RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
CCR9-203ENST00000395963 COL17A1Q9UMD9 1497 aaPredicted RBP13.09□□□□□ -0.31
CCR9-203ENST00000395963 IQGAP3Q86VI3 1631 aa13.09□□□□□ -0.31
CCR9-203ENST00000395963 ZC3H13Q5T200 1668 aaKnown RBP13.08□□□□□ -0.31
CCR9-203ENST00000395963 RRP7BPQ9NSQ0 103 aa13.08□□□□□ -0.32
CCR9-203ENST00000395963 VWDEQ8N2E2 1590 aa13.08□□□□□ -0.32
CCR9-203ENST00000395963 RAPGEF3O95398 923 aa13.07□□□□□ -0.32
CCR9-203ENST00000395963 PPP6R1Q9UPN7 881 aa13.07□□□□□ -0.32
CCR9-203ENST00000395963 LMTK2Q8IWU2 1503 aa13.07□□□□□ -0.32
CCR9-203ENST00000395963 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
CCR9-203ENST00000395963 KANK1Q14678 1352 aa13.04□□□□□ -0.32
CCR9-203ENST00000395963 MROH1Q8NDA8 1641 aa13.04□□□□□ -0.32
CCR9-203ENST00000395963 DHX57Q6P158 1386 aaKnown RBP13.03□□□□□ -0.32
CCR9-203ENST00000395963 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
CCR9-203ENST00000395963 TET3O43151 1660 aa13.03□□□□□ -0.32
CCR9-203ENST00000395963 PZPP20742 1482 aa13.01□□□□□ -0.33
CCR9-203ENST00000395963 RPRD2Q5VT52 1461 aaKnown RBP13.01□□□□□ -0.33
CCR9-203ENST00000395963 NUP155O75694 1391 aa12.99□□□□□ -0.33
CCR9-203ENST00000395963 ARHGAP31Q2M1Z3 1444 aa12.98□□□□□ -0.33
CCR9-203ENST00000395963 CNTLNQ9NXG0 1405 aa12.98□□□□□ -0.33
CCR9-203ENST00000395963 EFCAB6Q5THR3 1501 aa12.97□□□□□ -0.33
CCR9-203ENST00000395963 MROH2AA6NES4 1674 aa12.97□□□□□ -0.33
CCR9-203ENST00000395963 ABCC3O15438 1527 aa12.96□□□□□ -0.33
CCR9-203ENST00000395963 KIF3BO15066 747 aa12.96□□□□□ -0.33
CCR9-203ENST00000395963 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.34
CCR9-203ENST00000395963 TRIM52Q96A61 297 aa12.96□□□□□ -0.34
CCR9-203ENST00000395963 MPHOSPH9Q99550 1183 aa12.96□□□□□ -0.34
CCR9-203ENST00000395963 CAMSAP1Q5T5Y3 1602 aa12.95□□□□□ -0.34
CCR9-203ENST00000395963 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
CCR9-203ENST00000395963 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
CCR9-203ENST00000395963 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
CCR9-203ENST00000395963 CCER1Q8TC90 406 aaPredicted RBP12.93□□□□□ -0.34
CCR9-203ENST00000395963 CEP152O94986 1710 aa12.92□□□□□ -0.34
CCR9-203ENST00000395963 E9PCH4 1651 aa12.92□□□□□ -0.34
CCR9-203ENST00000395963 SIGLEC1Q9BZZ2 1709 aa12.92□□□□□ -0.34
CCR9-203ENST00000395963 TRPM2O94759 1503 aa12.91□□□□□ -0.34
CCR9-203ENST00000395963 PTPRTO14522 1441 aa12.91□□□□□ -0.34
CCR9-203ENST00000395963 SPHKAPQ2M3C7 1700 aa12.9□□□□□ -0.34
CCR9-203ENST00000395963 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
CCR9-203ENST00000395963 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
CCR9-203ENST00000395963 PKD2Q13563 968 aa12.87□□□□□ -0.35
CCR9-203ENST00000395963 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
CCR9-203ENST00000395963 NOS1P29475 1434 aa12.86□□□□□ -0.35
CCR9-203ENST00000395963 FER1L4A9Z1Z3 1794 aa12.86□□□□□ -0.35
CCR9-203ENST00000395963 ADAMTSL3P82987 1691 aa12.86□□□□□ -0.35
CCR9-203ENST00000395963 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
CCR9-203ENST00000395963 NPATQ14207 1427 aa12.86□□□□□ -0.35
CCR9-203ENST00000395963 GGT6Q6P531 493 aa12.86□□□□□ -0.35
CCR9-203ENST00000395963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCR9-203ENST00000395963 PREX1Q8TCU6 1659 aa12.85□□□□□ -0.35
CCR9-203ENST00000395963 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
CCR9-203ENST00000395963 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
CCR9-203ENST00000395963 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
CCR9-203ENST00000395963 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.36
CCR9-203ENST00000395963 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
CCR9-203ENST00000395963 ERVK-7P63135 1459 aa12.82□□□□□ -0.36
CCR9-203ENST00000395963 PLA2R1Q13018 1463 aa12.82□□□□□ -0.36
CCR9-203ENST00000395963 ARID4BQ4LE39 1312 aaPredicted RBP12.82□□□□□ -0.36
CCR9-203ENST00000395963 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
CCR9-203ENST00000395963 SLC52A1Q9NWF4 448 aa12.8□□□□□ -0.36
CCR9-203ENST00000395963 CLTCL1P53675 1640 aa12.79□□□□□ -0.36
CCR9-203ENST00000395963 KIF1BO60333 1816 aa12.79□□□□□ -0.36
CCR9-203ENST00000395963 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
CCR9-203ENST00000395963 SYNMO15061 1565 aa12.79□□□□□ -0.36
CCR9-203ENST00000395963 MADDQ8WXG6 1647 aa12.79□□□□□ -0.36
CCR9-203ENST00000395963 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
CCR9-203ENST00000395963 C3P01024 1663 aa12.78□□□□□ -0.36
CCR9-203ENST00000395963 ADGRB3O60242 1522 aa12.77□□□□□ -0.36
CCR9-203ENST00000395963 TONSLQ96HA7 1378 aa12.77□□□□□ -0.36
CCR9-203ENST00000395963 SPATA31E1Q6ZUB1 1445 aa12.76□□□□□ -0.37
CCR9-203ENST00000395963 RIMS1Q86UR5 1692 aaKnown RBP12.75□□□□□ -0.37
CCR9-203ENST00000395963 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
CCR9-203ENST00000395963 MYOM2P54296 1465 aa12.73□□□□□ -0.37
CCR9-203ENST00000395963 TNRQ92752 1358 aa12.73□□□□□ -0.37
CCR9-203ENST00000395963 IFT172Q9UG01 1749 aa12.72□□□□□ -0.37
CCR9-203ENST00000395963 UHRF1BP1Q6BDS2 1440 aa12.72□□□□□ -0.37
CCR9-203ENST00000395963 ZNF142P52746 1687 aaPredicted RBP12.72□□□□□ -0.37
CCR9-203ENST00000395963 MLECQ14165 292 aa12.71□□□□□ -0.37
CCR9-203ENST00000395963 TMEM131LA2VDJ0 1609 aa12.71□□□□□ -0.37
CCR9-203ENST00000395963 FOXD1Q16676 465 aa12.71□□□□□ -0.37
CCR9-203ENST00000395963 ZFYVE9O95405 1425 aa12.7□□□□□ -0.38
CCR9-203ENST00000395963 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
CCR9-203ENST00000395963 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
CCR9-203ENST00000395963 KIAA1210Q9ULL0 1709 aa12.69□□□□□ -0.38
CCR9-203ENST00000395963 PTPRMP28827 1452 aa12.69□□□□□ -0.38
CCR9-203ENST00000395963 A2ML1A8K2U0 1454 aa12.68□□□□□ -0.38
CCR9-203ENST00000395963 PPLO60437 1756 aa12.68□□□□□ -0.38
CCR9-203ENST00000395963 NRXN1Q9ULB1 1477 aa12.68□□□□□ -0.38
CCR9-203ENST00000395963 UBR1Q8IWV7 1749 aa12.67□□□□□ -0.38
CCR9-203ENST00000395963 SETD1BQ9UPS6 1966 aaKnown RBP12.67□□□□□ -0.38
CCR9-203ENST00000395963 LAMC1P11047 1609 aa12.67□□□□□ -0.38
CCR9-203ENST00000395963 UGGT1Q9NYU2 1555 aa12.67□□□□□ -0.38
CCR9-203ENST00000395963 PPP1R15AO75807 674 aaPredicted RBP12.66□□□□□ -0.38
CCR9-203ENST00000395963 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
CCR9-203ENST00000395963 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
CCR9-203ENST00000395963 CEP170BQ9Y4F5 1589 aaPredicted RBP12.65□□□□□ -0.38
CCR9-203ENST00000395963 HDGFP51858 240 aaKnown RBP12.65□□□□□ -0.38
CCR9-203ENST00000395963 SLIT1O75093 1534 aa12.65□□□□□ -0.38
CCR9-203ENST00000395963 IDI1Q13907 227 aa12.64□□□□□ -0.39
CCR9-203ENST00000395963 L3MBTL2Q969R5 705 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms