RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.41■■□□□ 1.5
SCNN1A-205ENST00000396966 EIF2AK4Q9P2K8 1649 aaKnown RBP24.4■■□□□ 1.5
SCNN1A-205ENST00000396966 KDM5CP41229 1560 aa24.39■■□□□ 1.49
SCNN1A-205ENST00000396966 DEPDC5O75140 1603 aa24.39■■□□□ 1.49
SCNN1A-205ENST00000396966 POGZQ7Z3K3 1410 aa24.39■■□□□ 1.49
SCNN1A-205ENST00000396966 DIP2BQ9P265 1576 aa24.35■■□□□ 1.49
SCNN1A-205ENST00000396966 HECW2Q9P2P5 1572 aa24.35■■□□□ 1.49
SCNN1A-205ENST00000396966 DHX29Q7Z478 1369 aaKnown RBP24.33■■□□□ 1.49
SCNN1A-205ENST00000396966 MLH3Q9UHC1 1453 aa24.32■■□□□ 1.48
SCNN1A-205ENST00000396966 RICTORQ6R327 1708 aa24.29■■□□□ 1.48
SCNN1A-205ENST00000396966 KANK1Q14678 1352 aa24.28■■□□□ 1.48
SCNN1A-205ENST00000396966 FAM69CQ0P6D2 419 aa24.28■■□□□ 1.48
SCNN1A-205ENST00000396966 TET3O43151 1660 aa24.27■■□□□ 1.48
SCNN1A-205ENST00000396966 CCDC144AA2RUR9 1427 aa24.27■■□□□ 1.48
SCNN1A-205ENST00000396966 E9PCH4 1651 aa24.27■■□□□ 1.48
SCNN1A-205ENST00000396966 TSPOAP1O95153 1857 aa24.27■■□□□ 1.48
SCNN1A-205ENST00000396966 A2MP01023 1474 aa24.27■■□□□ 1.48
SCNN1A-205ENST00000396966 PRDM15P57071 1507 aaPredicted RBP24.26■■□□□ 1.47
SCNN1A-205ENST00000396966 KIF3BO15066 747 aa24.26■■□□□ 1.47
SCNN1A-205ENST00000396966 VWDEQ8N2E2 1590 aa24.25■■□□□ 1.47
SCNN1A-205ENST00000396966 ATP10AO60312 1499 aa24.25■■□□□ 1.47
SCNN1A-205ENST00000396966 ABCA6Q8N139 1617 aa24.24■■□□□ 1.47
SCNN1A-205ENST00000396966 MROH1Q8NDA8 1641 aa24.22■■□□□ 1.47
SCNN1A-205ENST00000396966 NBPF8Q3BBV2 869 aa24.22■■□□□ 1.47
SCNN1A-205ENST00000396966 RNF17Q9BXT8 1623 aaKnown RBP24.22■■□□□ 1.47
SCNN1A-205ENST00000396966 PLA2R1Q13018 1463 aa24.22■■□□□ 1.47
SCNN1A-205ENST00000396966 SPHKAPQ2M3C7 1700 aa24.21■■□□□ 1.47
SCNN1A-205ENST00000396966 HIRIP3Q9BW71 556 aaPredicted RBP24.21■■□□□ 1.47
SCNN1A-205ENST00000396966 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
SCNN1A-205ENST00000396966 PPRC1Q5VV67 1664 aaKnown RBP24.21■■□□□ 1.47
SCNN1A-205ENST00000396966 RAPGEF3O95398 923 aa24.19■■□□□ 1.46
SCNN1A-205ENST00000396966 KIF13AQ9H1H9 1805 aa24.19■■□□□ 1.46
SCNN1A-205ENST00000396966 EIF4G2P78344 907 aaKnown RBP eCLIP24.19■■□□□ 1.46
SCNN1A-205ENST00000396966 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
SCNN1A-205ENST00000396966 UHRF1BP1Q6BDS2 1440 aa24.17■■□□□ 1.46
SCNN1A-205ENST00000396966 DIP2CQ9Y2E4 1556 aa24.16■■□□□ 1.46
SCNN1A-205ENST00000396966 CEP152O94986 1710 aa24.15■■□□□ 1.46
SCNN1A-205ENST00000396966 HSPA5P11021 654 aaKnown RBP24.15■■□□□ 1.46
SCNN1A-205ENST00000396966 TRPM2O94759 1503 aa24.14■■□□□ 1.46
SCNN1A-205ENST00000396966 ZNF326Q5BKZ1 582 aaKnown RBP24.12■■□□□ 1.45
SCNN1A-205ENST00000396966 DCAF11Q8TEB1 546 aa24.12■■□□□ 1.45
SCNN1A-205ENST00000396966 LMTK2Q8IWU2 1503 aa24.12■■□□□ 1.45
SCNN1A-205ENST00000396966 ZMYM4Q5VZL5 1548 aa24.11■■□□□ 1.45
SCNN1A-205ENST00000396966 EFCAB6Q5THR3 1501 aa24.11■■□□□ 1.45
SCNN1A-205ENST00000396966 PTPRTO14522 1441 aa24.11■■□□□ 1.45
SCNN1A-205ENST00000396966 DDX10Q13206 875 aaKnown RBP24.1■■□□□ 1.45
SCNN1A-205ENST00000396966 RALGAPBQ86X10 1494 aa24.09■■□□□ 1.45
SCNN1A-205ENST00000396966 PELP1Q8IZL8 1130 aaKnown RBP24.09■■□□□ 1.45
SCNN1A-205ENST00000396966 KDM2AQ9Y2K7 1162 aa24.09■■□□□ 1.45
SCNN1A-205ENST00000396966 POLR1AO95602 1720 aaPredicted RBP24.08■■□□□ 1.44
SCNN1A-205ENST00000396966 CLTCL1P53675 1640 aa24.07■■□□□ 1.44
SCNN1A-205ENST00000396966 RGL3Q3MIN7 710 aa24.06■■□□□ 1.44
SCNN1A-205ENST00000396966 GGT6Q6P531 493 aa24.04■■□□□ 1.44
SCNN1A-205ENST00000396966 TRPM1Q7Z4N2 1603 aa24.04■■□□□ 1.44
SCNN1A-205ENST00000396966 SPATA31E1Q6ZUB1 1445 aa24.03■■□□□ 1.44
SCNN1A-205ENST00000396966 YEATS2Q9ULM3 1422 aa24.03■■□□□ 1.44
SCNN1A-205ENST00000396966 KIF1BO60333 1816 aa24.03■■□□□ 1.44
SCNN1A-205ENST00000396966 PRAG1Q86YV5 1406 aa24.01■■□□□ 1.43
SCNN1A-205ENST00000396966 ZC3H13Q5T200 1668 aaKnown RBP24.01■■□□□ 1.43
SCNN1A-205ENST00000396966 CAMSAP1Q5T5Y3 1602 aa24■■□□□ 1.43
SCNN1A-205ENST00000396966 ABCC3O15438 1527 aa23.99■■□□□ 1.43
SCNN1A-205ENST00000396966 NEURL4Q96JN8 1562 aa23.99■■□□□ 1.43
SCNN1A-205ENST00000396966 CFAP65Q6ZU64 1925 aaKnown RBP23.99■■□□□ 1.43
SCNN1A-205ENST00000396966 USP47Q96K76 1375 aa23.99■■□□□ 1.43
SCNN1A-205ENST00000396966 WASHC2CQ9Y4E1 1318 aa23.98■■□□□ 1.43
SCNN1A-205ENST00000396966 CARD11Q9BXL7 1154 aa23.97■■□□□ 1.43
SCNN1A-205ENST00000396966 WASHC2AQ641Q2 1341 aa23.96■■□□□ 1.43
SCNN1A-205ENST00000396966 REREQ9P2R6 1566 aa23.95■■□□□ 1.42
SCNN1A-205ENST00000396966 ROCK2O75116 1388 aaKnown RBP23.95■■□□□ 1.42
SCNN1A-205ENST00000396966 LAMC1P11047 1609 aa23.94■■□□□ 1.42
SCNN1A-205ENST00000396966 STAC3Q96MF2 364 aa23.93■■□□□ 1.42
SCNN1A-205ENST00000396966 NPATQ14207 1427 aa23.93■■□□□ 1.42
SCNN1A-205ENST00000396966 CCDC7Q96M83 1385 aa23.92■■□□□ 1.42
SCNN1A-205ENST00000396966 UGGT1Q9NYU2 1555 aa23.91■■□□□ 1.42
SCNN1A-205ENST00000396966 MADDQ8WXG6 1647 aa23.9■■□□□ 1.42
SCNN1A-205ENST00000396966 CNTLNQ9NXG0 1405 aa23.89■■□□□ 1.41
SCNN1A-205ENST00000396966 AGLP35573 1532 aa23.87■■□□□ 1.41
SCNN1A-205ENST00000396966 MROH2AA6NES4 1674 aa23.87■■□□□ 1.41
SCNN1A-205ENST00000396966 C11orf95C9JLR9 678 aaPredicted RBP23.87■■□□□ 1.41
SCNN1A-205ENST00000396966 ANP32CO43423 234 aa23.87■■□□□ 1.41
SCNN1A-205ENST00000396966 SIGLEC1Q9BZZ2 1709 aa23.87■■□□□ 1.41
SCNN1A-205ENST00000396966 IFT172Q9UG01 1749 aa23.87■■□□□ 1.41
SCNN1A-205ENST00000396966 GPRASP1Q5JY77 1395 aa23.86■■□□□ 1.41
SCNN1A-205ENST00000396966 ARHGAP31Q2M1Z3 1444 aa23.86■■□□□ 1.41
SCNN1A-205ENST00000396966 ARHGEF40Q8TER5 1519 aa23.86■■□□□ 1.41
SCNN1A-205ENST00000396966 COL17A1Q9UMD9 1497 aaPredicted RBP23.85■■□□□ 1.41
SCNN1A-205ENST00000396966 KIF7Q2M1P5 1343 aa23.84■■□□□ 1.41
SCNN1A-205ENST00000396966 ARID4BQ4LE39 1312 aaPredicted RBP23.83■■□□□ 1.4
SCNN1A-205ENST00000396966 KIAA1210Q9ULL0 1709 aa23.83■■□□□ 1.4
SCNN1A-205ENST00000396966 ADGRB3O60242 1522 aa23.82■■□□□ 1.4
SCNN1A-205ENST00000396966 NOS1P29475 1434 aa23.82■■□□□ 1.4
SCNN1A-205ENST00000396966 NBPF1Q3BBV0 1214 aa23.82■■□□□ 1.4
SCNN1A-205ENST00000396966 PIK3C2BO00750 1634 aa23.8■■□□□ 1.4
SCNN1A-205ENST00000396966 MYOM2P54296 1465 aa23.8■■□□□ 1.4
SCNN1A-205ENST00000396966 ST20-MTHFSA0A0A6YYL1 179 aa23.79■■□□□ 1.4
SCNN1A-205ENST00000396966 PREX1Q8TCU6 1659 aa23.79■■□□□ 1.4
SCNN1A-205ENST00000396966 SYNMO15061 1565 aa23.79■■□□□ 1.4
SCNN1A-205ENST00000396966 PPP6R1Q9UPN7 881 aa23.78■■□□□ 1.4
SCNN1A-205ENST00000396966 PPLO60437 1756 aa23.78■■□□□ 1.4
SCNN1A-205ENST00000396966 CHGAP10645 457 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms