RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PNISRQ8TF01 805 aaKnown RBP13.93□□□□□ -0.18
CPSF1P1-201ENST00000397477 MYBBP1AQ9BQG0 1328 aaKnown RBP13.92□□□□□ -0.18
CPSF1P1-201ENST00000397477 PLIN1O60240 522 aa13.92□□□□□ -0.18
CPSF1P1-201ENST00000397477 RALBP1Q15311 655 aa13.91□□□□□ -0.18
CPSF1P1-201ENST00000397477 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
CPSF1P1-201ENST00000397477 SAFB2Q14151 953 aaKnown RBP eCLIP13.91□□□□□ -0.18
CPSF1P1-201ENST00000397477 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
CPSF1P1-201ENST00000397477 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
CPSF1P1-201ENST00000397477 CCDC141Q6ZP82 1450 aa13.9□□□□□ -0.18
CPSF1P1-201ENST00000397477 NEUROD2Q15784 382 aa13.89□□□□□ -0.19
CPSF1P1-201ENST00000397477 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
CPSF1P1-201ENST00000397477 NBR1Q14596 966 aa13.87□□□□□ -0.19
CPSF1P1-201ENST00000397477 SPATA31E1Q6ZUB1 1445 aa13.87□□□□□ -0.19
CPSF1P1-201ENST00000397477 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
CPSF1P1-201ENST00000397477 SYCP2Q9BX26 1530 aa13.86□□□□□ -0.19
CPSF1P1-201ENST00000397477 EXOC6Q8TAG9 804 aa13.86□□□□□ -0.19
CPSF1P1-201ENST00000397477 DHX29Q7Z478 1369 aaKnown RBP13.85□□□□□ -0.19
CPSF1P1-201ENST00000397477 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
CPSF1P1-201ENST00000397477 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
CPSF1P1-201ENST00000397477 ITSN2Q9NZM3 1697 aa13.84□□□□□ -0.19
CPSF1P1-201ENST00000397477 ABCC10Q5T3U5 1492 aa13.83□□□□□ -0.2
CPSF1P1-201ENST00000397477 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.2
CPSF1P1-201ENST00000397477 KANK1Q14678 1352 aa13.83□□□□□ -0.2
CPSF1P1-201ENST00000397477 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
CPSF1P1-201ENST00000397477 DISP3Q9P2K9 1392 aa13.82□□□□□ -0.2
CPSF1P1-201ENST00000397477 ADGRL2O95490 1459 aa13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 CANXP27824 592 aaKnown RBP13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 STK26Q9P289 416 aa13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 ARID4BQ4LE39 1312 aaPredicted RBP13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 ADAMTS8Q9UP79 889 aa13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 TRAPPC8Q9Y2L5 1435 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 ERCC6L2Q5T890 1561 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 ABCA8O94911 1581 aa13.79□□□□□ -0.2
CPSF1P1-201ENST00000397477 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
CPSF1P1-201ENST00000397477 ERICH6BQ5W0A0 696 aa13.79□□□□□ -0.2
CPSF1P1-201ENST00000397477 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
CPSF1P1-201ENST00000397477 SKAP1Q86WV1 359 aa13.78□□□□□ -0.2
CPSF1P1-201ENST00000397477 MSH5O43196 834 aa13.78□□□□□ -0.2
CPSF1P1-201ENST00000397477 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
CPSF1P1-201ENST00000397477 BRD4O60885 1362 aaPredicted RBP13.77□□□□□ -0.21
CPSF1P1-201ENST00000397477 RALGAPBQ86X10 1494 aa13.77□□□□□ -0.21
CPSF1P1-201ENST00000397477 WASHC2CQ9Y4E1 1318 aa13.76□□□□□ -0.21
CPSF1P1-201ENST00000397477 TESK2Q96S53 571 aa13.76□□□□□ -0.21
CPSF1P1-201ENST00000397477 MLECQ14165 292 aa13.76□□□□□ -0.21
CPSF1P1-201ENST00000397477 ERBINQ96RT1 1412 aa13.75□□□□□ -0.21
CPSF1P1-201ENST00000397477 PRAG1Q86YV5 1406 aa13.75□□□□□ -0.21
CPSF1P1-201ENST00000397477 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
CPSF1P1-201ENST00000397477 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
CPSF1P1-201ENST00000397477 SMG6Q86US8 1419 aaKnown RBP13.74□□□□□ -0.21
CPSF1P1-201ENST00000397477 APAF1O14727 1248 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 CRBNQ96SW2 442 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 SHANK2Q9UPX8 1470 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 CDC42BPAQ5VT25 1732 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 RGS3P49796 1198 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 ADGRF5Q8IZF2 1346 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 CYB5RLQ6IPT4 315 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 MORC1Q86VD1 984 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 DAXXQ9UER7 740 aaPredicted RBP13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 PLCH2O75038 1416 aa13.71□□□□□ -0.21
CPSF1P1-201ENST00000397477 BCORL1Q5H9F3 1711 aa13.71□□□□□ -0.21
CPSF1P1-201ENST00000397477 A2MP01023 1474 aa13.71□□□□□ -0.21
CPSF1P1-201ENST00000397477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.71□□□□□ -0.22
CPSF1P1-201ENST00000397477 ADGBQ8N7X0 1667 aa13.7□□□□□ -0.22
CPSF1P1-201ENST00000397477 TTC37Q6PGP7 1564 aa13.7□□□□□ -0.22
CPSF1P1-201ENST00000397477 UHRF1BP1Q6BDS2 1440 aa13.7□□□□□ -0.22
CPSF1P1-201ENST00000397477 PPM1GO15355 546 aaPredicted RBP13.7□□□□□ -0.22
CPSF1P1-201ENST00000397477 RTL5Q5HYW3 569 aaPredicted RBP13.69□□□□□ -0.22
CPSF1P1-201ENST00000397477 PLA2R1Q13018 1463 aa13.69□□□□□ -0.22
CPSF1P1-201ENST00000397477 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
CPSF1P1-201ENST00000397477 ARHGEF12Q9NZN5 1544 aa13.69□□□□□ -0.22
CPSF1P1-201ENST00000397477 NOP58Q9Y2X3 529 aaKnown RBP13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 SRPK2P78362 688 aaKnown RBP13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 C20orf194Q5TEA3 1177 aa13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
CPSF1P1-201ENST00000397477 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
CPSF1P1-201ENST00000397477 ABCC2Q92887 1545 aa13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 KDM5CP41229 1560 aa13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 POGKQ9P215 609 aa13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 CHD1O14646 1710 aa13.65□□□□□ -0.22
CPSF1P1-201ENST00000397477 FANCAO15360 1455 aa13.65□□□□□ -0.22
CPSF1P1-201ENST00000397477 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.22
CPSF1P1-201ENST00000397477 PAK3O75914 559 aaPredicted RBP13.65□□□□□ -0.22
CPSF1P1-201ENST00000397477 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
CPSF1P1-201ENST00000397477 ADGRL1O94910 1474 aa13.64□□□□□ -0.23
CPSF1P1-201ENST00000397477 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
CPSF1P1-201ENST00000397477 ADCY10Q96PN6 1610 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms