RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 KIF3BO15066 747 aa7.76□□□□□ -1.17
PGBD4-201ENST00000397766 NOC3LQ8WTT2 800 aaKnown RBP7.75□□□□□ -1.17
PGBD4-201ENST00000397766 NGEFQ8N5V2 710 aa7.75□□□□□ -1.17
PGBD4-201ENST00000397766 DDX11L8A8MPP1 907 aa7.75□□□□□ -1.17
PGBD4-201ENST00000397766 IPO9Q96P70 1041 aaKnown RBP7.75□□□□□ -1.17
PGBD4-201ENST00000397766 CADPSQ9ULU8 1353 aa7.75□□□□□ -1.17
PGBD4-201ENST00000397766 MFAP1P55081 439 aaKnown RBP7.75□□□□□ -1.17
PGBD4-201ENST00000397766 WASHC2CQ9Y4E1 1318 aa7.74□□□□□ -1.17
PGBD4-201ENST00000397766 CCDC144AA2RUR9 1427 aa7.74□□□□□ -1.17
PGBD4-201ENST00000397766 TRIM6-TRIM34B2RNG4 842 aa7.74□□□□□ -1.17
PGBD4-201ENST00000397766 KIF16BQ96L93 1317 aa7.74□□□□□ -1.17
PGBD4-201ENST00000397766 FAM69CQ0P6D2 419 aa7.74□□□□□ -1.17
PGBD4-201ENST00000397766 RTN4Q9NQC3 1192 aaKnown RBP7.74□□□□□ -1.17
PGBD4-201ENST00000397766 TDRD9Q8NDG6 1382 aaKnown RBP7.74□□□□□ -1.17
PGBD4-201ENST00000397766 GOLGA6L1Q8N7Z2 621 aa7.74□□□□□ -1.17
PGBD4-201ENST00000397766 AMPHP49418 695 aa7.73□□□□□ -1.17
PGBD4-201ENST00000397766 NGDNQ8NEJ9 315 aaKnown RBP7.73□□□□□ -1.17
PGBD4-201ENST00000397766 LRRFIP1Q32MZ4 808 aaKnown RBP7.73□□□□□ -1.17
PGBD4-201ENST00000397766 CENPQQ7L2Z9 268 aaPredicted RBP7.73□□□□□ -1.17
PGBD4-201ENST00000397766 L3MBTL2Q969R5 705 aa7.73□□□□□ -1.17
PGBD4-201ENST00000397766 ATP6V1DQ9Y5K8 247 aa7.73□□□□□ -1.17
PGBD4-201ENST00000397766 CHMP3Q9Y3E7 222 aa7.73□□□□□ -1.17
PGBD4-201ENST00000397766 SKOR2Q2VWA4 1001 aaPredicted RBP7.72□□□□□ -1.17
PGBD4-201ENST00000397766 E9PSI1 815 aa7.72□□□□□ -1.17
PGBD4-201ENST00000397766 FHOD3Q2V2M9 1422 aa7.72□□□□□ -1.17
PGBD4-201ENST00000397766 ZNF330Q9Y3S2 320 aaPredicted RBP7.72□□□□□ -1.17
PGBD4-201ENST00000397766 CGNL1Q0VF96 1302 aa7.72□□□□□ -1.17
PGBD4-201ENST00000397766 EVC2Q86UK5 1308 aa7.72□□□□□ -1.17
PGBD4-201ENST00000397766 SF3B2Q13435 895 aaKnown RBP7.72□□□□□ -1.17
PGBD4-201ENST00000397766 RASSF8Q8NHQ8 419 aa7.72□□□□□ -1.17
PGBD4-201ENST00000397766 TPM3P06753 285 aa7.71□□□□□ -1.17
PGBD4-201ENST00000397766 HNRNPMP52272 730 aaKnown RBP eCLIP7.71□□□□□ -1.17
PGBD4-201ENST00000397766 VGFO15240 615 aaPredicted RBP7.71□□□□□ -1.17
PGBD4-201ENST00000397766 STAC3Q96MF2 364 aa7.71□□□□□ -1.17
PGBD4-201ENST00000397766 G3V3G9 751 aa7.71□□□□□ -1.18
PGBD4-201ENST00000397766 DCAF8Q5TAQ9 597 aa7.71□□□□□ -1.18
PGBD4-201ENST00000397766 SLKQ9H2G2 1235 aaPredicted RBP7.71□□□□□ -1.18
PGBD4-201ENST00000397766 ROCK1Q13464 1354 aa7.7□□□□□ -1.18
PGBD4-201ENST00000397766 COG3Q96JB2 828 aa7.7□□□□□ -1.18
PGBD4-201ENST00000397766 ZKSCAN2Q63HK3 967 aa7.7□□□□□ -1.18
PGBD4-201ENST00000397766 SLC4A10Q6U841 1118 aa7.7□□□□□ -1.18
PGBD4-201ENST00000397766 TPM2P07951 284 aa7.7□□□□□ -1.18
PGBD4-201ENST00000397766 C1orf141Q5JVX7 400 aa7.69□□□□□ -1.18
PGBD4-201ENST00000397766 AAMPQ13685 434 aa7.69□□□□□ -1.18
PGBD4-201ENST00000397766 CEP89Q96ST8 783 aa7.69□□□□□ -1.18
PGBD4-201ENST00000397766 FAM161AQ3B820 660 aa7.69□□□□□ -1.18
PGBD4-201ENST00000397766 CCDC146Q8IYE0 955 aa7.69□□□□□ -1.18
PGBD4-201ENST00000397766 RUFY2Q8WXA3 655 aa7.69□□□□□ -1.18
PGBD4-201ENST00000397766 SF3A1Q15459 793 aaKnown RBP7.68□□□□□ -1.18
PGBD4-201ENST00000397766 A0A0U1RQG5 324 aaPredicted RBP7.68□□□□□ -1.18
PGBD4-201ENST00000397766 H3BQV1 296 aa7.68□□□□□ -1.18
PGBD4-201ENST00000397766 IFFO2Q5TF58 517 aa7.68□□□□□ -1.18
PGBD4-201ENST00000397766 AMOTL1Q8IY63 956 aa7.68□□□□□ -1.18
PGBD4-201ENST00000397766 GZF1Q9H116 711 aaPredicted RBP7.68□□□□□ -1.18
PGBD4-201ENST00000397766 MARCH6O60337 910 aa7.67□□□□□ -1.18
PGBD4-201ENST00000397766 TPM1P09493 284 aa7.67□□□□□ -1.18
PGBD4-201ENST00000397766 SYNE3Q6ZMZ3 975 aa7.67□□□□□ -1.18
PGBD4-201ENST00000397766 ZBED9Q6R2W3 1325 aa7.67□□□□□ -1.18
PGBD4-201ENST00000397766 CUX1P39880 1505 aa7.67□□□□□ -1.18
PGBD4-201ENST00000397766 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.67□□□□□ -1.18
PGBD4-201ENST00000397766 API5Q9BZZ5 524 aaKnown RBP7.67□□□□□ -1.18
PGBD4-201ENST00000397766 AKAP17AQ02040 695 aaKnown RBP7.67□□□□□ -1.18
PGBD4-201ENST00000397766 TSR1Q2NL82 804 aaKnown RBP7.67□□□□□ -1.18
PGBD4-201ENST00000397766 PANK3Q9H999 370 aa7.67□□□□□ -1.18
PGBD4-201ENST00000397766 NCAPD3P42695 1498 aa7.67□□□□□ -1.18
PGBD4-201ENST00000397766 NEXNQ0ZGT2 675 aa7.67□□□□□ -1.18
PGBD4-201ENST00000397766 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.67□□□□□ -1.18
PGBD4-201ENST00000397766 JPH4Q96JJ6 628 aa7.66□□□□□ -1.18
PGBD4-201ENST00000397766 TOMM22Q9NS69 142 aa7.66□□□□□ -1.18
PGBD4-201ENST00000397766 DDX19BQ9UMR2 479 aa7.66□□□□□ -1.18
PGBD4-201ENST00000397766 FRAT2O75474 233 aaPredicted RBP7.66□□□□□ -1.18
PGBD4-201ENST00000397766 REC8O95072 547 aa7.66□□□□□ -1.18
PGBD4-201ENST00000397766 GTF2E1P29083 439 aaPredicted RBP7.66□□□□□ -1.18
PGBD4-201ENST00000397766 FAM184AQ8NB25 1140 aa7.66□□□□□ -1.18
PGBD4-201ENST00000397766 NOL10Q9BSC4 688 aaKnown RBP7.66□□□□□ -1.18
PGBD4-201ENST00000397766 DHX57Q6P158 1386 aaKnown RBP7.66□□□□□ -1.18
PGBD4-201ENST00000397766 PTPRGP23470 1445 aa7.66□□□□□ -1.18
PGBD4-201ENST00000397766 CCDC70Q6NSX1 233 aa7.66□□□□□ -1.18
PGBD4-201ENST00000397766 CPLX2Q6PUV4 134 aaKnown RBP7.66□□□□□ -1.18
PGBD4-201ENST00000397766 WWC1Q8IX03 1113 aa7.66□□□□□ -1.18
PGBD4-201ENST00000397766 CLUAP1Q96AJ1 413 aa7.66□□□□□ -1.18
PGBD4-201ENST00000397766 RRP1P56182 461 aaKnown RBP7.66□□□□□ -1.18
PGBD4-201ENST00000397766 CCDC47Q96A33 483 aaKnown RBP7.66□□□□□ -1.18
PGBD4-201ENST00000397766 USP47Q96K76 1375 aa7.65□□□□□ -1.18
PGBD4-201ENST00000397766 TPD52L1Q16890 204 aaPredicted RBP7.65□□□□□ -1.18
PGBD4-201ENST00000397766 TTC5Q8N0Z6 440 aa7.65□□□□□ -1.18
PGBD4-201ENST00000397766 DIAPH3Q9NSV4 1193 aa7.65□□□□□ -1.18
PGBD4-201ENST00000397766 TRAK1Q9UPV9 953 aa7.65□□□□□ -1.18
PGBD4-201ENST00000397766 MYOM3Q5VTT5 1437 aa7.65□□□□□ -1.18
PGBD4-201ENST00000397766 MSH5O43196 834 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 DDX58O95786 925 aaKnown RBP7.64□□□□□ -1.19
PGBD4-201ENST00000397766 ZKSCAN1P17029 563 aaPredicted RBP7.64□□□□□ -1.19
PGBD4-201ENST00000397766 TNNT3P45378 269 aaPredicted RBP7.64□□□□□ -1.19
PGBD4-201ENST00000397766 HSP90AB4PQ58FF6 505 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 FANCD2Q9BXW9 1451 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 ATAD2BQ9ULI0 1458 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 GOLGA6L19H0YKK7 550 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 GPS2Q13227 327 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 HOOK1Q9UJC3 728 aaKnown RBP7.64□□□□□ -1.19
PGBD4-201ENST00000397766 ST20-MTHFSA0A0A6YYL1 179 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms