RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
PDZD2-201ENST00000397559 OSBPP22059 807 aa13.21□□□□□ -0.29
PDZD2-201ENST00000397559 PTPREP23469 700 aa13.21□□□□□ -0.29
PDZD2-201ENST00000397559 KCNH8Q96L42 1107 aa13.21□□□□□ -0.29
PDZD2-201ENST00000397559 TESPA1A2RU30 521 aaPredicted RBP13.2□□□□□ -0.3
PDZD2-201ENST00000397559 MAP3K7O43318 606 aa13.2□□□□□ -0.3
PDZD2-201ENST00000397559 PRIM1P49642 420 aaKnown RBP13.2□□□□□ -0.3
PDZD2-201ENST00000397559 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
PDZD2-201ENST00000397559 CCDC180Q9P1Z9 1646 aa13.18□□□□□ -0.3
PDZD2-201ENST00000397559 C6orf132Q5T0Z8 1188 aa13.17□□□□□ -0.3
PDZD2-201ENST00000397559 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDZD2-201ENST00000397559 TSR1Q2NL82 804 aaKnown RBP13.16□□□□□ -0.3
PDZD2-201ENST00000397559 DMRTA1Q5VZB9 504 aa13.16□□□□□ -0.3
PDZD2-201ENST00000397559 ANKRD13DQ6ZTN6 518 aa13.16□□□□□ -0.3
PDZD2-201ENST00000397559 BCANQ96GW7 911 aa13.16□□□□□ -0.3
PDZD2-201ENST00000397559 SMYD5Q6GMV2 418 aa13.14□□□□□ -0.31
PDZD2-201ENST00000397559 COL9A1P20849 921 aa13.13□□□□□ -0.31
PDZD2-201ENST00000397559 PPP1R3GB7ZBB8 358 aa13.11□□□□□ -0.31
PDZD2-201ENST00000397559 CDHR5Q9HBB8 845 aa13.1□□□□□ -0.31
PDZD2-201ENST00000397559 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
PDZD2-201ENST00000397559 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
PDZD2-201ENST00000397559 ZBED2Q9BTP6 218 aa13.07□□□□□ -0.32
PDZD2-201ENST00000397559 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
PDZD2-201ENST00000397559 ADGRD1Q6QNK2 874 aa13.06□□□□□ -0.32
PDZD2-201ENST00000397559 TK2O00142 265 aa13.04□□□□□ -0.32
PDZD2-201ENST00000397559 PROX2Q3B8N5 592 aa13.04□□□□□ -0.32
PDZD2-201ENST00000397559 VPS9D1Q9Y2B5 631 aa13.04□□□□□ -0.32
PDZD2-201ENST00000397559 SLC4A5Q9BY07 1137 aa13.02□□□□□ -0.33
PDZD2-201ENST00000397559 SPNS2Q8IVW8 549 aa13.01□□□□□ -0.33
PDZD2-201ENST00000397559 CERKQ8TCT0 537 aa13.01□□□□□ -0.33
PDZD2-201ENST00000397559 NPDC1Q9NQX5 325 aaPredicted RBP13□□□□□ -0.33
PDZD2-201ENST00000397559 PTGDRQ13258 359 aa12.98□□□□□ -0.33
PDZD2-201ENST00000397559 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
PDZD2-201ENST00000397559 PRSS12P56730 875 aa12.97□□□□□ -0.33
PDZD2-201ENST00000397559 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
PDZD2-201ENST00000397559 HRO43593 1189 aa12.96□□□□□ -0.33
PDZD2-201ENST00000397559 GPIHBP1Q8IV16 184 aa12.96□□□□□ -0.33
PDZD2-201ENST00000397559 STAC3Q96MF2 364 aa12.96□□□□□ -0.33
PDZD2-201ENST00000397559 FCHSD2O94868 740 aa12.95□□□□□ -0.34
PDZD2-201ENST00000397559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDZD2-201ENST00000397559 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
PDZD2-201ENST00000397559 TSKSQ9UJT2 592 aa12.95□□□□□ -0.34
PDZD2-201ENST00000397559 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
PDZD2-201ENST00000397559 RABGEF1Q9UJ41 708 aa12.94□□□□□ -0.34
PDZD2-201ENST00000397559 PADI6Q6TGC4 694 aa12.93□□□□□ -0.34
PDZD2-201ENST00000397559 ONECUT3O60422 494 aaPredicted RBP12.92□□□□□ -0.34
PDZD2-201ENST00000397559 FAM198AQ9UFP1 575 aa12.92□□□□□ -0.34
PDZD2-201ENST00000397559 BHMG1C9JSJ3 638 aaPredicted RBP12.91□□□□□ -0.34
PDZD2-201ENST00000397559 PACS2Q86VP3 889 aa12.91□□□□□ -0.34
PDZD2-201ENST00000397559 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
PDZD2-201ENST00000397559 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
PDZD2-201ENST00000397559 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
PDZD2-201ENST00000397559 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
PDZD2-201ENST00000397559 GPR37O15354 613 aa12.89□□□□□ -0.35
PDZD2-201ENST00000397559 MMRN1Q13201 1228 aa12.88□□□□□ -0.35
PDZD2-201ENST00000397559 HIC1Q14526 733 aa12.88□□□□□ -0.35
PDZD2-201ENST00000397559 SEPT9Q9UHD8 586 aaPredicted RBP12.88□□□□□ -0.35
PDZD2-201ENST00000397559 SMAPO00193 183 aa12.86□□□□□ -0.35
PDZD2-201ENST00000397559 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
PDZD2-201ENST00000397559 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
PDZD2-201ENST00000397559 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
PDZD2-201ENST00000397559 C3orf80F5H4A9 247 aa12.85□□□□□ -0.35
PDZD2-201ENST00000397559 GNPATO15228 680 aa12.85□□□□□ -0.35
PDZD2-201ENST00000397559 GOLGA8CPA6NN73 597 aa12.84□□□□□ -0.35
PDZD2-201ENST00000397559 FECHP22830 423 aa12.84□□□□□ -0.35
PDZD2-201ENST00000397559 TATDN2Q93075 761 aa12.84□□□□□ -0.35
PDZD2-201ENST00000397559 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.36
PDZD2-201ENST00000397559 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
PDZD2-201ENST00000397559 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
PDZD2-201ENST00000397559 LAPTM4BQ86VI4 370 aa12.81□□□□□ -0.36
PDZD2-201ENST00000397559 FAM98CQ17RN3 349 aaKnown RBP12.8□□□□□ -0.36
PDZD2-201ENST00000397559 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
PDZD2-201ENST00000397559 WNT2BQ93097 391 aa12.78□□□□□ -0.36
PDZD2-201ENST00000397559 ZFRQ96KR1 1074 aaKnown RBP12.78□□□□□ -0.36
PDZD2-201ENST00000397559 ADGRG1Q9Y653 693 aa12.78□□□□□ -0.36
PDZD2-201ENST00000397559 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
PDZD2-201ENST00000397559 ANKK1Q8NFD2 765 aa12.75□□□□□ -0.37
PDZD2-201ENST00000397559 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
PDZD2-201ENST00000397559 EYA1Q99502 592 aa12.75□□□□□ -0.37
PDZD2-201ENST00000397559 OATP04181 439 aa12.71□□□□□ -0.37
PDZD2-201ENST00000397559 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
PDZD2-201ENST00000397559 ZMYND10O75800 440 aa12.7□□□□□ -0.38
PDZD2-201ENST00000397559 BCAMP50895 628 aa12.7□□□□□ -0.38
PDZD2-201ENST00000397559 THSD4Q6ZMP0 1018 aa12.7□□□□□ -0.38
PDZD2-201ENST00000397559 SAMD7Q7Z3H4 446 aa12.7□□□□□ -0.38
PDZD2-201ENST00000397559 PTPN5P54829 565 aa12.69□□□□□ -0.38
PDZD2-201ENST00000397559 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
PDZD2-201ENST00000397559 METTL3Q86U44 580 aaKnown RBP12.69□□□□□ -0.38
PDZD2-201ENST00000397559 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
PDZD2-201ENST00000397559 PXYLP1Q8TE99 480 aa12.69□□□□□ -0.38
PDZD2-201ENST00000397559 LRCH3Q96II8 777 aa12.69□□□□□ -0.38
PDZD2-201ENST00000397559 PRKCSHP14314 528 aaPredicted RBP12.68□□□□□ -0.38
PDZD2-201ENST00000397559 HDGFP51858 240 aaKnown RBP12.68□□□□□ -0.38
PDZD2-201ENST00000397559 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
PDZD2-201ENST00000397559 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
PDZD2-201ENST00000397559 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
PDZD2-201ENST00000397559 SOWAHBA6NEL2 793 aa12.67□□□□□ -0.38
PDZD2-201ENST00000397559 IRF6O14896 467 aa12.67□□□□□ -0.38
PDZD2-201ENST00000397559 DNAJB2P25686 324 aa12.67□□□□□ -0.38
PDZD2-201ENST00000397559 BARGINQ6ZT62 677 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms