RNA–Protein interactions for RNA: ENST00000396645.6

HMGN2P46-203, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 1 (best)

Gene HMGN2P46, Length 1,284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-203ENST00000396645 MBD5Q9P267 1494 aa12.4□□□□□ -0.43
HMGN2P46-203ENST00000396645 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
HMGN2P46-203ENST00000396645 LHX8Q68G74 356 aa12.39□□□□□ -0.43
HMGN2P46-203ENST00000396645 CHIC2Q9UKJ5 165 aa12.39□□□□□ -0.43
HMGN2P46-203ENST00000396645 KIF13AQ9H1H9 1805 aa12.39□□□□□ -0.43
HMGN2P46-203ENST00000396645 TSPOAP1O95153 1857 aa12.38□□□□□ -0.43
HMGN2P46-203ENST00000396645 PTPRKQ15262 1439 aa12.37□□□□□ -0.43
HMGN2P46-203ENST00000396645 ZEB1P37275 1124 aaPredicted RBP12.37□□□□□ -0.43
HMGN2P46-203ENST00000396645 CCER1Q8TC90 406 aaPredicted RBP12.37□□□□□ -0.43
HMGN2P46-203ENST00000396645 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
HMGN2P46-203ENST00000396645 ZNF518AQ6AHZ1 1483 aa12.37□□□□□ -0.43
HMGN2P46-203ENST00000396645 RTEL1-TNFRSF6BF6WH68 1400 aa12.37□□□□□ -0.43
HMGN2P46-203ENST00000396645 NAIPQ13075 1403 aa12.37□□□□□ -0.43
HMGN2P46-203ENST00000396645 SCAPERQ9BY12 1400 aa12.37□□□□□ -0.43
HMGN2P46-203ENST00000396645 NCOA1Q15788 1441 aa12.36□□□□□ -0.43
HMGN2P46-203ENST00000396645 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
HMGN2P46-203ENST00000396645 RRP7BPQ9NSQ0 103 aa12.35□□□□□ -0.43
HMGN2P46-203ENST00000396645 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
HMGN2P46-203ENST00000396645 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
HMGN2P46-203ENST00000396645 CLSPNQ9HAW4 1339 aa12.34□□□□□ -0.43
HMGN2P46-203ENST00000396645 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
HMGN2P46-203ENST00000396645 ARHGEF12Q9NZN5 1544 aa12.32□□□□□ -0.44
HMGN2P46-203ENST00000396645 DUOX2Q9NRD8 1548 aa12.32□□□□□ -0.44
HMGN2P46-203ENST00000396645 KIF15Q9NS87 1388 aa12.31□□□□□ -0.44
HMGN2P46-203ENST00000396645 POGZQ7Z3K3 1410 aa12.31□□□□□ -0.44
HMGN2P46-203ENST00000396645 TRAPPC8Q9Y2L5 1435 aa12.31□□□□□ -0.44
HMGN2P46-203ENST00000396645 ATP7AQ04656 1500 aa12.31□□□□□ -0.44
HMGN2P46-203ENST00000396645 ANKRD50Q9ULJ7 1429 aa12.3□□□□□ -0.44
HMGN2P46-203ENST00000396645 PPRC1Q5VV67 1664 aaKnown RBP12.3□□□□□ -0.44
HMGN2P46-203ENST00000396645 KDM5CP41229 1560 aa12.3□□□□□ -0.44
HMGN2P46-203ENST00000396645 HECW2Q9P2P5 1572 aa12.3□□□□□ -0.44
HMGN2P46-203ENST00000396645 INO80Q9ULG1 1556 aaPredicted RBP12.3□□□□□ -0.44
HMGN2P46-203ENST00000396645 ZFYVE16Q7Z3T8 1539 aa12.29□□□□□ -0.44
HMGN2P46-203ENST00000396645 SPDYE4A6NLX3 237 aa12.29□□□□□ -0.44
HMGN2P46-203ENST00000396645 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
HMGN2P46-203ENST00000396645 TRIM52Q96A61 297 aa12.29□□□□□ -0.44
HMGN2P46-203ENST00000396645 ERBINQ96RT1 1412 aa12.28□□□□□ -0.44
HMGN2P46-203ENST00000396645 RICTORQ6R327 1708 aa12.28□□□□□ -0.44
HMGN2P46-203ENST00000396645 MLH3Q9UHC1 1453 aa12.28□□□□□ -0.44
HMGN2P46-203ENST00000396645 C19orf67A6NJJ6 358 aa12.27□□□□□ -0.45
HMGN2P46-203ENST00000396645 GABBR2O75899 941 aa12.27□□□□□ -0.45
HMGN2P46-203ENST00000396645 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.45
HMGN2P46-203ENST00000396645 DHX57Q6P158 1386 aaKnown RBP12.26□□□□□ -0.45
HMGN2P46-203ENST00000396645 EIF2AK4Q9P2K8 1649 aaKnown RBP12.26□□□□□ -0.45
HMGN2P46-203ENST00000396645 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
HMGN2P46-203ENST00000396645 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
HMGN2P46-203ENST00000396645 ZMYM4Q5VZL5 1548 aa12.24□□□□□ -0.45
HMGN2P46-203ENST00000396645 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
HMGN2P46-203ENST00000396645 DHX29Q7Z478 1369 aaKnown RBP12.22□□□□□ -0.45
HMGN2P46-203ENST00000396645 KDM6BO15054 1643 aa12.22□□□□□ -0.45
HMGN2P46-203ENST00000396645 UNC13BO14795 1591 aa12.22□□□□□ -0.45
HMGN2P46-203ENST00000396645 KANK1Q14678 1352 aa12.21□□□□□ -0.45
HMGN2P46-203ENST00000396645 RAPGEF3O95398 923 aa12.21□□□□□ -0.45
HMGN2P46-203ENST00000396645 KDM5DQ9BY66 1539 aa12.21□□□□□ -0.46
HMGN2P46-203ENST00000396645 A2MP01023 1474 aa12.21□□□□□ -0.46
HMGN2P46-203ENST00000396645 NUP155O75694 1391 aa12.2□□□□□ -0.46
HMGN2P46-203ENST00000396645 MPHOSPH9Q99550 1183 aa12.19□□□□□ -0.46
HMGN2P46-203ENST00000396645 BCORL1Q5H9F3 1711 aa12.19□□□□□ -0.46
HMGN2P46-203ENST00000396645 FRMPD1Q5SYB0 1578 aa12.18□□□□□ -0.46
HMGN2P46-203ENST00000396645 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
HMGN2P46-203ENST00000396645 ABCA6Q8N139 1617 aa12.18□□□□□ -0.46
HMGN2P46-203ENST00000396645 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
HMGN2P46-203ENST00000396645 DEPDC5O75140 1603 aa12.17□□□□□ -0.46
HMGN2P46-203ENST00000396645 IQGAP3Q86VI3 1631 aa12.17□□□□□ -0.46
HMGN2P46-203ENST00000396645 ATP10AO60312 1499 aa12.16□□□□□ -0.46
HMGN2P46-203ENST00000396645 TIMELESSQ9UNS1 1208 aa12.16□□□□□ -0.46
HMGN2P46-203ENST00000396645 REREQ9P2R6 1566 aa12.16□□□□□ -0.46
HMGN2P46-203ENST00000396645 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
HMGN2P46-203ENST00000396645 KIF3BO15066 747 aa12.15□□□□□ -0.46
HMGN2P46-203ENST00000396645 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
HMGN2P46-203ENST00000396645 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
HMGN2P46-203ENST00000396645 FAM135AQ9P2D6 1515 aa12.15□□□□□ -0.46
HMGN2P46-203ENST00000396645 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.47
HMGN2P46-203ENST00000396645 ARHGEF40Q8TER5 1519 aa12.14□□□□□ -0.47
HMGN2P46-203ENST00000396645 PZPP20742 1482 aa12.14□□□□□ -0.47
HMGN2P46-203ENST00000396645 PRDM15P57071 1507 aaPredicted RBP12.13□□□□□ -0.47
HMGN2P46-203ENST00000396645 PKD2Q13563 968 aa12.12□□□□□ -0.47
HMGN2P46-203ENST00000396645 TET3O43151 1660 aa12.12□□□□□ -0.47
HMGN2P46-203ENST00000396645 ZC3H13Q5T200 1668 aaKnown RBP12.12□□□□□ -0.47
HMGN2P46-203ENST00000396645 AGLP35573 1532 aa12.11□□□□□ -0.47
HMGN2P46-203ENST00000396645 YEATS2Q9ULM3 1422 aa12.11□□□□□ -0.47
HMGN2P46-203ENST00000396645 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
HMGN2P46-203ENST00000396645 VWDEQ8N2E2 1590 aa12.09□□□□□ -0.47
HMGN2P46-203ENST00000396645 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.47
HMGN2P46-203ENST00000396645 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
HMGN2P46-203ENST00000396645 LMTK2Q8IWU2 1503 aa12.08□□□□□ -0.48
HMGN2P46-203ENST00000396645 GGT6Q6P531 493 aa12.08□□□□□ -0.48
HMGN2P46-203ENST00000396645 ANKRD30BQ9BXX2 1392 aa12.07□□□□□ -0.48
HMGN2P46-203ENST00000396645 NEUROD1Q13562 356 aa12.07□□□□□ -0.48
HMGN2P46-203ENST00000396645 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
HMGN2P46-203ENST00000396645 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
HMGN2P46-203ENST00000396645 CEP152O94986 1710 aa12.06□□□□□ -0.48
HMGN2P46-203ENST00000396645 ESF1Q9H501 851 aaKnown RBP12.06□□□□□ -0.48
HMGN2P46-203ENST00000396645 MROH1Q8NDA8 1641 aa12.06□□□□□ -0.48
HMGN2P46-203ENST00000396645 RPRD2Q5VT52 1461 aaKnown RBP12.06□□□□□ -0.48
HMGN2P46-203ENST00000396645 SPDYE1Q8NFV5 336 aaPredicted RBP12.05□□□□□ -0.48
HMGN2P46-203ENST00000396645 E9PCH4 1651 aa12.05□□□□□ -0.48
HMGN2P46-203ENST00000396645 SPHKAPQ2M3C7 1700 aa12.05□□□□□ -0.48
HMGN2P46-203ENST00000396645 EFCAB6Q5THR3 1501 aa12.05□□□□□ -0.48
HMGN2P46-203ENST00000396645 CCDC144AA2RUR9 1427 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms