RNA–Protein interactions for RNA: ENST00000396184.7

PDE1C-203, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 8,852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-203ENST00000396184 UQCRHP07919 91 aa8.42□□□□□ -1.06
PDE1C-203ENST00000396184 SF3A1Q15459 793 aaKnown RBP8.42□□□□□ -1.06
PDE1C-203ENST00000396184 CHMP5Q9NZZ3 219 aa8.42□□□□□ -1.06
PDE1C-203ENST00000396184 ERICH4A6NGS2 130 aa8.42□□□□□ -1.06
PDE1C-203ENST00000396184 MEX3CQ5U5Q3 659 aaKnown RBP8.42□□□□□ -1.06
PDE1C-203ENST00000396184 KTN1Q86UP2 1357 aaKnown RBP8.42□□□□□ -1.06
PDE1C-203ENST00000396184 TPD52L1Q16890 204 aaPredicted RBP8.42□□□□□ -1.06
PDE1C-203ENST00000396184 PLPPR3Q6T4P5 718 aa8.41□□□□□ -1.06
PDE1C-203ENST00000396184 DCTN1Q14203 1278 aa8.41□□□□□ -1.06
PDE1C-203ENST00000396184 RASSF8Q8NHQ8 419 aa8.41□□□□□ -1.06
PDE1C-203ENST00000396184 TSPYL1Q9H0U9 437 aa8.41□□□□□ -1.06
PDE1C-203ENST00000396184 CDR1P51861 262 aa8.41□□□□□ -1.06
PDE1C-203ENST00000396184 HAP1P54257 671 aaPredicted RBP8.4□□□□□ -1.06
PDE1C-203ENST00000396184 SKIDA1Q1XH10 827 aa8.4□□□□□ -1.06
PDE1C-203ENST00000396184 DYDC1Q8WWB3 177 aa8.4□□□□□ -1.06
PDE1C-203ENST00000396184 HSPA5P11021 654 aaKnown RBP8.4□□□□□ -1.06
PDE1C-203ENST00000396184 USP8P40818 1118 aa8.4□□□□□ -1.06
PDE1C-203ENST00000396184 KCNH8Q96L42 1107 aa8.4□□□□□ -1.06
PDE1C-203ENST00000396184 ZHX1Q9UKY1 873 aaPredicted RBP8.4□□□□□ -1.06
PDE1C-203ENST00000396184 H3BQV1 296 aa8.39□□□□□ -1.07
PDE1C-203ENST00000396184 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
PDE1C-203ENST00000396184 GPATCH11Q8N954 259 aa8.39□□□□□ -1.07
PDE1C-203ENST00000396184 CGNQ9P2M7 1197 aaKnown RBP8.39□□□□□ -1.07
PDE1C-203ENST00000396184 MCTP1Q6DN14 999 aa8.39□□□□□ -1.07
PDE1C-203ENST00000396184 IPO7O95373 1038 aaKnown RBP8.39□□□□□ -1.07
PDE1C-203ENST00000396184 RBM25P49756 843 aaKnown RBP8.39□□□□□ -1.07
PDE1C-203ENST00000396184 CCDC173Q0VFZ6 552 aa8.39□□□□□ -1.07
PDE1C-203ENST00000396184 ISY1Q9ULR0 285 aaKnown RBP8.39□□□□□ -1.07
PDE1C-203ENST00000396184 GIMAP7Q8NHV1 300 aa8.39□□□□□ -1.07
PDE1C-203ENST00000396184 CLUAP1Q96AJ1 413 aa8.39□□□□□ -1.07
PDE1C-203ENST00000396184 CHMP3Q9Y3E7 222 aa8.39□□□□□ -1.07
PDE1C-203ENST00000396184 TMF1P82094 1093 aa8.38□□□□□ -1.07
PDE1C-203ENST00000396184 E9PSI1 815 aa8.38□□□□□ -1.07
PDE1C-203ENST00000396184 CHMP4AQ9BY43 222 aa8.38□□□□□ -1.07
PDE1C-203ENST00000396184 ZCCHC6Q5VYS8 1495 aaKnown RBP8.38□□□□□ -1.07
PDE1C-203ENST00000396184 NEFHP12036 1026 aa8.38□□□□□ -1.07
PDE1C-203ENST00000396184 EXOC6Q8TAG9 804 aa8.38□□□□□ -1.07
PDE1C-203ENST00000396184 SMC4Q9NTJ3 1288 aa8.37□□□□□ -1.07
PDE1C-203ENST00000396184 ERCC4Q92889 916 aaPredicted RBP8.37□□□□□ -1.07
PDE1C-203ENST00000396184 KIAA0754O94854 1291 aa8.37□□□□□ -1.07
PDE1C-203ENST00000396184 FBXO3Q9UK99 471 aa8.37□□□□□ -1.07
PDE1C-203ENST00000396184 TRAK2O60296 914 aa8.37□□□□□ -1.07
PDE1C-203ENST00000396184 PDCL3Q9H2J4 239 aa8.37□□□□□ -1.07
PDE1C-203ENST00000396184 FRAT2O75474 233 aaPredicted RBP8.37□□□□□ -1.07
PDE1C-203ENST00000396184 RNF214Q8ND24 703 aa8.37□□□□□ -1.07
PDE1C-203ENST00000396184 RALBP1Q15311 655 aa8.37□□□□□ -1.07
PDE1C-203ENST00000396184 NPHP1O15259 732 aa8.36□□□□□ -1.07
PDE1C-203ENST00000396184 GPATCH3Q96I76 525 aa8.36□□□□□ -1.07
PDE1C-203ENST00000396184 CENPJQ9HC77 1338 aaPredicted RBP8.36□□□□□ -1.07
PDE1C-203ENST00000396184 RRP1P56182 461 aaKnown RBP8.36□□□□□ -1.07
PDE1C-203ENST00000396184 PDE3BQ13370 1112 aa8.36□□□□□ -1.07
PDE1C-203ENST00000396184 GOLGA3Q08378 1498 aa8.36□□□□□ -1.07
PDE1C-203ENST00000396184 PLIN1O60240 522 aa8.36□□□□□ -1.07
PDE1C-203ENST00000396184 ZNF526Q8TF50 670 aaPredicted RBP8.36□□□□□ -1.07
PDE1C-203ENST00000396184 PAK3O75914 559 aaPredicted RBP8.36□□□□□ -1.07
PDE1C-203ENST00000396184 IRX3P78415 501 aaPredicted RBP8.36□□□□□ -1.07
PDE1C-203ENST00000396184 AXDND1Q5T1B0 1012 aaPredicted RBP8.36□□□□□ -1.07
PDE1C-203ENST00000396184 MORC1Q86VD1 984 aa8.36□□□□□ -1.07
PDE1C-203ENST00000396184 CBX1P83916 185 aa8.35□□□□□ -1.07
PDE1C-203ENST00000396184 GORABQ5T7V8 394 aa8.35□□□□□ -1.07
PDE1C-203ENST00000396184 ESPNB1AK53 854 aa8.35□□□□□ -1.07
PDE1C-203ENST00000396184 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.35□□□□□ -1.07
PDE1C-203ENST00000396184 SASS6Q6UVJ0 657 aa8.35□□□□□ -1.07
PDE1C-203ENST00000396184 DHX37Q8IY37 1157 aaKnown RBP8.35□□□□□ -1.07
PDE1C-203ENST00000396184 TNNT1P13805 278 aa8.35□□□□□ -1.07
PDE1C-203ENST00000396184 RSPH4AQ5TD94 716 aa8.35□□□□□ -1.07
PDE1C-203ENST00000396184 FAM184AQ8NB25 1140 aa8.34□□□□□ -1.07
PDE1C-203ENST00000396184 IPO4Q8TEX9 1081 aaKnown RBP8.34□□□□□ -1.07
PDE1C-203ENST00000396184 RSF1Q96T23 1441 aaPredicted RBP8.34□□□□□ -1.07
PDE1C-203ENST00000396184 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
PDE1C-203ENST00000396184 NUCB2P80303 420 aa8.34□□□□□ -1.07
PDE1C-203ENST00000396184 CRBNQ96SW2 442 aa8.34□□□□□ -1.07
PDE1C-203ENST00000396184 BAZ1BQ9UIG0 1483 aaKnown RBP8.34□□□□□ -1.07
PDE1C-203ENST00000396184 BICD2Q8TD16 824 aa8.34□□□□□ -1.07
PDE1C-203ENST00000396184 FBXW7Q969H0 707 aa8.34□□□□□ -1.07
PDE1C-203ENST00000396184 PDCL2Q8N4E4 241 aa8.34□□□□□ -1.08
PDE1C-203ENST00000396184 CAVIN1Q6NZI2 390 aaKnown RBP8.33□□□□□ -1.08
PDE1C-203ENST00000396184 PCMTD1Q96MG8 357 aaPredicted RBP8.33□□□□□ -1.08
PDE1C-203ENST00000396184 CALCOCO1Q9P1Z2 691 aa8.33□□□□□ -1.08
PDE1C-203ENST00000396184 PDIA4P13667 645 aaKnown RBP8.33□□□□□ -1.08
PDE1C-203ENST00000396184 INCENPQ9NQS7 918 aa8.33□□□□□ -1.08
PDE1C-203ENST00000396184 ZBED9Q6R2W3 1325 aa8.33□□□□□ -1.08
PDE1C-203ENST00000396184 PABPN1Q86U42 306 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDE1C-203ENST00000396184 CENPHQ9H3R5 247 aa8.33□□□□□ -1.08
PDE1C-203ENST00000396184 CT47B1P0C2W7 299 aaPredicted RBP8.32□□□□□ -1.08
PDE1C-203ENST00000396184 CAGE1Q8TC20 777 aa8.32□□□□□ -1.08
PDE1C-203ENST00000396184 TRERF1Q96PN7 1200 aa8.32□□□□□ -1.08
PDE1C-203ENST00000396184 ANKRD20A12PQ8NF67 263 aa8.32□□□□□ -1.08
PDE1C-203ENST00000396184 DCAF11Q8TEB1 546 aa8.32□□□□□ -1.08
PDE1C-203ENST00000396184 ANKRD45Q5TZF3 282 aa8.32□□□□□ -1.08
PDE1C-203ENST00000396184 GRPEL1Q9HAV7 217 aa8.32□□□□□ -1.08
PDE1C-203ENST00000396184 GOLGA6L7A0A1B0GV03 622 aa8.32□□□□□ -1.08
PDE1C-203ENST00000396184 CCDC112Q8NEF3 446 aa8.32□□□□□ -1.08
PDE1C-203ENST00000396184 TRIM5Q9C035 493 aa8.31□□□□□ -1.08
PDE1C-203ENST00000396184 CCNB3Q8WWL7 1395 aa8.31□□□□□ -1.08
PDE1C-203ENST00000396184 U2AF1L5P0DN76 240 aaPredicted RBP8.31□□□□□ -1.08
PDE1C-203ENST00000396184 NAP1L1P55209 391 aaKnown RBP8.31□□□□□ -1.08
PDE1C-203ENST00000396184 U2AF1Q01081 240 aaKnown RBP eCLIP8.31□□□□□ -1.08
PDE1C-203ENST00000396184 RTF1Q92541 710 aaKnown RBP8.31□□□□□ -1.08
PDE1C-203ENST00000396184 RILPL2Q969X0 211 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms