RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 NCKAP5LQ9HCH0 1330 aa26.96■■□□□ 1.91
TNFSF13-205ENST00000396545 MAP3K1Q13233 1512 aa26.96■■□□□ 1.91
TNFSF13-205ENST00000396545 KDM5DQ9BY66 1539 aa26.96■■□□□ 1.91
TNFSF13-205ENST00000396545 A2ML1A8K2U0 1454 aa26.93■■□□□ 1.9
TNFSF13-205ENST00000396545 IQSEC2Q5JU85 1478 aa26.93■■□□□ 1.9
TNFSF13-205ENST00000396545 PKD2Q13563 968 aa26.93■■□□□ 1.9
TNFSF13-205ENST00000396545 PZPP20742 1482 aa26.92■■□□□ 1.9
TNFSF13-205ENST00000396545 TSPY4P0CV99 314 aa26.91■■□□□ 1.9
TNFSF13-205ENST00000396545 TSPY10P0CW01 314 aa26.91■■□□□ 1.9
TNFSF13-205ENST00000396545 KANK4Q5T7N3 995 aaPredicted RBP26.91■■□□□ 1.9
TNFSF13-205ENST00000396545 DNMT1P26358 1616 aaKnown RBP26.9■■□□□ 1.9
TNFSF13-205ENST00000396545 MAST1Q9Y2H9 1570 aa26.89■■□□□ 1.9
TNFSF13-205ENST00000396545 TNRQ92752 1358 aa26.88■■□□□ 1.89
TNFSF13-205ENST00000396545 FBXO31Q5XUX0 539 aaPredicted RBP26.88■■□□□ 1.89
TNFSF13-205ENST00000396545 WASHC2CQ9Y4E1 1318 aa26.87■■□□□ 1.89
TNFSF13-205ENST00000396545 MYOM3Q5VTT5 1437 aa26.86■■□□□ 1.89
TNFSF13-205ENST00000396545 MIA2Q96PC5 1412 aa26.86■■□□□ 1.89
TNFSF13-205ENST00000396545 ZNF335Q9H4Z2 1342 aaPredicted RBP26.86■■□□□ 1.89
TNFSF13-205ENST00000396545 RNF17Q9BXT8 1623 aaKnown RBP26.84■■□□□ 1.89
TNFSF13-205ENST00000396545 EIF2AK4Q9P2K8 1649 aaKnown RBP26.8■■□□□ 1.88
TNFSF13-205ENST00000396545 ABCC3O15438 1527 aa26.78■■□□□ 1.88
TNFSF13-205ENST00000396545 NEURL4Q96JN8 1562 aa26.78■■□□□ 1.88
TNFSF13-205ENST00000396545 POLR1AO95602 1720 aaPredicted RBP26.78■■□□□ 1.88
TNFSF13-205ENST00000396545 NLRP1Q9C000 1473 aa26.77■■□□□ 1.88
TNFSF13-205ENST00000396545 ZC3H13Q5T200 1668 aaKnown RBP26.77■■□□□ 1.88
TNFSF13-205ENST00000396545 MROH1Q8NDA8 1641 aa26.75■■□□□ 1.87
TNFSF13-205ENST00000396545 DUOX2Q9NRD8 1548 aa26.72■■□□□ 1.87
TNFSF13-205ENST00000396545 UGGT1Q9NYU2 1555 aa26.72■■□□□ 1.87
TNFSF13-205ENST00000396545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.72■■□□□ 1.87
TNFSF13-205ENST00000396545 SPATA31D1Q6ZQQ2 1576 aa26.71■■□□□ 1.87
TNFSF13-205ENST00000396545 APLP2Q06481 763 aa26.71■■□□□ 1.87
TNFSF13-205ENST00000396545 SHANK2Q9UPX8 1470 aa26.7■■□□□ 1.87
TNFSF13-205ENST00000396545 THEMISQ8N1K5 641 aaPredicted RBP26.7■■□□□ 1.86
TNFSF13-205ENST00000396545 CROCC2H7BZ55 1655 aa26.68■■□□□ 1.86
TNFSF13-205ENST00000396545 PTPN23Q9H3S7 1636 aa26.68■■□□□ 1.86
TNFSF13-205ENST00000396545 ABCC5O15440 1437 aa26.68■■□□□ 1.86
TNFSF13-205ENST00000396545 ERVK-7P63135 1459 aa26.67■■□□□ 1.86
TNFSF13-205ENST00000396545 ANKLE2Q86XL3 938 aa26.67■■□□□ 1.86
TNFSF13-205ENST00000396545 UBAP1LF5GYI3 381 aa26.67■■□□□ 1.86
TNFSF13-205ENST00000396545 DEPDC5O75140 1603 aa26.66■■□□□ 1.86
TNFSF13-205ENST00000396545 KIF15Q9NS87 1388 aa26.66■■□□□ 1.86
TNFSF13-205ENST00000396545 DISP3Q9P2K9 1392 aa26.66■■□□□ 1.86
TNFSF13-205ENST00000396545 MED14O60244 1454 aa26.65■■□□□ 1.86
TNFSF13-205ENST00000396545 CEP152O94986 1710 aa26.65■■□□□ 1.86
TNFSF13-205ENST00000396545 CPS1P31327 1500 aa26.64■■□□□ 1.86
TNFSF13-205ENST00000396545 PRDM15P57071 1507 aaPredicted RBP26.64■■□□□ 1.86
TNFSF13-205ENST00000396545 ERBINQ96RT1 1412 aa26.63■■□□□ 1.85
TNFSF13-205ENST00000396545 FGD6Q6ZV73 1430 aa26.63■■□□□ 1.85
TNFSF13-205ENST00000396545 HRCP23327 699 aa26.63■■□□□ 1.85
TNFSF13-205ENST00000396545 NPHP4O75161 1426 aaPredicted RBP26.62■■□□□ 1.85
TNFSF13-205ENST00000396545 VWDEQ8N2E2 1590 aa26.61■■□□□ 1.85
TNFSF13-205ENST00000396545 DAPK1P53355 1430 aa26.61■■□□□ 1.85
TNFSF13-205ENST00000396545 PPARGC1BQ86YN6 1023 aaKnown RBP26.59■■□□□ 1.85
TNFSF13-205ENST00000396545 RRP7BPQ9NSQ0 103 aa26.58■■□□□ 1.85
TNFSF13-205ENST00000396545 IQGAP1P46940 1657 aa26.58■■□□□ 1.85
TNFSF13-205ENST00000396545 ARHGAP31Q2M1Z3 1444 aa26.58■■□□□ 1.84
TNFSF13-205ENST00000396545 UBR1Q8IWV7 1749 aa26.55■■□□□ 1.84
TNFSF13-205ENST00000396545 ILDR2Q71H61 639 aa26.54■■□□□ 1.84
TNFSF13-205ENST00000396545 CFAP65Q6ZU64 1925 aaKnown RBP26.54■■□□□ 1.84
TNFSF13-205ENST00000396545 ANKRD30AQ9BXX3 1397 aa26.5■■□□□ 1.83
TNFSF13-205ENST00000396545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.48■■□□□ 1.83
TNFSF13-205ENST00000396545 ARHGAP23Q9P227 1491 aa26.48■■□□□ 1.83
TNFSF13-205ENST00000396545 SLIT1O75093 1534 aa26.48■■□□□ 1.83
TNFSF13-205ENST00000396545 SCAF11Q99590 1463 aaKnown RBP26.47■■□□□ 1.83
TNFSF13-205ENST00000396545 KANK1Q14678 1352 aa26.47■■□□□ 1.83
TNFSF13-205ENST00000396545 LMTK2Q8IWU2 1503 aa26.46■■□□□ 1.83
TNFSF13-205ENST00000396545 TOM1O60784 492 aa26.46■■□□□ 1.83
TNFSF13-205ENST00000396545 CHIC2Q9UKJ5 165 aa26.46■■□□□ 1.83
TNFSF13-205ENST00000396545 STRCP1A6NGW2 1772 aa26.46■■□□□ 1.83
TNFSF13-205ENST00000396545 ADGRL2O95490 1459 aa26.44■■□□□ 1.82
TNFSF13-205ENST00000396545 PIP4K2BP78356 416 aa26.43■■□□□ 1.82
TNFSF13-205ENST00000396545 ALKQ9UM73 1620 aa26.43■■□□□ 1.82
TNFSF13-205ENST00000396545 PIK3C2BO00750 1634 aa26.42■■□□□ 1.82
TNFSF13-205ENST00000396545 SCAF1Q9H7N4 1312 aaKnown RBP26.42■■□□□ 1.82
TNFSF13-205ENST00000396545 SYNMO15061 1565 aa26.42■■□□□ 1.82
TNFSF13-205ENST00000396545 LRRC7Q96NW7 1537 aa26.42■■□□□ 1.82
TNFSF13-205ENST00000396545 LTKP29376 864 aa26.41■■□□□ 1.82
TNFSF13-205ENST00000396545 HSPA1LP34931 641 aa26.4■■□□□ 1.82
TNFSF13-205ENST00000396545 TXNDC2Q86VQ3 553 aa26.39■■□□□ 1.82
TNFSF13-205ENST00000396545 SOCS7O14512 581 aa26.38■■□□□ 1.81
TNFSF13-205ENST00000396545 EFCAB6Q5THR3 1501 aa26.38■■□□□ 1.81
TNFSF13-205ENST00000396545 KDM5AP29375 1690 aaKnown RBP26.37■■□□□ 1.81
TNFSF13-205ENST00000396545 TMEM2Q9UHN6 1383 aa26.37■■□□□ 1.81
TNFSF13-205ENST00000396545 NOS1P29475 1434 aa26.34■■□□□ 1.81
TNFSF13-205ENST00000396545 FAM50AQ14320 339 aaKnown RBP26.34■■□□□ 1.81
TNFSF13-205ENST00000396545 EID1Q9Y6B2 187 aa26.34■■□□□ 1.81
TNFSF13-205ENST00000396545 IDI1Q13907 227 aa26.33■■□□□ 1.8
TNFSF13-205ENST00000396545 ANKRD50Q9ULJ7 1429 aa26.32■■□□□ 1.8
TNFSF13-205ENST00000396545 STAG3Q9UJ98 1225 aa26.31■■□□□ 1.8
TNFSF13-205ENST00000396545 MED1Q15648 1581 aaPredicted RBP26.28■■□□□ 1.8
TNFSF13-205ENST00000396545 RPRD2Q5VT52 1461 aaKnown RBP26.28■■□□□ 1.8
TNFSF13-205ENST00000396545 ADGRB3O60242 1522 aa26.27■■□□□ 1.8
TNFSF13-205ENST00000396545 SLC52A1Q9NWF4 448 aa26.24■■□□□ 1.79
TNFSF13-205ENST00000396545 XIRP1Q702N8 1843 aaKnown RBP26.24■■□□□ 1.79
TNFSF13-205ENST00000396545 TET3O43151 1660 aa26.23■■□□□ 1.79
TNFSF13-205ENST00000396545 UNC13BO14795 1591 aa26.21■■□□□ 1.79
TNFSF13-205ENST00000396545 ROCK1Q13464 1354 aa26.18■■□□□ 1.78
TNFSF13-205ENST00000396545 GCC2Q8IWJ2 1684 aa26.17■■□□□ 1.78
TNFSF13-205ENST00000396545 KCNA6P17658 529 aa26.16■■□□□ 1.78
TNFSF13-205ENST00000396545 SLC26A8Q96RN1 970 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms