RNA–Protein interactions for RNA: ENST00000395925.7

GLI3-201, Transcript of GLI family zinc finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GLI3, Length 8,208 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-201ENST00000395925 U2AF1L5P0DN76 240 aaPredicted RBP15.22■□□□□ 0.03
GLI3-201ENST00000395925 U2AF1Q01081 240 aaKnown RBP eCLIP15.22■□□□□ 0.03
GLI3-201ENST00000395925 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
GLI3-201ENST00000395925 HDGFL2Q7Z4V5 671 aaPredicted RBP15.22■□□□□ 0.03
GLI3-201ENST00000395925 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
GLI3-201ENST00000395925 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.03
GLI3-201ENST00000395925 ANKRD20A12PQ8NF67 263 aa15.21■□□□□ 0.03
GLI3-201ENST00000395925 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
GLI3-201ENST00000395925 STK31Q9BXU1 1019 aa15.21■□□□□ 0.02
GLI3-201ENST00000395925 GTF2E1P29083 439 aaPredicted RBP15.2■□□□□ 0.02
GLI3-201ENST00000395925 R3HCC1Q9Y3T6 440 aaKnown RBP15.2■□□□□ 0.02
GLI3-201ENST00000395925 AMOTL1Q8IY63 956 aa15.19■□□□□ 0.02
GLI3-201ENST00000395925 HDAC5Q9UQL6 1122 aa15.19■□□□□ 0.02
GLI3-201ENST00000395925 RAD21O60216 631 aa15.18■□□□□ 0.02
GLI3-201ENST00000395925 ZFYVE27Q5T4F4 411 aa15.18■□□□□ 0.02
GLI3-201ENST00000395925 HSP90AB2PQ58FF8 381 aa15.17■□□□□ 0.02
GLI3-201ENST00000395925 CCDC47Q96A33 483 aaKnown RBP15.17■□□□□ 0.02
GLI3-201ENST00000395925 RCAN3Q9UKA8 241 aa15.17■□□□□ 0.02
GLI3-201ENST00000395925 FOXD4L6Q3SYB3 417 aaPredicted RBP15.17■□□□□ 0.02
GLI3-201ENST00000395925 FOXD4L3Q6VB84 417 aaPredicted RBP15.17■□□□□ 0.02
GLI3-201ENST00000395925 BECN2A8MW95 431 aa15.17■□□□□ 0.02
GLI3-201ENST00000395925 SMC4Q9NTJ3 1288 aa15.17■□□□□ 0.02
GLI3-201ENST00000395925 NAP1L1P55209 391 aaKnown RBP15.16■□□□□ 0.02
GLI3-201ENST00000395925 NOL10Q9BSC4 688 aaKnown RBP15.16■□□□□ 0.02
GLI3-201ENST00000395925 HOOK1Q9UJC3 728 aaKnown RBP15.16■□□□□ 0.02
GLI3-201ENST00000395925 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
GLI3-201ENST00000395925 NEXNQ0ZGT2 675 aa15.16■□□□□ 0.02
GLI3-201ENST00000395925 KTN1Q86UP2 1357 aaKnown RBP15.15■□□□□ 0.02
GLI3-201ENST00000395925 CCDC173Q0VFZ6 552 aa15.15■□□□□ 0.02
GLI3-201ENST00000395925 PMFBP1Q8TBY8 1022 aa15.15■□□□□ 0.02
GLI3-201ENST00000395925 EPS15P42566 896 aa15.15■□□□□ 0.02
GLI3-201ENST00000395925 ZNF592Q92610 1267 aa15.15■□□□□ 0.02
GLI3-201ENST00000395925 FAM184AQ8NB25 1140 aa15.15■□□□□ 0.02
GLI3-201ENST00000395925 CHMP4CQ96CF2 233 aa15.15■□□□□ 0.02
GLI3-201ENST00000395925 WWC2Q6AWC2 1192 aa15.14■□□□□ 0.01
GLI3-201ENST00000395925 PLCD4Q9BRC7 762 aa15.14■□□□□ 0.01
GLI3-201ENST00000395925 ST18O60284 1047 aa15.14■□□□□ 0.01
GLI3-201ENST00000395925 GOLGA3Q08378 1498 aa15.13■□□□□ 0.01
GLI3-201ENST00000395925 TCERG1O14776 1098 aaKnown RBP15.13■□□□□ 0.01
GLI3-201ENST00000395925 VSIG10Q8N0Z9 540 aa15.13■□□□□ 0.01
GLI3-201ENST00000395925 ACBD3Q9H3P7 528 aa15.13■□□□□ 0.01
GLI3-201ENST00000395925 CCDC180Q9P1Z9 1646 aa15.13■□□□□ 0.01
GLI3-201ENST00000395925 CEP162Q5TB80 1403 aa15.13■□□□□ 0.01
GLI3-201ENST00000395925 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
GLI3-201ENST00000395925 H0YHG0 523 aa15.12■□□□□ 0.01
GLI3-201ENST00000395925 GGT6Q6P531 493 aa15.12■□□□□ 0.01
GLI3-201ENST00000395925 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
GLI3-201ENST00000395925 SEPT11Q9NVA2 429 aaKnown RBP15.11■□□□□ 0.01
GLI3-201ENST00000395925 CLUAP1Q96AJ1 413 aa15.1■□□□□ 0.01
GLI3-201ENST00000395925 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
GLI3-201ENST00000395925 MCTP1Q6DN14 999 aa15.1■□□□□ 0.01
GLI3-201ENST00000395925 CCDC97Q96F63 343 aaPredicted RBP15.09■□□□□ 0.01
GLI3-201ENST00000395925 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
GLI3-201ENST00000395925 TRIM29Q14134 588 aa15.09■□□□□ 0.01
GLI3-201ENST00000395925 LTV1Q96GA3 475 aaPredicted RBP15.09■□□□□ 0.01
GLI3-201ENST00000395925 CCNB3Q8WWL7 1395 aa15.09■□□□□ 0.01
GLI3-201ENST00000395925 HSP90B2PQ58FF3 399 aa15.08■□□□□ 0.01
GLI3-201ENST00000395925 MEX3CQ5U5Q3 659 aaKnown RBP15.08■□□□□ 0.01
GLI3-201ENST00000395925 ATP6V1DQ9Y5K8 247 aa15.08■□□□□ 0
GLI3-201ENST00000395925 NEFHP12036 1026 aa15.08■□□□□ 0
GLI3-201ENST00000395925 LRRFIP1Q32MZ4 808 aaKnown RBP15.08■□□□□ 0
GLI3-201ENST00000395925 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
GLI3-201ENST00000395925 ROCK2O75116 1388 aaKnown RBP15.07■□□□□ 0
GLI3-201ENST00000395925 CWC15Q9P013 229 aaKnown RBP15.06■□□□□ 0
GLI3-201ENST00000395925 SEPT7Q16181 437 aaKnown RBP15.06■□□□□ 0
GLI3-201ENST00000395925 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
GLI3-201ENST00000395925 ERCC6Q03468 1493 aa15.05■□□□□ 0
GLI3-201ENST00000395925 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.05■□□□□ -0
GLI3-201ENST00000395925 ANKRD18AQ8IVF6 992 aa15.05■□□□□ -0
GLI3-201ENST00000395925 MSH5O43196 834 aa15.04■□□□□ -0
GLI3-201ENST00000395925 AMPHP49418 695 aa15.04■□□□□ -0
GLI3-201ENST00000395925 DHX16O60231 1041 aaKnown RBP15.04■□□□□ -0
GLI3-201ENST00000395925 CPLX2Q6PUV4 134 aaKnown RBP15.04■□□□□ -0
GLI3-201ENST00000395925 FOXD1Q16676 465 aa15.03■□□□□ -0
GLI3-201ENST00000395925 ARGLU1Q9NWB6 273 aaPredicted RBP15.03■□□□□ -0
GLI3-201ENST00000395925 DYDC1Q8WWB3 177 aa15.03■□□□□ -0
GLI3-201ENST00000395925 DDX11L8A8MPP1 907 aa15.03■□□□□ -0
GLI3-201ENST00000395925 IPO9Q96P70 1041 aaKnown RBP15.02■□□□□ -0
GLI3-201ENST00000395925 TMEM132AQ24JP5 1023 aa15.02■□□□□ -0
GLI3-201ENST00000395925 NGDNQ8NEJ9 315 aaKnown RBP15.02■□□□□ -0
GLI3-201ENST00000395925 RSPH6AQ9H0K4 717 aa15.02■□□□□ -0
GLI3-201ENST00000395925 DDX49Q9Y6V7 483 aaKnown RBP15.02■□□□□ -0
GLI3-201ENST00000395925 VPS37DQ86XT2 251 aa15.01□□□□□ -0.01
GLI3-201ENST00000395925 OFD1O75665 1012 aa15.01□□□□□ -0.01
GLI3-201ENST00000395925 HSPA5P11021 654 aaKnown RBP15.01□□□□□ -0.01
GLI3-201ENST00000395925 ANKRD62A6NC57 917 aa15.01□□□□□ -0.01
GLI3-201ENST00000395925 HSP90AB3PQ58FF7 597 aa15.01□□□□□ -0.01
GLI3-201ENST00000395925 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
GLI3-201ENST00000395925 CAGE1Q8TC20 777 aa15.01□□□□□ -0.01
GLI3-201ENST00000395925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.01
GLI3-201ENST00000395925 INCENPQ9NQS7 918 aa14.99□□□□□ -0.01
GLI3-201ENST00000395925 CLASRPQ8N2M8 674 aaKnown RBP14.99□□□□□ -0.01
GLI3-201ENST00000395925 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
GLI3-201ENST00000395925 CCER2I3L3R5 266 aa14.99□□□□□ -0.01
GLI3-201ENST00000395925 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
GLI3-201ENST00000395925 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
GLI3-201ENST00000395925 EZRP15311 586 aaKnown RBP14.98□□□□□ -0.01
GLI3-201ENST00000395925 FBXW7Q969H0 707 aa14.98□□□□□ -0.01
GLI3-201ENST00000395925 ANKRD45Q5TZF3 282 aa14.98□□□□□ -0.01
GLI3-201ENST00000395925 CCAR1Q8IX12 1150 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms