RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 PHF14O94880 888 aa6.23□□□□□ -1.41
RPS4XP3-201ENST00000398541 PDIA6Q15084 440 aa6.23□□□□□ -1.41
RPS4XP3-201ENST00000398541 TYW1BQ6NUM6 668 aa6.22□□□□□ -1.41
RPS4XP3-201ENST00000398541 DDX12PQ92771 950 aa6.22□□□□□ -1.41
RPS4XP3-201ENST00000398541 ARIH1Q9Y4X5 557 aaPredicted RBP6.22□□□□□ -1.41
RPS4XP3-201ENST00000398541 SPDYE16A6NNV3 312 aaPredicted RBP6.21□□□□□ -1.42
RPS4XP3-201ENST00000398541 FBXW7Q969H0 707 aa6.21□□□□□ -1.42
RPS4XP3-201ENST00000398541 EPAS1Q99814 870 aa6.21□□□□□ -1.42
RPS4XP3-201ENST00000398541 KDM2AQ9Y2K7 1162 aa6.21□□□□□ -1.42
RPS4XP3-201ENST00000398541 HRO43593 1189 aa6.2□□□□□ -1.42
RPS4XP3-201ENST00000398541 VPS9D1Q9Y2B5 631 aa6.2□□□□□ -1.42
RPS4XP3-201ENST00000398541 ZBED2Q9BTP6 218 aa6.19□□□□□ -1.42
RPS4XP3-201ENST00000398541 SLC4A5Q9BY07 1137 aa6.19□□□□□ -1.42
RPS4XP3-201ENST00000398541 NBR1Q14596 966 aa6.18□□□□□ -1.42
RPS4XP3-201ENST00000398541 ERICH6Q7L0X2 663 aa6.18□□□□□ -1.42
RPS4XP3-201ENST00000398541 RBM33Q96EV2 1170 aaKnown RBP6.18□□□□□ -1.42
RPS4XP3-201ENST00000398541 STAC3Q96MF2 364 aa6.18□□□□□ -1.42
RPS4XP3-201ENST00000398541 PPP1R3GB7ZBB8 358 aa6.17□□□□□ -1.42
RPS4XP3-201ENST00000398541 COL9A1P20849 921 aa6.17□□□□□ -1.42
RPS4XP3-201ENST00000398541 C6orf132Q5T0Z8 1188 aa6.17□□□□□ -1.42
RPS4XP3-201ENST00000398541 GRXCR2A6NFK2 248 aa6.16□□□□□ -1.42
RPS4XP3-201ENST00000398541 KCNV2Q8TDN2 545 aa6.16□□□□□ -1.42
RPS4XP3-201ENST00000398541 MAP3K7O43318 606 aa6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 EN1Q05925 392 aaPredicted RBP6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 PROX2Q3B8N5 592 aa6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 ARHGEF1Q92888 912 aaKnown RBP6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 GTF3C3Q9Y5Q9 886 aa6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 BHMG1C9JSJ3 638 aaPredicted RBP6.14□□□□□ -1.43
RPS4XP3-201ENST00000398541 TSR1Q2NL82 804 aaKnown RBP6.13□□□□□ -1.43
RPS4XP3-201ENST00000398541 HOMEZQ8IX15 550 aa6.13□□□□□ -1.43
RPS4XP3-201ENST00000398541 KCTD12Q96CX2 325 aaKnown RBP6.13□□□□□ -1.43
RPS4XP3-201ENST00000398541 OSBPP22059 807 aa6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 PRIM1P49642 420 aaKnown RBP6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 P3H3Q8IVL6 736 aa6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 MRPL50Q8N5N7 158 aaKnown RBP6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 NBPF3Q9H094 633 aa6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 RABGEF1Q9UJ41 708 aa6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 KIAA1468Q9P260 1216 aa6.11□□□□□ -1.43
RPS4XP3-201ENST00000398541 HCSTQ9UBK5 93 aa6.11□□□□□ -1.43
RPS4XP3-201ENST00000398541 GOLGA8CPA6NN73 597 aa6.1□□□□□ -1.43
RPS4XP3-201ENST00000398541 TRIM6-TRIM34B2RNG4 842 aa6.1□□□□□ -1.43
RPS4XP3-201ENST00000398541 ONECUT3O60422 494 aaPredicted RBP6.09□□□□□ -1.43
RPS4XP3-201ENST00000398541 MLLT3P42568 568 aaPredicted RBP6.09□□□□□ -1.43
RPS4XP3-201ENST00000398541 WNT2BQ93097 391 aa6.08□□□□□ -1.44
RPS4XP3-201ENST00000398541 CDHR5Q9HBB8 845 aa6.08□□□□□ -1.44
RPS4XP3-201ENST00000398541 PTPN5P54829 565 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 THSD4Q6ZMP0 1018 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 LAPTM4BQ86VI4 370 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 PACS2Q86VP3 889 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 CERKQ8TCT0 537 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 CDCA7LQ96GN5 454 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 SEPT9Q9UHD8 586 aaPredicted RBP6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 TSKSQ9UJT2 592 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 SEMA3EO15041 775 aa6.06□□□□□ -1.44
RPS4XP3-201ENST00000398541 PRSS12P56730 875 aa6.06□□□□□ -1.44
RPS4XP3-201ENST00000398541 ANKK1Q8NFD2 765 aa6.05□□□□□ -1.44
RPS4XP3-201ENST00000398541 ZFRQ96KR1 1074 aaKnown RBP6.05□□□□□ -1.44
RPS4XP3-201ENST00000398541 FAM98CQ17RN3 349 aaKnown RBP6.04□□□□□ -1.44
RPS4XP3-201ENST00000398541 TMEM132AQ24JP5 1023 aa6.04□□□□□ -1.44
RPS4XP3-201ENST00000398541 NPDC1Q9NQX5 325 aaPredicted RBP6.04□□□□□ -1.44
RPS4XP3-201ENST00000398541 FAM198AQ9UFP1 575 aa6.04□□□□□ -1.44
RPS4XP3-201ENST00000398541 SOWAHBA6NEL2 793 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 C3orf80F5H4A9 247 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 SMAPO00193 183 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 BCAMP50895 628 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 PLA2G2EQ9NZK7 142 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 RBM27Q9P2N5 1060 aaKnown RBP6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 NUTM2FA1L443 756 aa6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 TESPA1A2RU30 521 aaPredicted RBP6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 NBPF26B4DH59 902 aa6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 TATDN2Q93075 761 aa6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 PNMA3Q9UL41 463 aa6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 PTGDRQ13258 359 aa6□□□□□ -1.45
RPS4XP3-201ENST00000398541 PADI6Q6TGC4 694 aa6□□□□□ -1.45
RPS4XP3-201ENST00000398541 NUDT18Q6ZVK8 323 aa6□□□□□ -1.45
RPS4XP3-201ENST00000398541 TTC13Q8NBP0 860 aa6□□□□□ -1.45
RPS4XP3-201ENST00000398541 C14orf37Q86TY3 774 aa5.99□□□□□ -1.45
RPS4XP3-201ENST00000398541 LRCH3Q96II8 777 aa5.99□□□□□ -1.45
RPS4XP3-201ENST00000398541 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.99□□□□□ -1.45
RPS4XP3-201ENST00000398541 SMYD5Q6GMV2 418 aa5.98□□□□□ -1.45
RPS4XP3-201ENST00000398541 SAMD7Q7Z3H4 446 aa5.98□□□□□ -1.45
RPS4XP3-201ENST00000398541 WBP1LQ9NX94 342 aa5.98□□□□□ -1.45
RPS4XP3-201ENST00000398541 RBM26Q5T8P6 1007 aaKnown RBP5.97□□□□□ -1.45
RPS4XP3-201ENST00000398541 TSR3Q9UJK0 312 aaKnown RBP5.97□□□□□ -1.45
RPS4XP3-201ENST00000398541 HPS5Q9UPZ3 1129 aa5.97□□□□□ -1.45
RPS4XP3-201ENST00000398541 FCHSD2O94868 740 aa5.96□□□□□ -1.46
RPS4XP3-201ENST00000398541 NYAP1Q6ZVC0 841 aa5.96□□□□□ -1.46
RPS4XP3-201ENST00000398541 HDGFP51858 240 aaKnown RBP5.95□□□□□ -1.46
RPS4XP3-201ENST00000398541 RANGAP1P46060 587 aaPredicted RBP5.94□□□□□ -1.46
RPS4XP3-201ENST00000398541 PPP4CP60510 307 aa5.94□□□□□ -1.46
RPS4XP3-201ENST00000398541 EYA1Q99502 592 aa5.94□□□□□ -1.46
RPS4XP3-201ENST00000398541 RNF40O75150 1001 aa5.93□□□□□ -1.46
RPS4XP3-201ENST00000398541 FAM161AQ3B820 660 aa5.93□□□□□ -1.46
RPS4XP3-201ENST00000398541 ADGRG1Q9Y653 693 aa5.93□□□□□ -1.46
RPS4XP3-201ENST00000398541 HIC1Q14526 733 aa5.92□□□□□ -1.46
RPS4XP3-201ENST00000398541 SWT1Q5T5J6 900 aaKnown RBP5.92□□□□□ -1.46
RPS4XP3-201ENST00000398541 IFFO2Q5TF58 517 aa5.92□□□□□ -1.46
RPS4XP3-201ENST00000398541 RBM46Q8TBY0 533 aaKnown RBP5.92□□□□□ -1.46
RPS4XP3-201ENST00000398541 ITGBL1O95965 494 aaPredicted RBP5.91□□□□□ -1.46
RPS4XP3-201ENST00000398541 GNPATO15228 680 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms