RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
RPA3-202ENST00000396682 KDM5DQ9BY66 1539 aa21.21■□□□□ 0.99
RPA3-202ENST00000396682 RSPH4AQ5TD94 716 aa21.21■□□□□ 0.99
RPA3-202ENST00000396682 FAM135AQ9P2D6 1515 aa21.19■□□□□ 0.98
RPA3-202ENST00000396682 LOC105371045A0A1W2PR82 267 aa21.19■□□□□ 0.98
RPA3-202ENST00000396682 FBXO31Q5XUX0 539 aaPredicted RBP21.19■□□□□ 0.98
RPA3-202ENST00000396682 PZPP20742 1482 aa21.19■□□□□ 0.98
RPA3-202ENST00000396682 TNRQ92752 1358 aa21.17■□□□□ 0.98
RPA3-202ENST00000396682 WASHC2CQ9Y4E1 1318 aa21.14■□□□□ 0.97
RPA3-202ENST00000396682 KANK4Q5T7N3 995 aaPredicted RBP21.14■□□□□ 0.97
RPA3-202ENST00000396682 NEURL4Q96JN8 1562 aa21.14■□□□□ 0.97
RPA3-202ENST00000396682 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.97
RPA3-202ENST00000396682 DISP3Q9P2K9 1392 aa21.13■□□□□ 0.97
RPA3-202ENST00000396682 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
RPA3-202ENST00000396682 TSPY4P0CV99 314 aa21.12■□□□□ 0.97
RPA3-202ENST00000396682 TSPY10P0CW01 314 aa21.12■□□□□ 0.97
RPA3-202ENST00000396682 MAP3K1Q13233 1512 aa21.12■□□□□ 0.97
RPA3-202ENST00000396682 RNF17Q9BXT8 1623 aaKnown RBP21.11■□□□□ 0.97
RPA3-202ENST00000396682 ILDR2Q71H61 639 aa21.09■□□□□ 0.97
RPA3-202ENST00000396682 MIA2Q96PC5 1412 aa21.09■□□□□ 0.97
RPA3-202ENST00000396682 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
RPA3-202ENST00000396682 SPATA31D1Q6ZQQ2 1576 aa21.08■□□□□ 0.97
RPA3-202ENST00000396682 ABCC3O15438 1527 aa21.08■□□□□ 0.96
RPA3-202ENST00000396682 NLRP1Q9C000 1473 aa21.07■□□□□ 0.96
RPA3-202ENST00000396682 MROH1Q8NDA8 1641 aa21.07■□□□□ 0.96
RPA3-202ENST00000396682 UBAP1LF5GYI3 381 aa21.06■□□□□ 0.96
RPA3-202ENST00000396682 EIF2AK4Q9P2K8 1649 aaKnown RBP21.06■□□□□ 0.96
RPA3-202ENST00000396682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.06■□□□□ 0.96
RPA3-202ENST00000396682 UGGT1Q9NYU2 1555 aa21.05■□□□□ 0.96
RPA3-202ENST00000396682 ZC3H13Q5T200 1668 aaKnown RBP21.05■□□□□ 0.96
RPA3-202ENST00000396682 SHANK2Q9UPX8 1470 aa21.01■□□□□ 0.95
RPA3-202ENST00000396682 DEPDC5O75140 1603 aa21.01■□□□□ 0.95
RPA3-202ENST00000396682 CPS1P31327 1500 aa21.01■□□□□ 0.95
RPA3-202ENST00000396682 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
RPA3-202ENST00000396682 THEMISQ8N1K5 641 aaPredicted RBP21.01■□□□□ 0.95
RPA3-202ENST00000396682 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
RPA3-202ENST00000396682 MED14O60244 1454 aa21.01■□□□□ 0.95
RPA3-202ENST00000396682 CEP152O94986 1710 aa21■□□□□ 0.95
RPA3-202ENST00000396682 ERVK-7P63135 1459 aa21■□□□□ 0.95
RPA3-202ENST00000396682 DUOX2Q9NRD8 1548 aa20.99■□□□□ 0.95
RPA3-202ENST00000396682 NPHP4O75161 1426 aaPredicted RBP20.98■□□□□ 0.95
RPA3-202ENST00000396682 CROCC2H7BZ55 1655 aa20.97■□□□□ 0.95
RPA3-202ENST00000396682 ABCC5O15440 1437 aa20.96■□□□□ 0.95
RPA3-202ENST00000396682 IQGAP1P46940 1657 aa20.96■□□□□ 0.95
RPA3-202ENST00000396682 PTPN23Q9H3S7 1636 aa20.95■□□□□ 0.94
RPA3-202ENST00000396682 PRDM15P57071 1507 aaPredicted RBP20.94■□□□□ 0.94
RPA3-202ENST00000396682 KIF15Q9NS87 1388 aa20.94■□□□□ 0.94
RPA3-202ENST00000396682 CFAP65Q6ZU64 1925 aaKnown RBP20.94■□□□□ 0.94
RPA3-202ENST00000396682 SOCS7O14512 581 aa20.93■□□□□ 0.94
RPA3-202ENST00000396682 UBR1Q8IWV7 1749 aa20.92■□□□□ 0.94
RPA3-202ENST00000396682 ERBINQ96RT1 1412 aa20.92■□□□□ 0.94
RPA3-202ENST00000396682 STRCP1A6NGW2 1772 aa20.91■□□□□ 0.94
RPA3-202ENST00000396682 ALKQ9UM73 1620 aa20.91■□□□□ 0.94
RPA3-202ENST00000396682 DAPK1P53355 1430 aa20.9■□□□□ 0.94
RPA3-202ENST00000396682 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
RPA3-202ENST00000396682 ARHGAP31Q2M1Z3 1444 aa20.89■□□□□ 0.94
RPA3-202ENST00000396682 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
RPA3-202ENST00000396682 TOM1O60784 492 aa20.88■□□□□ 0.93
RPA3-202ENST00000396682 HSPA1LP34931 641 aa20.88■□□□□ 0.93
RPA3-202ENST00000396682 PIP4K2BP78356 416 aa20.88■□□□□ 0.93
RPA3-202ENST00000396682 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
RPA3-202ENST00000396682 ARHGAP23Q9P227 1491 aa20.86■□□□□ 0.93
RPA3-202ENST00000396682 SCAF11Q99590 1463 aaKnown RBP20.85■□□□□ 0.93
RPA3-202ENST00000396682 SLIT1O75093 1534 aa20.84■□□□□ 0.93
RPA3-202ENST00000396682 LRRC7Q96NW7 1537 aa20.84■□□□□ 0.93
RPA3-202ENST00000396682 APLP2Q06481 763 aa20.84■□□□□ 0.93
RPA3-202ENST00000396682 LTKP29376 864 aa20.83■□□□□ 0.93
RPA3-202ENST00000396682 SYNMO15061 1565 aa20.82■□□□□ 0.92
RPA3-202ENST00000396682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.922e-6■■■■□ 26.7
RPA3-202ENST00000396682 PIK3C2BO00750 1634 aa20.82■□□□□ 0.92
RPA3-202ENST00000396682 LMTK2Q8IWU2 1503 aa20.8■□□□□ 0.92
RPA3-202ENST00000396682 MED1Q15648 1581 aaPredicted RBP20.8■□□□□ 0.92
RPA3-202ENST00000396682 CHIC2Q9UKJ5 165 aa20.79■□□□□ 0.92
RPA3-202ENST00000396682 ANKRD30AQ9BXX3 1397 aa20.79■□□□□ 0.92
RPA3-202ENST00000396682 TXNDC2Q86VQ3 553 aa20.78■□□□□ 0.92
RPA3-202ENST00000396682 KANK1Q14678 1352 aa20.77■□□□□ 0.92
RPA3-202ENST00000396682 TMEM2Q9UHN6 1383 aa20.75■□□□□ 0.91
RPA3-202ENST00000396682 ADGRL2O95490 1459 aa20.75■□□□□ 0.91
RPA3-202ENST00000396682 KDM5AP29375 1690 aaKnown RBP20.74■□□□□ 0.91
RPA3-202ENST00000396682 XIRP1Q702N8 1843 aaKnown RBP20.74■□□□□ 0.91
RPA3-202ENST00000396682 EFCAB6Q5THR3 1501 aa20.73■□□□□ 0.91
RPA3-202ENST00000396682 IDI1Q13907 227 aa20.73■□□□□ 0.91
RPA3-202ENST00000396682 NOS1P29475 1434 aa20.72■□□□□ 0.91
RPA3-202ENST00000396682 EID1Q9Y6B2 187 aa20.72■□□□□ 0.91
RPA3-202ENST00000396682 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
RPA3-202ENST00000396682 ADGRB3O60242 1522 aa20.68■□□□□ 0.9
RPA3-202ENST00000396682 TET3O43151 1660 aa20.67■□□□□ 0.9
RPA3-202ENST00000396682 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
RPA3-202ENST00000396682 FAM50AQ14320 339 aaKnown RBP20.66■□□□□ 0.9
RPA3-202ENST00000396682 ANKRD50Q9ULJ7 1429 aa20.66■□□□□ 0.9
RPA3-202ENST00000396682 RPRD2Q5VT52 1461 aaKnown RBP20.62■□□□□ 0.89
RPA3-202ENST00000396682 SLC26A8Q96RN1 970 aa20.62■□□□□ 0.89
RPA3-202ENST00000396682 TMEM94Q12767 1356 aa20.61■□□□□ 0.89
RPA3-202ENST00000396682 SLC52A1Q9NWF4 448 aa20.61■□□□□ 0.89
RPA3-202ENST00000396682 KCNA6P17658 529 aa20.6■□□□□ 0.89
RPA3-202ENST00000396682 MYO5BQ9ULV0 1848 aa20.59■□□□□ 0.89
RPA3-202ENST00000396682 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
RPA3-202ENST00000396682 UNC13BO14795 1591 aa20.59■□□□□ 0.89
RPA3-202ENST00000396682 NWD1Q149M9 1564 aa20.59■□□□□ 0.89
RPA3-202ENST00000396682 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms