194 aa24.14■■□□□ 1.45
HLA-DQB1-204ENST00000399084 ERICH6BQ5W0A0 696 aa24.14■■□□□ 1.45
HLA-DQB1-204ENST00000399084 POLR3GLQ9BT43 218 aa24.14■■□□□ 1.45
HLA-DQB1-204ENST00000399084 TMF1P82094 1093 aa24.13■■□□□ 1.45
HLA-DQB1-204ENST00000399084 EFCAB6Q5THR3 1501 aa24.13■■□□□ 1.45
HLA-DQB1-204ENST00000399084 MADDQ8WXG6 1647 aa24.13■■□□□ 1.45
HLA-DQB1-204ENST00000399084 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
HLA-DQB1-204ENST00000399084 CLTCL1P53675 1640 aa24.12■■□□□ 1.45
HLA-DQB1-204ENST00000399084 TESK2Q96S53 571 aa24.12■■□□□ 1.45
HLA-DQB1-204ENST00000399084 BRD4O60885 1362 aaPredicted RBP24.11■■□□□ 1.45
HLA-DQB1-204ENST00000399084 FKBP8Q14318 412 aa24.11■■□□□ 1.45
HLA-DQB1-204ENST00000399084 FAM9BQ8IZU0 186 aa24.11■■□□□ 1.45
HLA-DQB1-204ENST00000399084 CDCA8Q53HL2 280 aa24.1■■□□□ 1.45
HLA-DQB1-204ENST00000399084 CYB5RLQ6IPT4 315 aa24.1■■□□□ 1.45
HLA-DQB1-204ENST00000399084 MYBBP1AQ9BQG0 1328 aaKnown RBP24.09■■□□□ 1.45
HLA-DQB1-204ENST00000399084 HECW2Q9P2P5 1572 aa24.09■■□□□ 1.45
HLA-DQB1-204ENST00000399084 MYOM2P54296 1465 aa24.07■■□□□ 1.44
HLA-DQB1-204ENST00000399084 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
HLA-DQB1-204ENST00000399084 TMC1Q8TDI8 760 aa24.05■■□□□ 1.44
HLA-DQB1-204ENST00000399084 IQGAP1P46940 1657 aa24.05■■□□□ 1.44
HLA-DQB1-204ENST00000399084 EIF3AQ14152 1382 aaKnown RBP24.04■■□□□ 1.44
HLA-DQB1-204ENST00000399084 KIF1BO60333 1816 aa24.03■■□□□ 1.44
HLA-DQB1-204ENST00000399084 PER1O15534 1290 aaPredicted RBP24.03■■□□□ 1.44
HLA-DQB1-204ENST00000399084 TRHP20396 242 aaPredicted RBP24.03■■□□□ 1.44
HLA-DQB1-204ENST00000399084 PNISRQ8TF01 805 aaKnown RBP24.03■■□□□ 1.44
HLA-DQB1-204ENST00000399084 PARD3Q8TEW0 1356 aa24.02■■□□□ 1.44
HLA-DQB1-204ENST00000399084 GLI2P10070 1586 aa24.01■■□□□ 1.43
HLA-DQB1-204ENST00000399084 INSRP06213 1382 aa24■■□□□ 1.43
HLA-DQB1-204ENST00000399084 PPRC1Q5VV67 1664 aaKnown RBP24■■□□□ 1.43
HLA-DQB1-204ENST00000399084 NLRP13Q86W25 1043 aa24■■□□□ 1.43
HLA-DQB1-204ENST00000399084 LRPPRCP42704 1394 aaKnown RBP23.98■■□□□ 1.43
HLA-DQB1-204ENST00000399084 DISP3Q9P2K9 1392 aa23.98■■□□□ 1.43
HLA-DQB1-204ENST00000399084 FRMPD1Q5SYB0 1578 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms