RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 PZPP20742 1482 aa6.73□□□□□ -1.33
SSR1-202ENST00000397511 ANKRD50Q9ULJ7 1429 aa6.73□□□□□ -1.33
SSR1-202ENST00000397511 ROCK1Q13464 1354 aa6.73□□□□□ -1.33
SSR1-202ENST00000397511 ZBTB47Q9UFB7 747 aaPredicted RBP6.73□□□□□ -1.33
SSR1-202ENST00000397511 ANKRD30AQ9BXX3 1397 aa6.73□□□□□ -1.33
SSR1-202ENST00000397511 IPO9Q96P70 1041 aaKnown RBP6.72□□□□□ -1.33
SSR1-202ENST00000397511 DCAF8L1A6NGE4 600 aa6.72□□□□□ -1.33
SSR1-202ENST00000397511 CEP170Q5SW79 1584 aa6.72□□□□□ -1.33
SSR1-202ENST00000397511 ZBED9Q6R2W3 1325 aa6.72□□□□□ -1.33
SSR1-202ENST00000397511 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
SSR1-202ENST00000397511 SPATA31E1Q6ZUB1 1445 aa6.71□□□□□ -1.33
SSR1-202ENST00000397511 CC2D1BQ5T0F9 858 aaKnown RBP6.71□□□□□ -1.33
SSR1-202ENST00000397511 CARMIL2Q6F5E8 1435 aa6.71□□□□□ -1.34
SSR1-202ENST00000397511 KIAA1107Q9UPP5 1409 aa6.71□□□□□ -1.34
SSR1-202ENST00000397511 GLIPR1L2Q4G1C9 344 aa6.71□□□□□ -1.34
SSR1-202ENST00000397511 USP35Q9P2H5 1018 aa6.7□□□□□ -1.34
SSR1-202ENST00000397511 SYNJ2O15056 1496 aa6.7□□□□□ -1.34
SSR1-202ENST00000397511 KIF15Q9NS87 1388 aa6.7□□□□□ -1.34
SSR1-202ENST00000397511 BCORL1Q5H9F3 1711 aa6.7□□□□□ -1.34
SSR1-202ENST00000397511 C9orf84Q5VXU9 1444 aa6.7□□□□□ -1.34
SSR1-202ENST00000397511 ROCK2O75116 1388 aaKnown RBP6.69□□□□□ -1.34
SSR1-202ENST00000397511 DHX29Q7Z478 1369 aaKnown RBP6.69□□□□□ -1.34
SSR1-202ENST00000397511 PODXL2Q9NZ53 605 aa6.69□□□□□ -1.34
SSR1-202ENST00000397511 RSPH6AQ9H0K4 717 aa6.69□□□□□ -1.34
SSR1-202ENST00000397511 ATP10BO94823 1461 aa6.68□□□□□ -1.34
SSR1-202ENST00000397511 PNISRQ8TF01 805 aaKnown RBP6.68□□□□□ -1.34
SSR1-202ENST00000397511 WASHC2CQ9Y4E1 1318 aa6.68□□□□□ -1.34
SSR1-202ENST00000397511 TPRNQ4KMQ1 711 aa6.68□□□□□ -1.34
SSR1-202ENST00000397511 NUDCQ9Y266 331 aa6.67□□□□□ -1.34
SSR1-202ENST00000397511 PTPRGP23470 1445 aa6.67□□□□□ -1.34
SSR1-202ENST00000397511 PLIN1O60240 522 aa6.67□□□□□ -1.34
SSR1-202ENST00000397511 NPM2Q86SE8 214 aaKnown RBP6.67□□□□□ -1.34
SSR1-202ENST00000397511 CDCA7LQ96GN5 454 aa6.67□□□□□ -1.34
SSR1-202ENST00000397511 NEFMP07197 916 aa6.66□□□□□ -1.34
SSR1-202ENST00000397511 SKAP1Q86WV1 359 aa6.66□□□□□ -1.34
SSR1-202ENST00000397511 NUP160Q12769 1436 aa6.66□□□□□ -1.34
SSR1-202ENST00000397511 ITSN2Q9NZM3 1697 aa6.65□□□□□ -1.34
SSR1-202ENST00000397511 CDC42BPAQ5VT25 1732 aa6.65□□□□□ -1.34
SSR1-202ENST00000397511 CCDC144AA2RUR9 1427 aa6.64□□□□□ -1.35
SSR1-202ENST00000397511 PPM1GO15355 546 aaPredicted RBP6.64□□□□□ -1.35
SSR1-202ENST00000397511 EXOC6Q8TAG9 804 aa6.64□□□□□ -1.35
SSR1-202ENST00000397511 PANK3Q9H999 370 aa6.64□□□□□ -1.35
SSR1-202ENST00000397511 BRPF3Q9ULD4 1205 aa6.64□□□□□ -1.35
SSR1-202ENST00000397511 KDM5CP41229 1560 aa6.64□□□□□ -1.35
SSR1-202ENST00000397511 ADGBQ8N7X0 1667 aa6.64□□□□□ -1.35
SSR1-202ENST00000397511 PLEKHG5O94827 1062 aa6.63□□□□□ -1.35
SSR1-202ENST00000397511 MBD5Q9P267 1494 aa6.63□□□□□ -1.35
SSR1-202ENST00000397511 MYBBP1AQ9BQG0 1328 aaKnown RBP6.63□□□□□ -1.35
SSR1-202ENST00000397511 AFAP1Q8N556 730 aa6.63□□□□□ -1.35
SSR1-202ENST00000397511 ADGRL2O95490 1459 aa6.62□□□□□ -1.35
SSR1-202ENST00000397511 ABCC10Q5T3U5 1492 aa6.62□□□□□ -1.35
SSR1-202ENST00000397511 ARHGAP5Q13017 1502 aa6.62□□□□□ -1.35
SSR1-202ENST00000397511 SMG6Q86US8 1419 aaKnown RBP6.62□□□□□ -1.35
SSR1-202ENST00000397511 LAS1LQ9Y4W2 734 aaKnown RBP6.62□□□□□ -1.35
SSR1-202ENST00000397511 SYCP2Q9BX26 1530 aa6.62□□□□□ -1.35
SSR1-202ENST00000397511 DISP3Q9P2K9 1392 aa6.62□□□□□ -1.35
SSR1-202ENST00000397511 PLEKHH2Q8IVE3 1493 aa6.62□□□□□ -1.35
SSR1-202ENST00000397511 CROCC2H7BZ55 1655 aa6.61□□□□□ -1.35
SSR1-202ENST00000397511 GSE1Q14687 1217 aa6.61□□□□□ -1.35
SSR1-202ENST00000397511 RCAN3Q9UKA8 241 aa6.61□□□□□ -1.35
SSR1-202ENST00000397511 PLCB2Q00722 1185 aa6.61□□□□□ -1.35
SSR1-202ENST00000397511 KTN1Q86UP2 1357 aaKnown RBP6.61□□□□□ -1.35
SSR1-202ENST00000397511 RALGAPBQ86X10 1494 aa6.61□□□□□ -1.35
SSR1-202ENST00000397511 FAM135AQ9P2D6 1515 aa6.61□□□□□ -1.35
SSR1-202ENST00000397511 ABCA8O94911 1581 aa6.61□□□□□ -1.35
SSR1-202ENST00000397511 RALBP1Q15311 655 aa6.6□□□□□ -1.35
SSR1-202ENST00000397511 NLRP13Q86W25 1043 aa6.6□□□□□ -1.35
SSR1-202ENST00000397511 FAM43AQ8N2R8 423 aa6.6□□□□□ -1.35
SSR1-202ENST00000397511 ZMYND15Q9H091 742 aa6.6□□□□□ -1.35
SSR1-202ENST00000397511 SAMD9LQ8IVG5 1584 aa6.6□□□□□ -1.35
SSR1-202ENST00000397511 CCDC141Q6ZP82 1450 aa6.6□□□□□ -1.35
SSR1-202ENST00000397511 RRP1P56182 461 aaKnown RBP6.6□□□□□ -1.35
SSR1-202ENST00000397511 VSIG10Q8N0Z9 540 aa6.6□□□□□ -1.35
SSR1-202ENST00000397511 POLR1AO95602 1720 aaPredicted RBP6.6□□□□□ -1.35
SSR1-202ENST00000397511 SHROOM2Q13796 1616 aa6.6□□□□□ -1.35
SSR1-202ENST00000397511 ERCC6L2Q5T890 1561 aa6.6□□□□□ -1.35
SSR1-202ENST00000397511 PER1O15534 1290 aaPredicted RBP6.59□□□□□ -1.35
SSR1-202ENST00000397511 CCDC146Q8IYE0 955 aa6.59□□□□□ -1.35
SSR1-202ENST00000397511 CHGAP10645 457 aaKnown RBP6.59□□□□□ -1.35
SSR1-202ENST00000397511 TESK2Q96S53 571 aa6.59□□□□□ -1.35
SSR1-202ENST00000397511 ADAMTS8Q9UP79 889 aa6.59□□□□□ -1.35
SSR1-202ENST00000397511 ADCY10Q96PN6 1610 aa6.59□□□□□ -1.35
SSR1-202ENST00000397511 TNNT2P45379 298 aaPredicted RBP6.59□□□□□ -1.36
SSR1-202ENST00000397511 TMF1P82094 1093 aa6.59□□□□□ -1.36
SSR1-202ENST00000397511 CDC42BPBQ9Y5S2 1711 aa6.59□□□□□ -1.36
SSR1-202ENST00000397511 ARID4BQ4LE39 1312 aaPredicted RBP6.59□□□□□ -1.36
SSR1-202ENST00000397511 UHRF1BP1Q6BDS2 1440 aa6.58□□□□□ -1.36
SSR1-202ENST00000397511 PRAG1Q86YV5 1406 aa6.58□□□□□ -1.36
SSR1-202ENST00000397511 C20orf194Q5TEA3 1177 aa6.58□□□□□ -1.36
SSR1-202ENST00000397511 TTC37Q6PGP7 1564 aa6.58□□□□□ -1.36
SSR1-202ENST00000397511 PLA2R1Q13018 1463 aa6.58□□□□□ -1.36
SSR1-202ENST00000397511 BRD4O60885 1362 aaPredicted RBP6.58□□□□□ -1.36
SSR1-202ENST00000397511 CHD1O14646 1710 aa6.57□□□□□ -1.36
SSR1-202ENST00000397511 KNSTRNQ9Y448 316 aa6.57□□□□□ -1.36
SSR1-202ENST00000397511 A2MP01023 1474 aa6.57□□□□□ -1.36
SSR1-202ENST00000397511 NUTM2DQ5VT03 806 aaPredicted RBP6.57□□□□□ -1.36
SSR1-202ENST00000397511 KIF3BO15066 747 aa6.57□□□□□ -1.36
SSR1-202ENST00000397511 WDR43Q15061 677 aaKnown RBP eCLIP6.56□□□□□ -1.36
SSR1-202ENST00000397511 NEUROD2Q15784 382 aa6.56□□□□□ -1.36
SSR1-202ENST00000397511 RSPH4AQ5TD94 716 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms