RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 CGNQ9P2M7 1197 aaKnown RBP15.87■□□□□ 0.13
CCBE1-201ENST00000398179 CPSF2Q9P2I0 782 aaKnown RBP15.87■□□□□ 0.13
CCBE1-201ENST00000398179 TERF2IPQ9NYB0 399 aa15.87■□□□□ 0.13
CCBE1-201ENST00000398179 WWC3Q9ULE0 1092 aa15.87■□□□□ 0.13
CCBE1-201ENST00000398179 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
CCBE1-201ENST00000398179 SWAP70Q9UH65 585 aa15.83■□□□□ 0.12
CCBE1-201ENST00000398179 INCENPQ9NQS7 918 aa15.82■□□□□ 0.12
CCBE1-201ENST00000398179 IL27Q8NEV9 243 aa15.82■□□□□ 0.12
CCBE1-201ENST00000398179 CWC22Q9HCG8 908 aaKnown RBP15.82■□□□□ 0.12
CCBE1-201ENST00000398179 CFAP53Q96M91 514 aa15.82■□□□□ 0.12
CCBE1-201ENST00000398179 RALBP1Q15311 655 aa15.81■□□□□ 0.12
CCBE1-201ENST00000398179 DCAF1Q9Y4B6 1507 aa15.81■□□□□ 0.12
CCBE1-201ENST00000398179 HMMRO75330 724 aa15.81■□□□□ 0.12
CCBE1-201ENST00000398179 TPM3P06753 285 aa15.81■□□□□ 0.12
CCBE1-201ENST00000398179 PUS7Q96PZ0 661 aaKnown RBP15.81■□□□□ 0.12
CCBE1-201ENST00000398179 TCHPQ9BT92 498 aa15.8■□□□□ 0.12
CCBE1-201ENST00000398179 RBM26Q5T8P6 1007 aaKnown RBP15.79■□□□□ 0.12
CCBE1-201ENST00000398179 CCDC91Q7Z6B0 441 aa15.79■□□□□ 0.12
CCBE1-201ENST00000398179 NPHP1O15259 732 aa15.78■□□□□ 0.12
CCBE1-201ENST00000398179 MIPOL1Q8TD10 442 aa15.78■□□□□ 0.12
CCBE1-201ENST00000398179 GTPBP4Q9BZE4 634 aaKnown RBP15.78■□□□□ 0.12
CCBE1-201ENST00000398179 SENP3-EIF4A1A0A087X0R7 540 aa15.78■□□□□ 0.12
CCBE1-201ENST00000398179 LEKR1Q6ZMV7 388 aa15.78■□□□□ 0.12
CCBE1-201ENST00000398179 TIGD1Q96MW7 591 aa15.77■□□□□ 0.12
CCBE1-201ENST00000398179 DNAI2Q9GZS0 605 aa15.77■□□□□ 0.12
CCBE1-201ENST00000398179 P3H3Q8IVL6 736 aa15.77■□□□□ 0.11
CCBE1-201ENST00000398179 ERICH4A6NGS2 130 aa15.77■□□□□ 0.11
CCBE1-201ENST00000398179 CT47A1Q5JQC4 288 aaPredicted RBP15.77■□□□□ 0.11
CCBE1-201ENST00000398179 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
CCBE1-201ENST00000398179 ARMCX6Q7L4S7 300 aa15.76■□□□□ 0.11
CCBE1-201ENST00000398179 RUFY1Q96T51 708 aa15.75■□□□□ 0.11
CCBE1-201ENST00000398179 LRCH2Q5VUJ6 765 aa15.75■□□□□ 0.11
CCBE1-201ENST00000398179 CREBRFQ8IUR6 639 aa15.75■□□□□ 0.11
CCBE1-201ENST00000398179 AK7Q96M32 723 aa15.75■□□□□ 0.11
CCBE1-201ENST00000398179 WDR66Q8TBY9 1149 aa15.74■□□□□ 0.11
CCBE1-201ENST00000398179 ZNHIT6Q9NWK9 470 aaKnown RBP15.74■□□□□ 0.11
CCBE1-201ENST00000398179 KIAA1328Q86T90 577 aa15.74■□□□□ 0.11
CCBE1-201ENST00000398179 HSCBQ8IWL3 235 aa15.73■□□□□ 0.11
CCBE1-201ENST00000398179 SMAP1Q8IYB5 467 aaPredicted RBP15.73■□□□□ 0.11
CCBE1-201ENST00000398179 GBP4Q96PP9 640 aa15.73■□□□□ 0.11
CCBE1-201ENST00000398179 RNF168Q8IYW5 571 aaPredicted RBP15.73■□□□□ 0.11
CCBE1-201ENST00000398179 ZHX1Q9UKY1 873 aaPredicted RBP15.73■□□□□ 0.11
CCBE1-201ENST00000398179 MYCBPQ99417 103 aaPredicted RBP15.73■□□□□ 0.11
CCBE1-201ENST00000398179 ACBD3Q9H3P7 528 aa15.72■□□□□ 0.11
CCBE1-201ENST00000398179 ARGLU1Q9NWB6 273 aaPredicted RBP15.72■□□□□ 0.11
CCBE1-201ENST00000398179 HSP90AB2PQ58FF8 381 aa15.71■□□□□ 0.11
CCBE1-201ENST00000398179 PDILTQ8N807 584 aa15.71■□□□□ 0.11
CCBE1-201ENST00000398179 DRC7Q8IY82 874 aa15.71■□□□□ 0.1
CCBE1-201ENST00000398179 RGS3P49796 1198 aa15.7■□□□□ 0.1
CCBE1-201ENST00000398179 CDR1P51861 262 aa15.7■□□□□ 0.1
CCBE1-201ENST00000398179 ENOX2Q16206 610 aaKnown RBP15.7■□□□□ 0.1
CCBE1-201ENST00000398179 FYB1O15117 783 aa15.69■□□□□ 0.1
CCBE1-201ENST00000398179 CEP120Q8N960 986 aa15.69■□□□□ 0.1
CCBE1-201ENST00000398179 NEXNQ0ZGT2 675 aa15.69■□□□□ 0.1
CCBE1-201ENST00000398179 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
CCBE1-201ENST00000398179 DIAPH3Q9NSV4 1193 aa15.69■□□□□ 0.1
CCBE1-201ENST00000398179 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
CCBE1-201ENST00000398179 STK31Q9BXU1 1019 aa15.68■□□□□ 0.1
CCBE1-201ENST00000398179 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCBE1-201ENST00000398179 KCNJ4P48050 445 aa15.68■□□□□ 0.1
CCBE1-201ENST00000398179 UIMC1Q96RL1 719 aa15.68■□□□□ 0.1
CCBE1-201ENST00000398179 PDCL2Q8N4E4 241 aa15.68■□□□□ 0.1
CCBE1-201ENST00000398179 SEPT11Q9NVA2 429 aaKnown RBP15.68■□□□□ 0.1
CCBE1-201ENST00000398179 SLC26A8Q96RN1 970 aa15.66■□□□□ 0.1
CCBE1-201ENST00000398179 MYO6Q9UM54 1294 aa15.66■□□□□ 0.1
CCBE1-201ENST00000398179 SRPK2P78362 688 aaKnown RBP15.66■□□□□ 0.1
CCBE1-201ENST00000398179 FAM107BQ9H098 131 aa15.66■□□□□ 0.1
CCBE1-201ENST00000398179 CCDC175P0C221 793 aa15.66■□□□□ 0.1
CCBE1-201ENST00000398179 FRMD4BQ9Y2L6 1034 aa15.66■□□□□ 0.1
CCBE1-201ENST00000398179 SH3BP5O60239 455 aa15.65■□□□□ 0.1
CCBE1-201ENST00000398179 ZRANB2O95218 330 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCBE1-201ENST00000398179 B4GALNT3Q6L9W6 998 aa15.65■□□□□ 0.1
CCBE1-201ENST00000398179 SECISBP2LQ93073 1101 aaKnown RBP15.64■□□□□ 0.09
CCBE1-201ENST00000398179 SYAP1Q96A49 352 aaPredicted RBP15.64■□□□□ 0.09
CCBE1-201ENST00000398179 CEP89Q96ST8 783 aa15.64■□□□□ 0.09
CCBE1-201ENST00000398179 DCTN1Q14203 1278 aa15.64■□□□□ 0.09
CCBE1-201ENST00000398179 ZMAT2Q96NC0 199 aaKnown RBP15.63■□□□□ 0.09
CCBE1-201ENST00000398179 CERS3Q8IU89 383 aa15.63■□□□□ 0.09
CCBE1-201ENST00000398179 GBP2P32456 591 aaPredicted RBP15.62■□□□□ 0.09
CCBE1-201ENST00000398179 PIK3R5Q8WYR1 880 aa15.62■□□□□ 0.09
CCBE1-201ENST00000398179 R3HCC1Q9Y3T6 440 aaKnown RBP15.62■□□□□ 0.09
CCBE1-201ENST00000398179 NF2P35240 595 aa15.62■□□□□ 0.09
CCBE1-201ENST00000398179 KDM4AO75164 1064 aa15.62■□□□□ 0.09
CCBE1-201ENST00000398179 HSPA5P11021 654 aaKnown RBP15.62■□□□□ 0.09
CCBE1-201ENST00000398179 KIF20AO95235 890 aa15.62■□□□□ 0.09
CCBE1-201ENST00000398179 PLEKHD1A6NEE1 506 aa15.61■□□□□ 0.09
CCBE1-201ENST00000398179 SOX12O15370 315 aa15.61■□□□□ 0.09
CCBE1-201ENST00000398179 NBPF6Q5VWK0 638 aa15.61■□□□□ 0.09
CCBE1-201ENST00000398179 NBPF5PQ86XG9 351 aaPredicted RBP15.61■□□□□ 0.09
CCBE1-201ENST00000398179 NBPF4Q96M43 638 aa15.61■□□□□ 0.09
CCBE1-201ENST00000398179 AP1ARQ63HQ0 302 aa15.61■□□□□ 0.09
CCBE1-201ENST00000398179 TAX1BP1Q86VP1 789 aa15.6■□□□□ 0.09
CCBE1-201ENST00000398179 TPM4P67936 248 aa15.6■□□□□ 0.09
CCBE1-201ENST00000398179 DDX11L8A8MPP1 907 aa15.6■□□□□ 0.09
CCBE1-201ENST00000398179 POLD1P28340 1107 aa15.59■□□□□ 0.09
CCBE1-201ENST00000398179 TRIM29Q14134 588 aa15.59■□□□□ 0.09
CCBE1-201ENST00000398179 LCA5Q86VQ0 697 aa15.59■□□□□ 0.09
CCBE1-201ENST00000398179 DDX12PQ92771 950 aa15.59■□□□□ 0.09
CCBE1-201ENST00000398179 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
CCBE1-201ENST00000398179 SKOR2Q2VWA4 1001 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms