RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 CYB5RLQ6IPT4 315 aa11.34□□□□□ -0.59
AP3S1-202ENST00000395548 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
AP3S1-202ENST00000395548 PDS5BQ9NTI5 1447 aa11.33□□□□□ -0.6
AP3S1-202ENST00000395548 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
AP3S1-202ENST00000395548 ZDHHC16Q969W1 377 aa11.3□□□□□ -0.6
AP3S1-202ENST00000395548 BCL2L12Q9HB09 334 aa11.3□□□□□ -0.6
AP3S1-202ENST00000395548 LAMC3Q9Y6N6 1575 aa11.29□□□□□ -0.6
AP3S1-202ENST00000395548 PSEN2P49810 448 aa11.29□□□□□ -0.6
AP3S1-202ENST00000395548 TK2O00142 265 aa11.28□□□□□ -0.6
AP3S1-202ENST00000395548 PTPREP23469 700 aa11.28□□□□□ -0.6
AP3S1-202ENST00000395548 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
AP3S1-202ENST00000395548 KCNK17Q96T54 332 aa11.28□□□□□ -0.6
AP3S1-202ENST00000395548 MYT1LQ9UL68 1186 aa11.28□□□□□ -0.6
AP3S1-202ENST00000395548 SPDYE16A6NNV3 312 aaPredicted RBP11.27□□□□□ -0.61
AP3S1-202ENST00000395548 PHF14O94880 888 aa11.27□□□□□ -0.61
AP3S1-202ENST00000395548 ARIH1Q9Y4X5 557 aaPredicted RBP11.27□□□□□ -0.61
AP3S1-202ENST00000395548 DMRTA1Q5VZB9 504 aa11.26□□□□□ -0.61
AP3S1-202ENST00000395548 ADGRD1Q6QNK2 874 aa11.26□□□□□ -0.61
AP3S1-202ENST00000395548 FBXW7Q969H0 707 aa11.26□□□□□ -0.61
AP3S1-202ENST00000395548 PCDHGA10Q9Y5H3 936 aa11.26□□□□□ -0.61
AP3S1-202ENST00000395548 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
AP3S1-202ENST00000395548 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
AP3S1-202ENST00000395548 PDIA6Q15084 440 aa11.24□□□□□ -0.61
AP3S1-202ENST00000395548 EPAS1Q99814 870 aa11.24□□□□□ -0.61
AP3S1-202ENST00000395548 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
AP3S1-202ENST00000395548 KIF21AQ7Z4S6 1674 aa11.23□□□□□ -0.61
AP3S1-202ENST00000395548 MRC2Q9UBG0 1479 aa11.22□□□□□ -0.61
AP3S1-202ENST00000395548 HMGXB3Q12766 1538 aa11.21□□□□□ -0.61
AP3S1-202ENST00000395548 ATAD2BQ9ULI0 1458 aa11.21□□□□□ -0.61
AP3S1-202ENST00000395548 STAC3Q96MF2 364 aa11.21□□□□□ -0.61
AP3S1-202ENST00000395548 SLC4A5Q9BY07 1137 aa11.21□□□□□ -0.61
AP3S1-202ENST00000395548 ZCCHC6Q5VYS8 1495 aaKnown RBP11.19□□□□□ -0.62
AP3S1-202ENST00000395548 DDX12PQ92771 950 aa11.19□□□□□ -0.62
AP3S1-202ENST00000395548 WDR62O43379 1518 aa11.19□□□□□ -0.62
AP3S1-202ENST00000395548 VPS9D1Q9Y2B5 631 aa11.18□□□□□ -0.62
AP3S1-202ENST00000395548 HRO43593 1189 aa11.17□□□□□ -0.62
AP3S1-202ENST00000395548 PPP1R3GB7ZBB8 358 aa11.15□□□□□ -0.62
AP3S1-202ENST00000395548 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
AP3S1-202ENST00000395548 ZBED2Q9BTP6 218 aa11.15□□□□□ -0.62
AP3S1-202ENST00000395548 NBR1Q14596 966 aa11.14□□□□□ -0.63
AP3S1-202ENST00000395548 C6orf132Q5T0Z8 1188 aa11.13□□□□□ -0.63
AP3S1-202ENST00000395548 RBM33Q96EV2 1170 aaKnown RBP11.13□□□□□ -0.63
AP3S1-202ENST00000395548 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
AP3S1-202ENST00000395548 GRXCR2A6NFK2 248 aa11.11□□□□□ -0.63
AP3S1-202ENST00000395548 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
AP3S1-202ENST00000395548 ARAP1Q96P48 1450 aa11.11□□□□□ -0.63
AP3S1-202ENST00000395548 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
AP3S1-202ENST00000395548 MAP3K7O43318 606 aa11.09□□□□□ -0.63
AP3S1-202ENST00000395548 COL9A1P20849 921 aa11.09□□□□□ -0.63
AP3S1-202ENST00000395548 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
AP3S1-202ENST00000395548 NBPF3Q9H094 633 aa11.08□□□□□ -0.64
AP3S1-202ENST00000395548 BAZ1BQ9UIG0 1483 aaKnown RBP11.07□□□□□ -0.64
AP3S1-202ENST00000395548 BHMG1C9JSJ3 638 aaPredicted RBP11.07□□□□□ -0.64
AP3S1-202ENST00000395548 ONECUT3O60422 494 aaPredicted RBP11.06□□□□□ -0.64
AP3S1-202ENST00000395548 MRPL50Q8N5N7 158 aaKnown RBP11.06□□□□□ -0.64
AP3S1-202ENST00000395548 RABGEF1Q9UJ41 708 aa11.06□□□□□ -0.64
AP3S1-202ENST00000395548 GOLGA8CPA6NN73 597 aa11.05□□□□□ -0.64
AP3S1-202ENST00000395548 HCSTQ9UBK5 93 aa11.05□□□□□ -0.64
AP3S1-202ENST00000395548 PROX2Q3B8N5 592 aa11.04□□□□□ -0.64
AP3S1-202ENST00000395548 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
AP3S1-202ENST00000395548 OSBPP22059 807 aa11.03□□□□□ -0.64
AP3S1-202ENST00000395548 TSR1Q2NL82 804 aaKnown RBP11.03□□□□□ -0.64
AP3S1-202ENST00000395548 CERKQ8TCT0 537 aa11.03□□□□□ -0.64
AP3S1-202ENST00000395548 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
AP3S1-202ENST00000395548 SLC24A1O60721 1099 aa11.02□□□□□ -0.65
AP3S1-202ENST00000395548 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
AP3S1-202ENST00000395548 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
AP3S1-202ENST00000395548 KIAA1468Q9P260 1216 aa11.01□□□□□ -0.65
AP3S1-202ENST00000395548 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
AP3S1-202ENST00000395548 LAPTM4BQ86VI4 370 aa10.99□□□□□ -0.65
AP3S1-202ENST00000395548 FBXO41Q8TF61 875 aa10.99□□□□□ -0.65
AP3S1-202ENST00000395548 PRIM1P49642 420 aaKnown RBP10.98□□□□□ -0.65
AP3S1-202ENST00000395548 PACS2Q86VP3 889 aa10.98□□□□□ -0.65
AP3S1-202ENST00000395548 WNT2BQ93097 391 aa10.98□□□□□ -0.65
AP3S1-202ENST00000395548 LMTK3Q96Q04 1460 aa10.97□□□□□ -0.65
AP3S1-202ENST00000395548 MLLT3P42568 568 aaPredicted RBP10.96□□□□□ -0.65
AP3S1-202ENST00000395548 SOCS7O14512 581 aa10.95□□□□□ -0.66
AP3S1-202ENST00000395548 PRSS12P56730 875 aa10.95□□□□□ -0.66
AP3S1-202ENST00000395548 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
AP3S1-202ENST00000395548 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
AP3S1-202ENST00000395548 THSD4Q6ZMP0 1018 aa10.94□□□□□ -0.66
AP3S1-202ENST00000395548 ANKK1Q8NFD2 765 aa10.93□□□□□ -0.66
AP3S1-202ENST00000395548 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
AP3S1-202ENST00000395548 PTPN5P54829 565 aa10.92□□□□□ -0.66
AP3S1-202ENST00000395548 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
AP3S1-202ENST00000395548 TSKSQ9UJT2 592 aa10.92□□□□□ -0.66
AP3S1-202ENST00000395548 SMARCA4P51532 1647 aa10.91□□□□□ -0.66
AP3S1-202ENST00000395548 SEMA3EO15041 775 aa10.91□□□□□ -0.66
AP3S1-202ENST00000395548 FAM98CQ17RN3 349 aaKnown RBP10.91□□□□□ -0.66
AP3S1-202ENST00000395548 RBM27Q9P2N5 1060 aaKnown RBP10.91□□□□□ -0.66
AP3S1-202ENST00000395548 SEPT9Q9UHD8 586 aaPredicted RBP10.91□□□□□ -0.66
AP3S1-202ENST00000395548 ZFRQ96KR1 1074 aaKnown RBP10.9□□□□□ -0.66
AP3S1-202ENST00000395548 ERCC6L2Q5T890 1561 aa10.89□□□□□ -0.67
AP3S1-202ENST00000395548 FANCD2Q9BXW9 1451 aa10.88□□□□□ -0.67
AP3S1-202ENST00000395548 SMYD5Q6GMV2 418 aa10.88□□□□□ -0.67
AP3S1-202ENST00000395548 NPDC1Q9NQX5 325 aaPredicted RBP10.88□□□□□ -0.67
AP3S1-202ENST00000395548 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
AP3S1-202ENST00000395548 SOWAHBA6NEL2 793 aa10.86□□□□□ -0.67
AP3S1-202ENST00000395548 TESPA1A2RU30 521 aaPredicted RBP10.85□□□□□ -0.67
AP3S1-202ENST00000395548 TATDN2Q93075 761 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms