RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 TONSLQ96HA7 1378 aa8.62□□□□□ -1.03
RAPGEF4-203ENST00000397087 IQGAP1P46940 1657 aa8.62□□□□□ -1.03
RAPGEF4-203ENST00000397087 FAM50AQ14320 339 aaKnown RBP8.62□□□□□ -1.03
RAPGEF4-203ENST00000397087 ERCC6L2Q5T890 1561 aa8.61□□□□□ -1.03
RAPGEF4-203ENST00000397087 STAC3Q96MF2 364 aa8.61□□□□□ -1.03
RAPGEF4-203ENST00000397087 KTN1Q86UP2 1357 aaKnown RBP8.61□□□□□ -1.03
RAPGEF4-203ENST00000397087 MROH1Q8NDA8 1641 aa8.61□□□□□ -1.03
RAPGEF4-203ENST00000397087 GPRASP1Q5JY77 1395 aa8.6□□□□□ -1.03
RAPGEF4-203ENST00000397087 MAP3K4Q9Y6R4 1608 aa8.6□□□□□ -1.03
RAPGEF4-203ENST00000397087 P3H3Q8IVL6 736 aa8.6□□□□□ -1.03
RAPGEF4-203ENST00000397087 ARHGAP5Q13017 1502 aa8.6□□□□□ -1.03
RAPGEF4-203ENST00000397087 PTPRTO14522 1441 aa8.59□□□□□ -1.03
RAPGEF4-203ENST00000397087 PLEKHD1A6NEE1 506 aa8.59□□□□□ -1.03
RAPGEF4-203ENST00000397087 CNTLNQ9NXG0 1405 aa8.58□□□□□ -1.04
RAPGEF4-203ENST00000397087 SYNMO15061 1565 aa8.58□□□□□ -1.04
RAPGEF4-203ENST00000397087 MPHOSPH9Q99550 1183 aa8.58□□□□□ -1.04
RAPGEF4-203ENST00000397087 ATP7AQ04656 1500 aa8.58□□□□□ -1.04
RAPGEF4-203ENST00000397087 ROCK2O75116 1388 aaKnown RBP8.58□□□□□ -1.04
RAPGEF4-203ENST00000397087 MADDQ8WXG6 1647 aa8.58□□□□□ -1.04
RAPGEF4-203ENST00000397087 PELP1Q8IZL8 1130 aaKnown RBP8.57□□□□□ -1.04
RAPGEF4-203ENST00000397087 GTF3C3Q9Y5Q9 886 aa8.57□□□□□ -1.04
RAPGEF4-203ENST00000397087 MYOM2P54296 1465 aa8.57□□□□□ -1.04
RAPGEF4-203ENST00000397087 NEO1Q92859 1461 aa8.57□□□□□ -1.04
RAPGEF4-203ENST00000397087 SETBP1Q9Y6X0 1596 aa8.56□□□□□ -1.04
RAPGEF4-203ENST00000397087 KIDINS220Q9ULH0 1771 aa8.56□□□□□ -1.04
RAPGEF4-203ENST00000397087 SCAPERQ9BY12 1400 aa8.56□□□□□ -1.04
RAPGEF4-203ENST00000397087 PIK3C2BO00750 1634 aa8.55□□□□□ -1.04
RAPGEF4-203ENST00000397087 CFDP1Q9UEE9 299 aaPredicted RBP8.55□□□□□ -1.04
RAPGEF4-203ENST00000397087 HECW2Q9P2P5 1572 aa8.55□□□□□ -1.04
RAPGEF4-203ENST00000397087 MLH3Q9UHC1 1453 aa8.55□□□□□ -1.04
RAPGEF4-203ENST00000397087 NRXN1Q9ULB1 1477 aa8.55□□□□□ -1.04
RAPGEF4-203ENST00000397087 KIF15Q9NS87 1388 aa8.55□□□□□ -1.04
RAPGEF4-203ENST00000397087 NEUROD1Q13562 356 aa8.55□□□□□ -1.04
RAPGEF4-203ENST00000397087 EFCAB6Q5THR3 1501 aa8.55□□□□□ -1.04
RAPGEF4-203ENST00000397087 SLC4A2P04920 1241 aa8.54□□□□□ -1.04
RAPGEF4-203ENST00000397087 RICTORQ6R327 1708 aa8.54□□□□□ -1.04
RAPGEF4-203ENST00000397087 FANCAO15360 1455 aa8.53□□□□□ -1.04
RAPGEF4-203ENST00000397087 USP32Q8NFA0 1604 aa8.53□□□□□ -1.04
RAPGEF4-203ENST00000397087 KDM5AP29375 1690 aaKnown RBP8.53□□□□□ -1.04
RAPGEF4-203ENST00000397087 KIF1BO60333 1816 aa8.53□□□□□ -1.04
RAPGEF4-203ENST00000397087 ZNF518AQ6AHZ1 1483 aa8.51□□□□□ -1.05
RAPGEF4-203ENST00000397087 PRAG1Q86YV5 1406 aa8.51□□□□□ -1.05
RAPGEF4-203ENST00000397087 PLA2R1Q13018 1463 aa8.5□□□□□ -1.05
RAPGEF4-203ENST00000397087 PPLO60437 1756 aa8.5□□□□□ -1.05
RAPGEF4-203ENST00000397087 CLTCL1P53675 1640 aa8.5□□□□□ -1.05
RAPGEF4-203ENST00000397087 MIER1Q8N108 512 aa8.5□□□□□ -1.05
RAPGEF4-203ENST00000397087 ADGRB3O60242 1522 aa8.5□□□□□ -1.05
RAPGEF4-203ENST00000397087 CCDC7Q96M83 1385 aa8.5□□□□□ -1.05
RAPGEF4-203ENST00000397087 UGGT1Q9NYU2 1555 aa8.49□□□□□ -1.05
RAPGEF4-203ENST00000397087 PPRC1Q5VV67 1664 aaKnown RBP8.49□□□□□ -1.05
RAPGEF4-203ENST00000397087 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
RAPGEF4-203ENST00000397087 CAMSAP1Q5T5Y3 1602 aa8.48□□□□□ -1.05
RAPGEF4-203ENST00000397087 ARHGAP31Q2M1Z3 1444 aa8.48□□□□□ -1.05
RAPGEF4-203ENST00000397087 COL17A1Q9UMD9 1497 aaPredicted RBP8.48□□□□□ -1.05
RAPGEF4-203ENST00000397087 ABCA6Q8N139 1617 aa8.48□□□□□ -1.05
RAPGEF4-203ENST00000397087 AGLP35573 1532 aa8.47□□□□□ -1.05
RAPGEF4-203ENST00000397087 A2MP01023 1474 aa8.47□□□□□ -1.05
RAPGEF4-203ENST00000397087 POGZQ7Z3K3 1410 aa8.47□□□□□ -1.05
RAPGEF4-203ENST00000397087 WASHC2AQ641Q2 1341 aa8.47□□□□□ -1.05
RAPGEF4-203ENST00000397087 WASHC2CQ9Y4E1 1318 aa8.47□□□□□ -1.05
RAPGEF4-203ENST00000397087 MYOM1P52179 1685 aa8.47□□□□□ -1.05
RAPGEF4-203ENST00000397087 ERICH6BQ5W0A0 696 aa8.46□□□□□ -1.05
RAPGEF4-203ENST00000397087 SIN3AQ96ST3 1273 aa8.46□□□□□ -1.06
RAPGEF4-203ENST00000397087 EIF4G2P78344 907 aaKnown RBP eCLIP8.46□□□□□ -1.06
RAPGEF4-203ENST00000397087 TSPY4P0CV99 314 aa8.45□□□□□ -1.06
RAPGEF4-203ENST00000397087 TSPY10P0CW01 314 aa8.45□□□□□ -1.06
RAPGEF4-203ENST00000397087 EFCAB2Q5VUJ9 269 aa8.45□□□□□ -1.06
RAPGEF4-203ENST00000397087 DIP2CQ9Y2E4 1556 aa8.45□□□□□ -1.06
RAPGEF4-203ENST00000397087 ZNF644Q9H582 1327 aaPredicted RBP8.44□□□□□ -1.06
RAPGEF4-203ENST00000397087 ASXL2Q76L83 1435 aa8.44□□□□□ -1.06
RAPGEF4-203ENST00000397087 CLTCQ00610 1675 aaKnown RBP8.44□□□□□ -1.06
RAPGEF4-203ENST00000397087 DHX29Q7Z478 1369 aaKnown RBP8.44□□□□□ -1.06
RAPGEF4-203ENST00000397087 SLC24A1O60721 1099 aa8.44□□□□□ -1.06
RAPGEF4-203ENST00000397087 SBNO2Q9Y2G9 1366 aa8.43□□□□□ -1.06
RAPGEF4-203ENST00000397087 CCDC144AA2RUR9 1427 aa8.43□□□□□ -1.06
RAPGEF4-203ENST00000397087 MROH2AA6NES4 1674 aa8.43□□□□□ -1.06
RAPGEF4-203ENST00000397087 ADGRL1O94910 1474 aa8.43□□□□□ -1.06
RAPGEF4-203ENST00000397087 NPC1L1Q9UHC9 1359 aa8.43□□□□□ -1.06
RAPGEF4-203ENST00000397087 NUP155O75694 1391 aa8.43□□□□□ -1.06
RAPGEF4-203ENST00000397087 RRP7BPQ9NSQ0 103 aa8.43□□□□□ -1.06
RAPGEF4-203ENST00000397087 TRAPPC8Q9Y2L5 1435 aa8.43□□□□□ -1.06
RAPGEF4-203ENST00000397087 CNGB1Q14028 1251 aaPredicted RBP8.43□□□□□ -1.06
RAPGEF4-203ENST00000397087 ZFYVE9O95405 1425 aa8.42□□□□□ -1.06
RAPGEF4-203ENST00000397087 L3MBTL2Q969R5 705 aa8.42□□□□□ -1.06
RAPGEF4-203ENST00000397087 DIP2BQ9P265 1576 aa8.41□□□□□ -1.06
RAPGEF4-203ENST00000397087 ABCC3O15438 1527 aa8.41□□□□□ -1.06
RAPGEF4-203ENST00000397087 USP47Q96K76 1375 aa8.4□□□□□ -1.06
RAPGEF4-203ENST00000397087 BCANQ96GW7 911 aa8.4□□□□□ -1.07
RAPGEF4-203ENST00000397087 HSPA5P11021 654 aaKnown RBP8.39□□□□□ -1.07
RAPGEF4-203ENST00000397087 ANP32CO43423 234 aa8.39□□□□□ -1.07
RAPGEF4-203ENST00000397087 KNDC1Q76NI1 1749 aa8.39□□□□□ -1.07
RAPGEF4-203ENST00000397087 ANKRD26Q9UPS8 1709 aa8.39□□□□□ -1.07
RAPGEF4-203ENST00000397087 KANK1Q14678 1352 aa8.39□□□□□ -1.07
RAPGEF4-203ENST00000397087 PREX1Q8TCU6 1659 aa8.39□□□□□ -1.07
RAPGEF4-203ENST00000397087 NOS1P29475 1434 aa8.39□□□□□ -1.07
RAPGEF4-203ENST00000397087 SCAF11Q99590 1463 aaKnown RBP8.38□□□□□ -1.07
RAPGEF4-203ENST00000397087 LRPPRCP42704 1394 aaKnown RBP8.37□□□□□ -1.07
RAPGEF4-203ENST00000397087 PUS7Q96PZ0 661 aaKnown RBP8.37□□□□□ -1.07
RAPGEF4-203ENST00000397087 SIGLEC1Q9BZZ2 1709 aa8.37□□□□□ -1.07
RAPGEF4-203ENST00000397087 PKD2Q13563 968 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms