RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 CYB5RLQ6IPT4 315 aa12.6□□□□□ -0.39
CDRT1-204ENST00000395906 FGD6Q6ZV73 1430 aa12.6□□□□□ -0.39
CDRT1-204ENST00000395906 SLC4A3P48751 1232 aa12.6□□□□□ -0.39
CDRT1-204ENST00000395906 POGKQ9P215 609 aa12.6□□□□□ -0.39
CDRT1-204ENST00000395906 NUDCQ9Y266 331 aa12.59□□□□□ -0.39
CDRT1-204ENST00000395906 ABCA8O94911 1581 aa12.59□□□□□ -0.39
CDRT1-204ENST00000395906 MYOM3Q5VTT5 1437 aa12.58□□□□□ -0.4
CDRT1-204ENST00000395906 RRP7BPQ9NSQ0 103 aa12.58□□□□□ -0.4
CDRT1-204ENST00000395906 EHBP1L1Q8N3D4 1523 aa12.58□□□□□ -0.4
CDRT1-204ENST00000395906 RAB3GAP2Q9H2M9 1393 aa12.58□□□□□ -0.4
CDRT1-204ENST00000395906 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
CDRT1-204ENST00000395906 CFDP1Q9UEE9 299 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-204ENST00000395906 ARID4BQ4LE39 1312 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-204ENST00000395906 FAM9BQ8IZU0 186 aa12.57□□□□□ -0.4
CDRT1-204ENST00000395906 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
CDRT1-204ENST00000395906 KIF14Q15058 1648 aa12.56□□□□□ -0.4
CDRT1-204ENST00000395906 SUPT6HQ7KZ85 1726 aaKnown RBP12.56□□□□□ -0.4
CDRT1-204ENST00000395906 XRCC6P12956 609 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDRT1-204ENST00000395906 TROQ12816 1431 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-204ENST00000395906 ESPNB1AK53 854 aa12.55□□□□□ -0.4
CDRT1-204ENST00000395906 CCDC184Q52MB2 194 aa12.55□□□□□ -0.4
CDRT1-204ENST00000395906 GOLGA6L3A6NEY3 463 aa12.54□□□□□ -0.4
CDRT1-204ENST00000395906 ZHX1Q9UKY1 873 aaPredicted RBP12.54□□□□□ -0.4
CDRT1-204ENST00000395906 ARHGEF11O15085 1522 aa12.54□□□□□ -0.4
CDRT1-204ENST00000395906 RIMBP3CA6NJZ7 1639 aa12.53□□□□□ -0.4
CDRT1-204ENST00000395906 RIMBP3BA6NNM3 1639 aa12.53□□□□□ -0.4
CDRT1-204ENST00000395906 RIMBP3Q9UFD9 1639 aa12.53□□□□□ -0.4
CDRT1-204ENST00000395906 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
CDRT1-204ENST00000395906 MRS2Q9HD23 443 aa12.52□□□□□ -0.41
CDRT1-204ENST00000395906 HNRNPMP52272 730 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDRT1-204ENST00000395906 DMTNQ08495 405 aa12.51□□□□□ -0.41
CDRT1-204ENST00000395906 ABCC2Q92887 1545 aa12.51□□□□□ -0.41
CDRT1-204ENST00000395906 TERF1P54274 439 aa12.5□□□□□ -0.41
CDRT1-204ENST00000395906 KIAA1211Q6ZU35 1233 aa12.5□□□□□ -0.41
CDRT1-204ENST00000395906 FTSJ3Q8IY81 847 aaKnown RBP12.5□□□□□ -0.41
CDRT1-204ENST00000395906 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
CDRT1-204ENST00000395906 TMEM51Q9NW97 253 aa12.5□□□□□ -0.41
CDRT1-204ENST00000395906 MTERF4Q7Z6M4 381 aaKnown RBP12.49□□□□□ -0.41
CDRT1-204ENST00000395906 PTPN23Q9H3S7 1636 aa12.49□□□□□ -0.41
CDRT1-204ENST00000395906 GPATCH8Q9UKJ3 1502 aaKnown RBP12.49□□□□□ -0.41
CDRT1-204ENST00000395906 PANK2Q9BZ23 570 aa12.48□□□□□ -0.41
CDRT1-204ENST00000395906 SETD5Q9C0A6 1442 aa12.48□□□□□ -0.41
CDRT1-204ENST00000395906 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
CDRT1-204ENST00000395906 CNTLNQ9NXG0 1405 aa12.47□□□□□ -0.41
CDRT1-204ENST00000395906 ADCY10Q96PN6 1610 aa12.47□□□□□ -0.41
CDRT1-204ENST00000395906 ERBB4Q15303 1308 aa12.47□□□□□ -0.41
CDRT1-204ENST00000395906 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDRT1-204ENST00000395906 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
CDRT1-204ENST00000395906 PRKRIP1Q9H875 184 aaPredicted RBP12.47□□□□□ -0.41
CDRT1-204ENST00000395906 RIPK4P57078 832 aa12.46□□□□□ -0.41
CDRT1-204ENST00000395906 MRE11P49959 708 aa12.46□□□□□ -0.42
CDRT1-204ENST00000395906 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.42
CDRT1-204ENST00000395906 ZNF830Q96NB3 372 aaPredicted RBP12.45□□□□□ -0.42
CDRT1-204ENST00000395906 ZCCHC11Q5TAX3 1644 aaKnown RBP12.45□□□□□ -0.42
CDRT1-204ENST00000395906 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
CDRT1-204ENST00000395906 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
CDRT1-204ENST00000395906 RRP1P56182 461 aaKnown RBP12.43□□□□□ -0.42
CDRT1-204ENST00000395906 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-204ENST00000395906 KDM5BQ9UGL1 1544 aa12.43□□□□□ -0.42
CDRT1-204ENST00000395906 ABCC10Q5T3U5 1492 aa12.43□□□□□ -0.42
CDRT1-204ENST00000395906 KIF20AO95235 890 aa12.43□□□□□ -0.42
CDRT1-204ENST00000395906 TRIM44Q96DX7 344 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-204ENST00000395906 FAM13BQ9NYF5 915 aa12.43□□□□□ -0.42
CDRT1-204ENST00000395906 ANP32BQ92688 251 aaKnown RBP12.42□□□□□ -0.42
CDRT1-204ENST00000395906 MIA2Q96PC5 1412 aa12.42□□□□□ -0.42
CDRT1-204ENST00000395906 TTC37Q6PGP7 1564 aa12.41□□□□□ -0.42
CDRT1-204ENST00000395906 ABCC5O15440 1437 aa12.41□□□□□ -0.42
CDRT1-204ENST00000395906 OFD1O75665 1012 aa12.41□□□□□ -0.42
CDRT1-204ENST00000395906 FOXD1Q16676 465 aa12.41□□□□□ -0.42
CDRT1-204ENST00000395906 PRDM10Q9NQV6 1147 aa12.41□□□□□ -0.42
CDRT1-204ENST00000395906 CAMSAP2Q08AD1 1489 aa12.41□□□□□ -0.42
CDRT1-204ENST00000395906 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
CDRT1-204ENST00000395906 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.41□□□□□ -0.42
CDRT1-204ENST00000395906 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
CDRT1-204ENST00000395906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.41□□□□□ -0.42
CDRT1-204ENST00000395906 TONSLQ96HA7 1378 aa12.41□□□□□ -0.42
CDRT1-204ENST00000395906 ASXL2Q76L83 1435 aa12.4□□□□□ -0.42
CDRT1-204ENST00000395906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDRT1-204ENST00000395906 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.42
CDRT1-204ENST00000395906 ZSCAN20P17040 1043 aaPredicted RBP12.4□□□□□ -0.42
CDRT1-204ENST00000395906 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
CDRT1-204ENST00000395906 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
CDRT1-204ENST00000395906 DAPK1P53355 1430 aa12.4□□□□□ -0.43
CDRT1-204ENST00000395906 NAIPQ13075 1403 aa12.4□□□□□ -0.43
CDRT1-204ENST00000395906 UHRF1BP1LA0JNW5 1464 aa12.4□□□□□ -0.43
CDRT1-204ENST00000395906 ISY1Q9ULR0 285 aaKnown RBP12.39□□□□□ -0.43
CDRT1-204ENST00000395906 TCOF1Q13428 1488 aaKnown RBP12.39□□□□□ -0.43
CDRT1-204ENST00000395906 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
CDRT1-204ENST00000395906 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
CDRT1-204ENST00000395906 LETM1O95202 739 aaPredicted RBP12.38□□□□□ -0.43
CDRT1-204ENST00000395906 TAF3Q5VWG9 929 aa12.38□□□□□ -0.43
CDRT1-204ENST00000395906 ARHGAP5Q13017 1502 aa12.38□□□□□ -0.43
CDRT1-204ENST00000395906 VGLL3A8MV65 326 aa12.37□□□□□ -0.43
CDRT1-204ENST00000395906 TSPY4P0CV99 314 aa12.37□□□□□ -0.43
CDRT1-204ENST00000395906 TSPY10P0CW01 314 aa12.37□□□□□ -0.43
CDRT1-204ENST00000395906 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
CDRT1-204ENST00000395906 GRPEL1Q9HAV7 217 aa12.37□□□□□ -0.43
CDRT1-204ENST00000395906 KDM6BO15054 1643 aa12.37□□□□□ -0.43
CDRT1-204ENST00000395906 WDR7Q9Y4E6 1490 aa12.36□□□□□ -0.43
CDRT1-204ENST00000395906 CHMP4AQ9BY43 222 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms