RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 A2MP01023 1474 aa28.62■■■□□ 2.17
PDLIM2-205ENST00000397761 COL17A1Q9UMD9 1497 aaPredicted RBP28.61■■■□□ 2.17
PDLIM2-205ENST00000397761 RNF17Q9BXT8 1623 aaKnown RBP28.59■■■□□ 2.17
PDLIM2-205ENST00000397761 NUP155O75694 1391 aa28.58■■■□□ 2.17
PDLIM2-205ENST00000397761 FAM135AQ9P2D6 1515 aa28.58■■■□□ 2.17
PDLIM2-205ENST00000397761 MROH1Q8NDA8 1641 aa28.57■■■□□ 2.16
PDLIM2-205ENST00000397761 PRDM15P57071 1507 aaPredicted RBP28.55■■■□□ 2.16
PDLIM2-205ENST00000397761 MYT1LQ9UL68 1186 aa28.55■■■□□ 2.16
PDLIM2-205ENST00000397761 VWDEQ8N2E2 1590 aa28.55■■■□□ 2.16
PDLIM2-205ENST00000397761 REREQ9P2R6 1566 aa28.55■■■□□ 2.16
PDLIM2-205ENST00000397761 YEATS2Q9ULM3 1422 aa28.54■■■□□ 2.16
PDLIM2-205ENST00000397761 SLC4A1APQ9BWU0 796 aaKnown RBP28.53■■■□□ 2.16
PDLIM2-205ENST00000397761 ARHGEF40Q8TER5 1519 aa28.5■■■□□ 2.15
PDLIM2-205ENST00000397761 ANKRD30BQ9BXX2 1392 aa28.47■■■□□ 2.15
PDLIM2-205ENST00000397761 TET3O43151 1660 aa28.46■■■□□ 2.15
PDLIM2-205ENST00000397761 ATP10AO60312 1499 aa28.46■■■□□ 2.15
PDLIM2-205ENST00000397761 KIF3BO15066 747 aa28.43■■■□□ 2.14
PDLIM2-205ENST00000397761 AGLP35573 1532 aa28.42■■■□□ 2.14
PDLIM2-205ENST00000397761 PKD2Q13563 968 aa28.41■■■□□ 2.14
PDLIM2-205ENST00000397761 E9PCH4 1651 aa28.41■■■□□ 2.14
PDLIM2-205ENST00000397761 SIN3AQ96ST3 1273 aa28.4■■■□□ 2.14
PDLIM2-205ENST00000397761 LMTK2Q8IWU2 1503 aa28.4■■■□□ 2.14
PDLIM2-205ENST00000397761 CEP152O94986 1710 aa28.4■■■□□ 2.14
PDLIM2-205ENST00000397761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.39■■■□□ 2.13
PDLIM2-205ENST00000397761 SIGLEC1Q9BZZ2 1709 aa28.39■■■□□ 2.13
PDLIM2-205ENST00000397761 FOXD1Q16676 465 aa28.38■■■□□ 2.13
PDLIM2-205ENST00000397761 TIMELESSQ9UNS1 1208 aa28.38■■■□□ 2.13
PDLIM2-205ENST00000397761 KANK1Q14678 1352 aa28.37■■■□□ 2.13
PDLIM2-205ENST00000397761 ZC3H13Q5T200 1668 aaKnown RBP28.36■■■□□ 2.13
PDLIM2-205ENST00000397761 RPRD2Q5VT52 1461 aaKnown RBP28.35■■■□□ 2.13
PDLIM2-205ENST00000397761 EFCAB6Q5THR3 1501 aa28.33■■■□□ 2.13
PDLIM2-205ENST00000397761 SPHKAPQ2M3C7 1700 aa28.31■■■□□ 2.12
PDLIM2-205ENST00000397761 ABCC3O15438 1527 aa28.29■■■□□ 2.12
PDLIM2-205ENST00000397761 NEUROD1Q13562 356 aa28.29■■■□□ 2.12
PDLIM2-205ENST00000397761 PLA2R1Q13018 1463 aa28.29■■■□□ 2.12
PDLIM2-205ENST00000397761 CAMSAP1Q5T5Y3 1602 aa28.28■■■□□ 2.12
PDLIM2-205ENST00000397761 PTPRTO14522 1441 aa28.24■■■□□ 2.11
PDLIM2-205ENST00000397761 TRPM2O94759 1503 aa28.23■■■□□ 2.11
PDLIM2-205ENST00000397761 TONSLQ96HA7 1378 aa28.22■■■□□ 2.11
PDLIM2-205ENST00000397761 GGT6Q6P531 493 aa28.21■■■□□ 2.11
PDLIM2-205ENST00000397761 PPP6R1Q9UPN7 881 aa28.18■■■□□ 2.1
PDLIM2-205ENST00000397761 AEBP2Q6ZN18 517 aaPredicted RBP28.17■■■□□ 2.1
PDLIM2-205ENST00000397761 ARHGAP31Q2M1Z3 1444 aa28.17■■■□□ 2.1
PDLIM2-205ENST00000397761 CFAP65Q6ZU64 1925 aaKnown RBP28.16■■■□□ 2.1
PDLIM2-205ENST00000397761 CCDC144AA2RUR9 1427 aa28.16■■■□□ 2.1
PDLIM2-205ENST00000397761 WASHC2CQ9Y4E1 1318 aa28.15■■■□□ 2.1
PDLIM2-205ENST00000397761 NPATQ14207 1427 aa28.14■■■□□ 2.1
PDLIM2-205ENST00000397761 PPP1R15AO75807 674 aaPredicted RBP28.13■■■□□ 2.09
PDLIM2-205ENST00000397761 CLTCL1P53675 1640 aa28.13■■■□□ 2.09
PDLIM2-205ENST00000397761 CLTCQ00610 1675 aaKnown RBP28.12■■■□□ 2.09
PDLIM2-205ENST00000397761 NEURL4Q96JN8 1562 aa28.1■■■□□ 2.09
PDLIM2-205ENST00000397761 KDM4FA0A1W2PPD8 638 aa28.08■■■□□ 2.09
PDLIM2-205ENST00000397761 L3MBTL2Q969R5 705 aa28.08■■■□□ 2.09
PDLIM2-205ENST00000397761 KIF1BO60333 1816 aa28.08■■■□□ 2.08
PDLIM2-205ENST00000397761 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
PDLIM2-205ENST00000397761 NOS1P29475 1434 aa28.06■■■□□ 2.08
PDLIM2-205ENST00000397761 CNTLNQ9NXG0 1405 aa28.06■■■□□ 2.08
PDLIM2-205ENST00000397761 PIK3C2BO00750 1634 aa28.05■■■□□ 2.08
PDLIM2-205ENST00000397761 MROH2AA6NES4 1674 aa28.04■■■□□ 2.08
PDLIM2-205ENST00000397761 SPATA31E1Q6ZUB1 1445 aa28.03■■■□□ 2.08
PDLIM2-205ENST00000397761 SYNMO15061 1565 aa28.03■■■□□ 2.08
PDLIM2-205ENST00000397761 UGGT1Q9NYU2 1555 aa28■■■□□ 2.07
PDLIM2-205ENST00000397761 FER1L4A9Z1Z3 1794 aa27.95■■■□□ 2.07
PDLIM2-205ENST00000397761 UHRF1BP1Q6BDS2 1440 aa27.95■■■□□ 2.07
PDLIM2-205ENST00000397761 SPATA31D1Q6ZQQ2 1576 aa27.95■■■□□ 2.06
PDLIM2-205ENST00000397761 IFT172Q9UG01 1749 aa27.94■■■□□ 2.06
PDLIM2-205ENST00000397761 ADGRB3O60242 1522 aa27.93■■■□□ 2.06
PDLIM2-205ENST00000397761 ARID4BQ4LE39 1312 aaPredicted RBP27.93■■■□□ 2.06
PDLIM2-205ENST00000397761 ERVK-7P63135 1459 aa27.93■■■□□ 2.06
PDLIM2-205ENST00000397761 MLECQ14165 292 aa27.93■■■□□ 2.06
PDLIM2-205ENST00000397761 ZMYM3Q14202 1370 aa27.86■■■□□ 2.05
PDLIM2-205ENST00000397761 NBPF8Q3BBV2 869 aa27.86■■■□□ 2.05
PDLIM2-205ENST00000397761 MYO5BQ9ULV0 1848 aa27.86■■■□□ 2.05
PDLIM2-205ENST00000397761 PPLO60437 1756 aa27.85■■■□□ 2.05
PDLIM2-205ENST00000397761 C3P01024 1663 aa27.85■■■□□ 2.05
PDLIM2-205ENST00000397761 SLC52A1Q9NWF4 448 aa27.83■■■□□ 2.05
PDLIM2-205ENST00000397761 ADAMTSL3P82987 1691 aa27.83■■■□□ 2.05
PDLIM2-205ENST00000397761 DCAF11Q8TEB1 546 aa27.83■■■□□ 2.04
PDLIM2-205ENST00000397761 ESF1Q9H501 851 aaKnown RBP27.83■■■□□ 2.04
PDLIM2-205ENST00000397761 TMEM131LA2VDJ0 1609 aa27.82■■■□□ 2.04
PDLIM2-205ENST00000397761 TRPM1Q7Z4N2 1603 aa27.82■■■□□ 2.04
PDLIM2-205ENST00000397761 RGL3Q3MIN7 710 aa27.82■■■□□ 2.04
PDLIM2-205ENST00000397761 STAC3Q96MF2 364 aa27.82■■■□□ 2.04
PDLIM2-205ENST00000397761 MADDQ8WXG6 1647 aa27.81■■■□□ 2.04
PDLIM2-205ENST00000397761 PRAG1Q86YV5 1406 aa27.81■■■□□ 2.04
PDLIM2-205ENST00000397761 RALGAPBQ86X10 1494 aa27.8■■■□□ 2.04
PDLIM2-205ENST00000397761 FBXO31Q5XUX0 539 aaPredicted RBP27.8■■■□□ 2.04
PDLIM2-205ENST00000397761 ZNF316A6NFI3 1004 aaPredicted RBP27.78■■■□□ 2.04
PDLIM2-205ENST00000397761 MYOM2P54296 1465 aa27.78■■■□□ 2.04
PDLIM2-205ENST00000397761 KDM5AP29375 1690 aaKnown RBP27.77■■■□□ 2.04
PDLIM2-205ENST00000397761 IDI1Q13907 227 aa27.76■■■□□ 2.03
PDLIM2-205ENST00000397761 KIAA1210Q9ULL0 1709 aa27.75■■■□□ 2.03
PDLIM2-205ENST00000397761 RIMS1Q86UR5 1692 aaKnown RBP27.73■■■□□ 2.03
PDLIM2-205ENST00000397761 LAMC1P11047 1609 aa27.73■■■□□ 2.03
PDLIM2-205ENST00000397761 KDM2AQ9Y2K7 1162 aa27.73■■■□□ 2.03
PDLIM2-205ENST00000397761 NRXN1Q9ULB1 1477 aa27.73■■■□□ 2.03
PDLIM2-205ENST00000397761 NEXMIFQ5QGS0 1516 aa27.72■■■□□ 2.03
PDLIM2-205ENST00000397761 RPGRIP1LQ68CZ1 1315 aa27.71■■■□□ 2.03
PDLIM2-205ENST00000397761 TNRQ92752 1358 aa27.68■■■□□ 2.02
PDLIM2-205ENST00000397761 ZNF326Q5BKZ1 582 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms