RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 NLRP13Q86W25 1043 aa12.36□□□□□ -0.43
UCA1-201ENST00000397381 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
UCA1-201ENST00000397381 NEFMP07197 916 aa12.36□□□□□ -0.43
UCA1-201ENST00000397381 ANKRD50Q9ULJ7 1429 aa12.36□□□□□ -0.43
UCA1-201ENST00000397381 PARD3Q8TEW0 1356 aa12.35□□□□□ -0.43
UCA1-201ENST00000397381 WASHC2CQ9Y4E1 1318 aa12.35□□□□□ -0.43
UCA1-201ENST00000397381 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
UCA1-201ENST00000397381 SHANK2Q9UPX8 1470 aa12.35□□□□□ -0.43
UCA1-201ENST00000397381 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
UCA1-201ENST00000397381 PRG4Q92954 1404 aaPredicted RBP12.34□□□□□ -0.43
UCA1-201ENST00000397381 ST20-MTHFSA0A0A6YYL1 179 aa12.34□□□□□ -0.43
UCA1-201ENST00000397381 PLEKHH2Q8IVE3 1493 aa12.32□□□□□ -0.44
UCA1-201ENST00000397381 SENP3-EIF4A1A0A087X0R7 540 aa12.32□□□□□ -0.44
UCA1-201ENST00000397381 LAS1LQ9Y4W2 734 aaKnown RBP12.32□□□□□ -0.44
UCA1-201ENST00000397381 NUP155O75694 1391 aa12.31□□□□□ -0.44
UCA1-201ENST00000397381 BLMP54132 1417 aaPredicted RBP12.31□□□□□ -0.44
UCA1-201ENST00000397381 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
UCA1-201ENST00000397381 IL27Q8NEV9 243 aa12.3□□□□□ -0.44
UCA1-201ENST00000397381 PTPRGP23470 1445 aa12.3□□□□□ -0.44
UCA1-201ENST00000397381 CDC42BPAQ5VT25 1732 aa12.29□□□□□ -0.44
UCA1-201ENST00000397381 TRPM1Q7Z4N2 1603 aa12.29□□□□□ -0.44
UCA1-201ENST00000397381 LAMC1P11047 1609 aa12.29□□□□□ -0.44
UCA1-201ENST00000397381 C9orf84Q5VXU9 1444 aa12.29□□□□□ -0.44
UCA1-201ENST00000397381 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.44
UCA1-201ENST00000397381 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.45
UCA1-201ENST00000397381 DCAF11Q8TEB1 546 aa12.27□□□□□ -0.45
UCA1-201ENST00000397381 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
UCA1-201ENST00000397381 IFT140Q96RY7 1462 aa12.27□□□□□ -0.45
UCA1-201ENST00000397381 KDM2AQ9Y2K7 1162 aa12.26□□□□□ -0.45
UCA1-201ENST00000397381 GRIN2AQ12879 1464 aa12.26□□□□□ -0.45
UCA1-201ENST00000397381 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
UCA1-201ENST00000397381 CRBNQ96SW2 442 aa12.26□□□□□ -0.45
UCA1-201ENST00000397381 PRAG1Q86YV5 1406 aa12.26□□□□□ -0.45
UCA1-201ENST00000397381 EIF4G3O43432 1585 aaKnown RBP12.25□□□□□ -0.45
UCA1-201ENST00000397381 COL17A1Q9UMD9 1497 aaPredicted RBP12.25□□□□□ -0.45
UCA1-201ENST00000397381 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
UCA1-201ENST00000397381 GPRASP1Q5JY77 1395 aa12.25□□□□□ -0.45
UCA1-201ENST00000397381 SALL2Q9Y467 1007 aaPredicted RBP12.25□□□□□ -0.45
UCA1-201ENST00000397381 ARHGEF5Q12774 1597 aa12.25□□□□□ -0.45
UCA1-201ENST00000397381 GSE1Q14687 1217 aa12.24□□□□□ -0.45
UCA1-201ENST00000397381 ZNF608Q9ULD9 1512 aaPredicted RBP12.24□□□□□ -0.45
UCA1-201ENST00000397381 ABCC10Q5T3U5 1492 aa12.23□□□□□ -0.45
UCA1-201ENST00000397381 CENPQQ7L2Z9 268 aaPredicted RBP12.23□□□□□ -0.45
UCA1-201ENST00000397381 PLB1Q6P1J6 1458 aa12.23□□□□□ -0.45
UCA1-201ENST00000397381 KDM2BQ8NHM5 1336 aa12.23□□□□□ -0.45
UCA1-201ENST00000397381 TSPY4P0CV99 314 aa12.22□□□□□ -0.45
UCA1-201ENST00000397381 TSPY10P0CW01 314 aa12.22□□□□□ -0.45
UCA1-201ENST00000397381 PRDM15P57071 1507 aaPredicted RBP12.22□□□□□ -0.45
UCA1-201ENST00000397381 PLIN1O60240 522 aa12.22□□□□□ -0.45
UCA1-201ENST00000397381 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
UCA1-201ENST00000397381 EIF2AK4Q9P2K8 1649 aaKnown RBP12.21□□□□□ -0.45
UCA1-201ENST00000397381 FAM135AQ9P2D6 1515 aa12.21□□□□□ -0.45
UCA1-201ENST00000397381 NFKBIBQ15653 356 aa12.21□□□□□ -0.46
UCA1-201ENST00000397381 CCDC144AA2RUR9 1427 aa12.2□□□□□ -0.46
UCA1-201ENST00000397381 CARMIL2Q6F5E8 1435 aa12.2□□□□□ -0.46
UCA1-201ENST00000397381 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
UCA1-201ENST00000397381 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
UCA1-201ENST00000397381 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
UCA1-201ENST00000397381 ERBINQ96RT1 1412 aa12.19□□□□□ -0.46
UCA1-201ENST00000397381 PLEKHD1A6NEE1 506 aa12.18□□□□□ -0.46
UCA1-201ENST00000397381 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.18□□□□□ -0.46
UCA1-201ENST00000397381 ABCA8O94911 1581 aa12.18□□□□□ -0.46
UCA1-201ENST00000397381 NUP160Q12769 1436 aa12.18□□□□□ -0.46
UCA1-201ENST00000397381 TESK2Q96S53 571 aa12.17□□□□□ -0.46
UCA1-201ENST00000397381 DISP3Q9P2K9 1392 aa12.17□□□□□ -0.46
UCA1-201ENST00000397381 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
UCA1-201ENST00000397381 CC2D1BQ5T0F9 858 aaKnown RBP12.17□□□□□ -0.46
UCA1-201ENST00000397381 A2MP01023 1474 aa12.16□□□□□ -0.46
UCA1-201ENST00000397381 UNC13BO14795 1591 aa12.16□□□□□ -0.46
UCA1-201ENST00000397381 TMF1P82094 1093 aa12.16□□□□□ -0.46
UCA1-201ENST00000397381 PANK3Q9H999 370 aa12.16□□□□□ -0.46
UCA1-201ENST00000397381 SYNJ2O15056 1496 aa12.16□□□□□ -0.46
UCA1-201ENST00000397381 CCDC141Q6ZP82 1450 aa12.16□□□□□ -0.46
UCA1-201ENST00000397381 NBPF1Q3BBV0 1214 aa12.15□□□□□ -0.46
UCA1-201ENST00000397381 C20orf194Q5TEA3 1177 aa12.15□□□□□ -0.46
UCA1-201ENST00000397381 MYO5CQ9NQX4 1742 aa12.15□□□□□ -0.46
UCA1-201ENST00000397381 EIF3AQ14152 1382 aaKnown RBP12.14□□□□□ -0.47
UCA1-201ENST00000397381 C8orf34Q49A92 452 aa12.14□□□□□ -0.47
UCA1-201ENST00000397381 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
UCA1-201ENST00000397381 FRAT1Q92837 279 aaPredicted RBP12.14□□□□□ -0.47
UCA1-201ENST00000397381 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
UCA1-201ENST00000397381 DUSP27Q5VZP5 1158 aa12.14□□□□□ -0.47
UCA1-201ENST00000397381 SKAP1Q86WV1 359 aa12.14□□□□□ -0.47
UCA1-201ENST00000397381 ATP10BO94823 1461 aa12.14□□□□□ -0.47
UCA1-201ENST00000397381 RNF17Q9BXT8 1623 aaKnown RBP12.13□□□□□ -0.47
UCA1-201ENST00000397381 ZNF521Q96K83 1311 aa12.13□□□□□ -0.47
UCA1-201ENST00000397381 ADAMTS8Q9UP79 889 aa12.13□□□□□ -0.47
UCA1-201ENST00000397381 MAST1Q9Y2H9 1570 aa12.13□□□□□ -0.47
UCA1-201ENST00000397381 PLA2R1Q13018 1463 aa12.13□□□□□ -0.47
UCA1-201ENST00000397381 WDR43Q15061 677 aaKnown RBP eCLIP12.12□□□□□ -0.47
UCA1-201ENST00000397381 VIRMAQ69YN4 1812 aaKnown RBP12.12□□□□□ -0.47
UCA1-201ENST00000397381 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
UCA1-201ENST00000397381 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
UCA1-201ENST00000397381 IQGAP3Q86VI3 1631 aa12.11□□□□□ -0.47
UCA1-201ENST00000397381 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
UCA1-201ENST00000397381 SAMD9LQ8IVG5 1584 aa12.11□□□□□ -0.47
UCA1-201ENST00000397381 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
UCA1-201ENST00000397381 PREX2Q70Z35 1606 aa12.11□□□□□ -0.47
UCA1-201ENST00000397381 ATP10AO60312 1499 aa12.11□□□□□ -0.47
UCA1-201ENST00000397381 PPP2R1AP30153 589 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms