RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
ATP2A3-205ENST00000397041 NCOA2Q15596 1464 aa19.99■□□□□ 0.79
ATP2A3-205ENST00000397041 IPO8O15397 1037 aaKnown RBP19.99■□□□□ 0.79
ATP2A3-205ENST00000397041 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
ATP2A3-205ENST00000397041 NUTM2DQ5VT03 806 aaPredicted RBP19.97■□□□□ 0.79
ATP2A3-205ENST00000397041 C11orf95C9JLR9 678 aaPredicted RBP19.96■□□□□ 0.79
ATP2A3-205ENST00000397041 KIF3BO15066 747 aa19.96■□□□□ 0.79
ATP2A3-205ENST00000397041 JPH4Q96JJ6 628 aa19.96■□□□□ 0.79
ATP2A3-205ENST00000397041 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
ATP2A3-205ENST00000397041 PNISRQ8TF01 805 aaKnown RBP19.95■□□□□ 0.78
ATP2A3-205ENST00000397041 BRPF3Q9ULD4 1205 aa19.95■□□□□ 0.78
ATP2A3-205ENST00000397041 TRAK1Q9UPV9 953 aa19.94■□□□□ 0.78
ATP2A3-205ENST00000397041 CFTRP13569 1480 aa19.94■□□□□ 0.78
ATP2A3-205ENST00000397041 ANO8Q9HCE9 1232 aaPredicted RBP19.94■□□□□ 0.78
ATP2A3-205ENST00000397041 EFCAB2Q5VUJ9 269 aa19.94■□□□□ 0.78
ATP2A3-205ENST00000397041 ADAMTS8Q9UP79 889 aa19.94■□□□□ 0.78
ATP2A3-205ENST00000397041 E9PSI1 815 aa19.93■□□□□ 0.78
ATP2A3-205ENST00000397041 CGNL1Q0VF96 1302 aa19.9■□□□□ 0.78
ATP2A3-205ENST00000397041 BACH2Q9BYV9 841 aa19.88■□□□□ 0.77
ATP2A3-205ENST00000397041 ELL2O00472 640 aaPredicted RBP19.88■□□□□ 0.77
ATP2A3-205ENST00000397041 SKAP1Q86WV1 359 aa19.88■□□□□ 0.77
ATP2A3-205ENST00000397041 PANK1Q8TE04 598 aa19.88■□□□□ 0.77
ATP2A3-205ENST00000397041 HFM1A2PYH4 1435 aa19.88■□□□□ 0.77
ATP2A3-205ENST00000397041 BRD4O60885 1362 aaPredicted RBP19.88■□□□□ 0.77
ATP2A3-205ENST00000397041 FRAT2O75474 233 aaPredicted RBP19.88■□□□□ 0.77
ATP2A3-205ENST00000397041 EIF3AQ14152 1382 aaKnown RBP19.87■□□□□ 0.77
ATP2A3-205ENST00000397041 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
ATP2A3-205ENST00000397041 TAOK2Q9UL54 1235 aa19.87■□□□□ 0.77
ATP2A3-205ENST00000397041 OS9Q13438 667 aaPredicted RBP19.86■□□□□ 0.77
ATP2A3-205ENST00000397041 NBPF1Q3BBV0 1214 aa19.86■□□□□ 0.77
ATP2A3-205ENST00000397041 RSPH4AQ5TD94 716 aa19.86■□□□□ 0.77
ATP2A3-205ENST00000397041 CUX1P39880 1505 aa19.85■□□□□ 0.77
ATP2A3-205ENST00000397041 KCNJ4P48050 445 aa19.85■□□□□ 0.77
ATP2A3-205ENST00000397041 RSPH6AQ9H0K4 717 aa19.85■□□□□ 0.77
ATP2A3-205ENST00000397041 GAPVD1Q14C86 1478 aa19.84■□□□□ 0.77
ATP2A3-205ENST00000397041 FOXD4L5Q5VV16 416 aaPredicted RBP19.84■□□□□ 0.77
ATP2A3-205ENST00000397041 FOXD4L4Q8WXT5 416 aaPredicted RBP19.84■□□□□ 0.77
ATP2A3-205ENST00000397041 HDGFL2Q7Z4V5 671 aaPredicted RBP19.83■□□□□ 0.77
ATP2A3-205ENST00000397041 SPAG9O60271 1321 aaKnown RBP19.83■□□□□ 0.77
ATP2A3-205ENST00000397041 NOL8Q76FK4 1167 aaKnown RBP19.83■□□□□ 0.77
ATP2A3-205ENST00000397041 FYCO1Q9BQS8 1478 aa19.83■□□□□ 0.76
ATP2A3-205ENST00000397041 CALD1Q05682 793 aaKnown RBP19.82■□□□□ 0.76
ATP2A3-205ENST00000397041 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
ATP2A3-205ENST00000397041 SMG6Q86US8 1419 aaKnown RBP19.82■□□□□ 0.76
ATP2A3-205ENST00000397041 ZKSCAN2Q63HK3 967 aa19.82■□□□□ 0.76
ATP2A3-205ENST00000397041 ANKRD45Q5TZF3 282 aa19.81■□□□□ 0.76
ATP2A3-205ENST00000397041 ANKRD50Q9ULJ7 1429 aa19.81■□□□□ 0.76
ATP2A3-205ENST00000397041 ZRSR1Q15695 479 aaKnown RBP19.8■□□□□ 0.76
ATP2A3-205ENST00000397041 NAIPQ13075 1403 aa19.8■□□□□ 0.76
ATP2A3-205ENST00000397041 MCCP23508 829 aa19.8■□□□□ 0.76
ATP2A3-205ENST00000397041 HSP90AA2PQ14568 343 aaPredicted RBP19.79■□□□□ 0.76
ATP2A3-205ENST00000397041 MLECQ14165 292 aa19.79■□□□□ 0.76
ATP2A3-205ENST00000397041 GOLGA6L4A6NEF3 574 aa19.78■□□□□ 0.76
ATP2A3-205ENST00000397041 DDX11L8A8MPP1 907 aa19.78■□□□□ 0.76
ATP2A3-205ENST00000397041 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
ATP2A3-205ENST00000397041 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
ATP2A3-205ENST00000397041 FGD1P98174 961 aa19.77■□□□□ 0.75
ATP2A3-205ENST00000397041 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.77■□□□□ 0.75
ATP2A3-205ENST00000397041 BCAR3O75815 825 aa19.76■□□□□ 0.75
ATP2A3-205ENST00000397041 PTMSP20962 102 aa19.75■□□□□ 0.75
ATP2A3-205ENST00000397041 SLC4A10Q6U841 1118 aa19.75■□□□□ 0.75
ATP2A3-205ENST00000397041 NAP1L2Q9ULW6 460 aaPredicted RBP19.75■□□□□ 0.75
ATP2A3-205ENST00000397041 DZIP1LQ8IYY4 767 aaKnown RBP19.74■□□□□ 0.75
ATP2A3-205ENST00000397041 VSIG10Q8N0Z9 540 aa19.74■□□□□ 0.75
ATP2A3-205ENST00000397041 FOXD4L6Q3SYB3 417 aaPredicted RBP19.73■□□□□ 0.75
ATP2A3-205ENST00000397041 LMOD2Q6P5Q4 547 aa19.73■□□□□ 0.75
ATP2A3-205ENST00000397041 FOXD4L3Q6VB84 417 aaPredicted RBP19.73■□□□□ 0.75
ATP2A3-205ENST00000397041 PPP2R1AP30153 589 aa19.73■□□□□ 0.75
ATP2A3-205ENST00000397041 RTF1Q92541 710 aaKnown RBP19.73■□□□□ 0.75
ATP2A3-205ENST00000397041 CFAP44Q96MT7 982 aa19.73■□□□□ 0.75
ATP2A3-205ENST00000397041 CHMP5Q9NZZ3 219 aa19.73■□□□□ 0.75
ATP2A3-205ENST00000397041 TERF2IPQ9NYB0 399 aa19.73■□□□□ 0.75
ATP2A3-205ENST00000397041 MIA2Q96PC5 1412 aa19.72■□□□□ 0.75
ATP2A3-205ENST00000397041 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
ATP2A3-205ENST00000397041 LNPKQ9C0E8 428 aa19.72■□□□□ 0.75
ATP2A3-205ENST00000397041 DRC7Q8IY82 874 aa19.72■□□□□ 0.75
ATP2A3-205ENST00000397041 TRIM6-TRIM34B2RNG4 842 aa19.71■□□□□ 0.75
ATP2A3-205ENST00000397041 HAP1P54257 671 aaPredicted RBP19.71■□□□□ 0.75
ATP2A3-205ENST00000397041 KIAA2012Q0VF49 1180 aa19.7■□□□□ 0.74
ATP2A3-205ENST00000397041 C22orf23Q9BZE7 217 aa19.7■□□□□ 0.74
ATP2A3-205ENST00000397041 AQRO60306 1485 aaKnown RBP eCLIP19.7■□□□□ 0.746e-7■■■■■ 28.7
ATP2A3-205ENST00000397041 C20orf194Q5TEA3 1177 aa19.68■□□□□ 0.74
ATP2A3-205ENST00000397041 A0A0G2JS52 829 aa19.68■□□□□ 0.74
ATP2A3-205ENST00000397041 KIAA1211Q6ZU35 1233 aa19.67■□□□□ 0.74
ATP2A3-205ENST00000397041 RUNDC1Q96C34 613 aa19.67■□□□□ 0.74
ATP2A3-205ENST00000397041 DDX19BQ9UMR2 479 aa19.67■□□□□ 0.74
ATP2A3-205ENST00000397041 WASHC2CQ9Y4E1 1318 aa19.66■□□□□ 0.74
ATP2A3-205ENST00000397041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.65■□□□□ 0.742e-6■■■■□ 26.4
ATP2A3-205ENST00000397041 ST18O60284 1047 aa19.65■□□□□ 0.74
ATP2A3-205ENST00000397041 TCP11L2Q8N4U5 519 aa19.65■□□□□ 0.74
ATP2A3-205ENST00000397041 KIAA1107Q9UPP5 1409 aa19.65■□□□□ 0.74
ATP2A3-205ENST00000397041 MAPKBP1O60336 1514 aa19.64■□□□□ 0.74
ATP2A3-205ENST00000397041 RIPK4P57078 832 aa19.64■□□□□ 0.73
ATP2A3-205ENST00000397041 PTPRGP23470 1445 aa19.64■□□□□ 0.73
ATP2A3-205ENST00000397041 PDZRN3Q9UPQ7 1066 aa19.64■□□□□ 0.73
ATP2A3-205ENST00000397041 NUTM2FA1L443 756 aa19.64■□□□□ 0.73
ATP2A3-205ENST00000397041 SYAP1Q96A49 352 aaPredicted RBP19.63■□□□□ 0.73
ATP2A3-205ENST00000397041 HMMRO75330 724 aa19.61■□□□□ 0.73
ATP2A3-205ENST00000397041 MTHFSP49914 203 aa19.61■□□□□ 0.73
ATP2A3-205ENST00000397041 SKOR2Q2VWA4 1001 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms