RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 PZPP20742 1482 aa27.77■■■□□ 2.04
TSPAN4-204ENST00000397404 REREQ9P2R6 1566 aa27.77■■■□□ 2.04
TSPAN4-204ENST00000397404 IQGAP3Q86VI3 1631 aa27.76■■■□□ 2.03
TSPAN4-204ENST00000397404 ABCA6Q8N139 1617 aa27.76■■■□□ 2.03
TSPAN4-204ENST00000397404 DIP2CQ9Y2E4 1556 aa27.75■■■□□ 2.03
TSPAN4-204ENST00000397404 TRHP20396 242 aaPredicted RBP27.74■■■□□ 2.03
TSPAN4-204ENST00000397404 KANK1Q14678 1352 aa27.73■■■□□ 2.03
TSPAN4-204ENST00000397404 FAM135AQ9P2D6 1515 aa27.73■■■□□ 2.03
TSPAN4-204ENST00000397404 RNF17Q9BXT8 1623 aaKnown RBP27.71■■■□□ 2.03
TSPAN4-204ENST00000397404 PRDM15P57071 1507 aaPredicted RBP27.71■■■□□ 2.03
TSPAN4-204ENST00000397404 ATP10AO60312 1499 aa27.7■■■□□ 2.02
TSPAN4-204ENST00000397404 VWDEQ8N2E2 1590 aa27.67■■■□□ 2.02
TSPAN4-204ENST00000397404 KIF3BO15066 747 aa27.65■■■□□ 2.02
TSPAN4-204ENST00000397404 ARHGEF40Q8TER5 1519 aa27.65■■■□□ 2.02
TSPAN4-204ENST00000397404 AGLP35573 1532 aa27.64■■■□□ 2.02
TSPAN4-204ENST00000397404 COL17A1Q9UMD9 1497 aaPredicted RBP27.64■■■□□ 2.02
TSPAN4-204ENST00000397404 ANKRD30BQ9BXX2 1392 aa27.64■■■□□ 2.01
TSPAN4-204ENST00000397404 LMTK2Q8IWU2 1503 aa27.62■■■□□ 2.01
TSPAN4-204ENST00000397404 YEATS2Q9ULM3 1422 aa27.62■■■□□ 2.01
TSPAN4-204ENST00000397404 PKD2Q13563 968 aa27.62■■■□□ 2.01
TSPAN4-204ENST00000397404 PPP6R1Q9UPN7 881 aa27.61■■■□□ 2.01
TSPAN4-204ENST00000397404 TET3O43151 1660 aa27.59■■■□□ 2.01
TSPAN4-204ENST00000397404 MROH1Q8NDA8 1641 aa27.58■■■□□ 2.01
TSPAN4-204ENST00000397404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.57■■■□□ 2
TSPAN4-204ENST00000397404 ZC3H13Q5T200 1668 aaKnown RBP27.55■■■□□ 2
TSPAN4-204ENST00000397404 RPRD2Q5VT52 1461 aaKnown RBP27.53■■■□□ 2
TSPAN4-204ENST00000397404 TONSLQ96HA7 1378 aa27.51■■□□□ 1.99
TSPAN4-204ENST00000397404 EFCAB6Q5THR3 1501 aa27.48■■□□□ 1.99
TSPAN4-204ENST00000397404 SIN3AQ96ST3 1273 aa27.47■■□□□ 1.99
TSPAN4-204ENST00000397404 NEUROD1Q13562 356 aa27.45■■□□□ 1.99
TSPAN4-204ENST00000397404 ABCC3O15438 1527 aa27.44■■□□□ 1.98
TSPAN4-204ENST00000397404 ARHGAP31Q2M1Z3 1444 aa27.44■■□□□ 1.98
TSPAN4-204ENST00000397404 E9PCH4 1651 aa27.44■■□□□ 1.98
TSPAN4-204ENST00000397404 GGT6Q6P531 493 aa27.44■■□□□ 1.98
TSPAN4-204ENST00000397404 CCDC144AA2RUR9 1427 aa27.43■■□□□ 1.98
TSPAN4-204ENST00000397404 PTPRTO14522 1441 aa27.43■■□□□ 1.98
TSPAN4-204ENST00000397404 WASHC2CQ9Y4E1 1318 aa27.43■■□□□ 1.98
TSPAN4-204ENST00000397404 FOXD1Q16676 465 aa27.43■■□□□ 1.98
TSPAN4-204ENST00000397404 TRPM2O94759 1503 aa27.4■■□□□ 1.98
TSPAN4-204ENST00000397404 SPHKAPQ2M3C7 1700 aa27.38■■□□□ 1.97
TSPAN4-204ENST00000397404 CEP152O94986 1710 aa27.38■■□□□ 1.97
TSPAN4-204ENST00000397404 CAMSAP1Q5T5Y3 1602 aa27.37■■□□□ 1.97
TSPAN4-204ENST00000397404 NEURL4Q96JN8 1562 aa27.36■■□□□ 1.97
TSPAN4-204ENST00000397404 PLA2R1Q13018 1463 aa27.36■■□□□ 1.97
TSPAN4-204ENST00000397404 CNTLNQ9NXG0 1405 aa27.34■■□□□ 1.97
TSPAN4-204ENST00000397404 PPP1R15AO75807 674 aaPredicted RBP27.33■■□□□ 1.97
TSPAN4-204ENST00000397404 NPATQ14207 1427 aa27.32■■□□□ 1.96
TSPAN4-204ENST00000397404 STAC3Q96MF2 364 aa27.31■■□□□ 1.96
TSPAN4-204ENST00000397404 ESF1Q9H501 851 aaKnown RBP27.26■■□□□ 1.95
TSPAN4-204ENST00000397404 NOS1P29475 1434 aa27.26■■□□□ 1.95
TSPAN4-204ENST00000397404 SIGLEC1Q9BZZ2 1709 aa27.25■■□□□ 1.95
TSPAN4-204ENST00000397404 L3MBTL2Q969R5 705 aa27.24■■□□□ 1.95
TSPAN4-204ENST00000397404 ARID4BQ4LE39 1312 aaPredicted RBP27.23■■□□□ 1.95
TSPAN4-204ENST00000397404 MROH2AA6NES4 1674 aa27.21■■□□□ 1.95
TSPAN4-204ENST00000397404 SLC52A1Q9NWF4 448 aa27.2■■□□□ 1.95
TSPAN4-204ENST00000397404 CLTCL1P53675 1640 aa27.18■■□□□ 1.94
TSPAN4-204ENST00000397404 CLTCQ00610 1675 aaKnown RBP27.18■■□□□ 1.94
TSPAN4-204ENST00000397404 SPATA31E1Q6ZUB1 1445 aa27.18■■□□□ 1.94
TSPAN4-204ENST00000397404 UHRF1BP1Q6BDS2 1440 aa27.17■■□□□ 1.94
TSPAN4-204ENST00000397404 KIF1BO60333 1816 aa27.16■■□□□ 1.94
TSPAN4-204ENST00000397404 PREX1Q8TCU6 1659 aa27.15■■□□□ 1.94
TSPAN4-204ENST00000397404 PIK3C2BO00750 1634 aa27.14■■□□□ 1.94
TSPAN4-204ENST00000397404 ERVK-7P63135 1459 aa27.12■■□□□ 1.93
TSPAN4-204ENST00000397404 SPATA31D1Q6ZQQ2 1576 aa27.12■■□□□ 1.93
TSPAN4-204ENST00000397404 ZMYM3Q14202 1370 aa27.1■■□□□ 1.93
TSPAN4-204ENST00000397404 MLECQ14165 292 aa27.1■■□□□ 1.93
TSPAN4-204ENST00000397404 SYNMO15061 1565 aa27.09■■□□□ 1.93
TSPAN4-204ENST00000397404 ADGRB3O60242 1522 aa27.09■■□□□ 1.93
TSPAN4-204ENST00000397404 RPGRIP1LQ68CZ1 1315 aa27.08■■□□□ 1.93
TSPAN4-204ENST00000397404 DCAF11Q8TEB1 546 aa27.06■■□□□ 1.92
TSPAN4-204ENST00000397404 FER1L4A9Z1Z3 1794 aa27.04■■□□□ 1.92
TSPAN4-204ENST00000397404 CFAP65Q6ZU64 1925 aaKnown RBP27.03■■□□□ 1.92
TSPAN4-204ENST00000397404 MYOM2P54296 1465 aa27.02■■□□□ 1.92
TSPAN4-204ENST00000397404 ZNF316A6NFI3 1004 aaPredicted RBP27.01■■□□□ 1.91
TSPAN4-204ENST00000397404 PRAG1Q86YV5 1406 aa27.01■■□□□ 1.91
TSPAN4-204ENST00000397404 RGL3Q3MIN7 710 aa27■■□□□ 1.91
TSPAN4-204ENST00000397404 RALGAPBQ86X10 1494 aa27■■□□□ 1.91
TSPAN4-204ENST00000397404 UGGT1Q9NYU2 1555 aa27■■□□□ 1.91
TSPAN4-204ENST00000397404 KDM5AP29375 1690 aaKnown RBP26.98■■□□□ 1.91
TSPAN4-204ENST00000397404 IDI1Q13907 227 aa26.96■■□□□ 1.91
TSPAN4-204ENST00000397404 IFT172Q9UG01 1749 aa26.96■■□□□ 1.91
TSPAN4-204ENST00000397404 NLRP1Q9C000 1473 aa26.94■■□□□ 1.9
TSPAN4-204ENST00000397404 NBPF8Q3BBV2 869 aa26.94■■□□□ 1.9
TSPAN4-204ENST00000397404 TNRQ92752 1358 aa26.94■■□□□ 1.9
TSPAN4-204ENST00000397404 ADAMTSL3P82987 1691 aa26.93■■□□□ 1.9
TSPAN4-204ENST00000397404 ZFYVE9O95405 1425 aa26.93■■□□□ 1.9
TSPAN4-204ENST00000397404 FBXO31Q5XUX0 539 aaPredicted RBP26.93■■□□□ 1.9
TSPAN4-204ENST00000397404 TMEM131LA2VDJ0 1609 aa26.93■■□□□ 1.9
TSPAN4-204ENST00000397404 KDM2AQ9Y2K7 1162 aa26.92■■□□□ 1.9
TSPAN4-204ENST00000397404 KIAA1210Q9ULL0 1709 aa26.92■■□□□ 1.9
TSPAN4-204ENST00000397404 LAMC1P11047 1609 aa26.91■■□□□ 1.9
TSPAN4-204ENST00000397404 C3P01024 1663 aa26.91■■□□□ 1.9
TSPAN4-204ENST00000397404 ZNF326Q5BKZ1 582 aaKnown RBP26.91■■□□□ 1.9
TSPAN4-204ENST00000397404 NRXN1Q9ULB1 1477 aa26.91■■□□□ 1.9
TSPAN4-204ENST00000397404 MADDQ8WXG6 1647 aa26.91■■□□□ 1.9
TSPAN4-204ENST00000397404 EIF4G2P78344 907 aaKnown RBP eCLIP26.9■■□□□ 1.9
TSPAN4-204ENST00000397404 GPRASP1Q5JY77 1395 aa26.9■■□□□ 1.9
TSPAN4-204ENST00000397404 TRPM1Q7Z4N2 1603 aa26.9■■□□□ 1.9
TSPAN4-204ENST00000397404 PPLO60437 1756 aa26.9■■□□□ 1.9
TSPAN4-204ENST00000397404 VGFO15240 615 aaPredicted RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms