RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 L3MBTL2Q969R5 705 aa14.63□□□□□ -0.07
TMF1-201ENST00000398559 CSB-PGBD3P0DP91 1061 aa14.63□□□□□ -0.07
TMF1-201ENST00000398559 TAF7LQ5H9L4 462 aa14.63□□□□□ -0.07
TMF1-201ENST00000398559 FMN1Q68DA7 1419 aa14.62□□□□□ -0.07
TMF1-201ENST00000398559 DDX49Q9Y6V7 483 aaKnown RBP14.62□□□□□ -0.07
TMF1-201ENST00000398559 NACADO15069 1562 aa14.62□□□□□ -0.07
TMF1-201ENST00000398559 PLIN1O60240 522 aa14.61□□□□□ -0.07
TMF1-201ENST00000398559 KIF15Q9NS87 1388 aa14.61□□□□□ -0.07
TMF1-201ENST00000398559 TPM3P06753 285 aa14.61□□□□□ -0.07
TMF1-201ENST00000398559 ANKRD30AQ9BXX3 1397 aa14.61□□□□□ -0.07
TMF1-201ENST00000398559 SF3A1Q15459 793 aaKnown RBP14.6□□□□□ -0.07
TMF1-201ENST00000398559 RRP7AQ9Y3A4 280 aaKnown RBP14.6□□□□□ -0.07
TMF1-201ENST00000398559 PHLDB1Q86UU1 1377 aa14.6□□□□□ -0.07
TMF1-201ENST00000398559 CHMP4AQ9BY43 222 aa14.6□□□□□ -0.07
TMF1-201ENST00000398559 FOXD4L6Q3SYB3 417 aaPredicted RBP14.6□□□□□ -0.07
TMF1-201ENST00000398559 FOXD4L3Q6VB84 417 aaPredicted RBP14.6□□□□□ -0.07
TMF1-201ENST00000398559 EXOC6Q8TAG9 804 aa14.59□□□□□ -0.07
TMF1-201ENST00000398559 MYBBP1AQ9BQG0 1328 aaKnown RBP14.59□□□□□ -0.07
TMF1-201ENST00000398559 TERF2IPQ9NYB0 399 aa14.59□□□□□ -0.07
TMF1-201ENST00000398559 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
TMF1-201ENST00000398559 VSIG10Q8N0Z9 540 aa14.59□□□□□ -0.07
TMF1-201ENST00000398559 SKOR2Q2VWA4 1001 aaPredicted RBP14.58□□□□□ -0.07
TMF1-201ENST00000398559 CRBNQ96SW2 442 aa14.58□□□□□ -0.08
TMF1-201ENST00000398559 RILPL2Q969X0 211 aa14.58□□□□□ -0.08
TMF1-201ENST00000398559 ANKRD45Q5TZF3 282 aa14.58□□□□□ -0.08
TMF1-201ENST00000398559 H3BQV1 296 aa14.58□□□□□ -0.08
TMF1-201ENST00000398559 RRP1P56182 461 aaKnown RBP14.58□□□□□ -0.08
TMF1-201ENST00000398559 IFFO2Q5TF58 517 aa14.58□□□□□ -0.08
TMF1-201ENST00000398559 LMOD3Q0VAK6 560 aa14.58□□□□□ -0.08
TMF1-201ENST00000398559 BCL2L13Q9BXK5 485 aa14.57□□□□□ -0.08
TMF1-201ENST00000398559 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
TMF1-201ENST00000398559 GOLGA6L19H0YKK7 550 aa14.56□□□□□ -0.08
TMF1-201ENST00000398559 KIF3AQ9Y496 699 aa14.56□□□□□ -0.08
TMF1-201ENST00000398559 TOMM22Q9NS69 142 aa14.56□□□□□ -0.08
TMF1-201ENST00000398559 CCAR2Q8N163 923 aaKnown RBP14.55□□□□□ -0.08
TMF1-201ENST00000398559 PES1O00541 588 aaKnown RBP14.55□□□□□ -0.08
TMF1-201ENST00000398559 NUTM2DQ5VT03 806 aaPredicted RBP14.55□□□□□ -0.08
TMF1-201ENST00000398559 TPD52L1Q16890 204 aaPredicted RBP14.54□□□□□ -0.08
TMF1-201ENST00000398559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.54□□□□□ -0.08
TMF1-201ENST00000398559 FAM184AQ8NB25 1140 aa14.54□□□□□ -0.08
TMF1-201ENST00000398559 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
TMF1-201ENST00000398559 SETQ01105 290 aaPredicted RBP14.53□□□□□ -0.08
TMF1-201ENST00000398559 PANK3Q9H999 370 aa14.53□□□□□ -0.08
TMF1-201ENST00000398559 BECN2A8MW95 431 aa14.52□□□□□ -0.08
TMF1-201ENST00000398559 ZNF592Q92610 1267 aa14.52□□□□□ -0.08
TMF1-201ENST00000398559 FANCIQ9NVI1 1328 aa14.52□□□□□ -0.08
TMF1-201ENST00000398559 ZNF771Q7L3S4 317 aaPredicted RBP14.52□□□□□ -0.08
TMF1-201ENST00000398559 ATP6V1DQ9Y5K8 247 aa14.52□□□□□ -0.09
TMF1-201ENST00000398559 ZBED9Q6R2W3 1325 aa14.52□□□□□ -0.09
TMF1-201ENST00000398559 CCDC9Q9Y3X0 531 aaKnown RBP14.52□□□□□ -0.09
TMF1-201ENST00000398559 CEP89Q96ST8 783 aa14.52□□□□□ -0.09
TMF1-201ENST00000398559 CARMIL2Q6F5E8 1435 aa14.51□□□□□ -0.09
TMF1-201ENST00000398559 HNRNPMP52272 730 aaKnown RBP eCLIP14.51□□□□□ -0.09
TMF1-201ENST00000398559 PRM3Q9NNZ6 103 aa14.51□□□□□ -0.09
TMF1-201ENST00000398559 ELL2O00472 640 aaPredicted RBP14.51□□□□□ -0.09
TMF1-201ENST00000398559 AMPHP49418 695 aa14.51□□□□□ -0.09
TMF1-201ENST00000398559 ZKSCAN2Q63HK3 967 aa14.51□□□□□ -0.09
TMF1-201ENST00000398559 COG6Q9Y2V7 657 aa14.51□□□□□ -0.09
TMF1-201ENST00000398559 LTV1Q96GA3 475 aaPredicted RBP14.51□□□□□ -0.09
TMF1-201ENST00000398559 E9PSI1 815 aa14.5□□□□□ -0.09
TMF1-201ENST00000398559 TSR1Q2NL82 804 aaKnown RBP14.5□□□□□ -0.09
TMF1-201ENST00000398559 ST20-MTHFSA0A0A6YYL1 179 aa14.5□□□□□ -0.09
TMF1-201ENST00000398559 KIF3BO15066 747 aa14.49□□□□□ -0.09
TMF1-201ENST00000398559 MARCH6O60337 910 aa14.49□□□□□ -0.09
TMF1-201ENST00000398559 TMX4Q9H1E5 349 aaPredicted RBP14.49□□□□□ -0.09
TMF1-201ENST00000398559 EFCAB2Q5VUJ9 269 aa14.48□□□□□ -0.09
TMF1-201ENST00000398559 PRKRIP1Q9H875 184 aaPredicted RBP14.48□□□□□ -0.09
TMF1-201ENST00000398559 MCTP1Q6DN14 999 aa14.48□□□□□ -0.09
TMF1-201ENST00000398559 TRAK1Q9UPV9 953 aa14.48□□□□□ -0.09
TMF1-201ENST00000398559 VPS53Q5VIR6 699 aa14.48□□□□□ -0.09
TMF1-201ENST00000398559 NGDNQ8NEJ9 315 aaKnown RBP14.48□□□□□ -0.09
TMF1-201ENST00000398559 GPS2Q13227 327 aa14.47□□□□□ -0.09
TMF1-201ENST00000398559 ANO8Q9HCE9 1232 aaPredicted RBP14.47□□□□□ -0.09
TMF1-201ENST00000398559 DHX57Q6P158 1386 aaKnown RBP14.47□□□□□ -0.09
TMF1-201ENST00000398559 FAM13BQ9NYF5 915 aa14.47□□□□□ -0.09
TMF1-201ENST00000398559 TPM1P09493 284 aa14.46□□□□□ -0.09
TMF1-201ENST00000398559 FRAT2O75474 233 aaPredicted RBP14.46□□□□□ -0.09
TMF1-201ENST00000398559 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.09
TMF1-201ENST00000398559 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.1
TMF1-201ENST00000398559 DIAPH3Q9NSV4 1193 aa14.45□□□□□ -0.1
TMF1-201ENST00000398559 TPM2P07951 284 aa14.45□□□□□ -0.1
TMF1-201ENST00000398559 CCDC70Q6NSX1 233 aa14.45□□□□□ -0.1
TMF1-201ENST00000398559 CHMP5Q9NZZ3 219 aa14.45□□□□□ -0.1
TMF1-201ENST00000398559 NUTM2FA1L443 756 aa14.44□□□□□ -0.1
TMF1-201ENST00000398559 G3V3G9 751 aa14.44□□□□□ -0.1
TMF1-201ENST00000398559 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
TMF1-201ENST00000398559 FHOD3Q2V2M9 1422 aa14.44□□□□□ -0.1
TMF1-201ENST00000398559 AKAP17AQ02040 695 aaKnown RBP14.44□□□□□ -0.1
TMF1-201ENST00000398559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.43□□□□□ -0.1
TMF1-201ENST00000398559 CHMP4CQ96CF2 233 aa14.43□□□□□ -0.1
TMF1-201ENST00000398559 ANO2Q9NQ90 1003 aa14.43□□□□□ -0.1
TMF1-201ENST00000398559 REC8O95072 547 aa14.43□□□□□ -0.1
TMF1-201ENST00000398559 PATL2C9JE40 543 aaKnown RBP14.43□□□□□ -0.1
TMF1-201ENST00000398559 APAF1O14727 1248 aa14.42□□□□□ -0.1
TMF1-201ENST00000398559 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.42□□□□□ -0.1
TMF1-201ENST00000398559 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
TMF1-201ENST00000398559 CCDC18Q5T9S5 1454 aa14.42□□□□□ -0.1
TMF1-201ENST00000398559 CCDC144AA2RUR9 1427 aa14.41□□□□□ -0.1
TMF1-201ENST00000398559 USP47Q96K76 1375 aa14.41□□□□□ -0.1
TMF1-201ENST00000398559 RUFY2Q8WXA3 655 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms