RNA–Protein interactions for RNA: ENST00000395397.7

NR1H3-201, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-201ENST00000395397 PRKRIP1Q9H875 184 aaPredicted RBP18.64■□□□□ 0.58
NR1H3-201ENST00000395397 ASXL2Q76L83 1435 aa18.64■□□□□ 0.57
NR1H3-201ENST00000395397 MYO5CQ9NQX4 1742 aa18.64■□□□□ 0.57
NR1H3-201ENST00000395397 ARAP3Q8WWN8 1544 aa18.64■□□□□ 0.57
NR1H3-201ENST00000395397 COL17A1Q9UMD9 1497 aaPredicted RBP18.63■□□□□ 0.57
NR1H3-201ENST00000395397 ARHGAP5Q13017 1502 aa18.63■□□□□ 0.57
NR1H3-201ENST00000395397 FAM135AQ9P2D6 1515 aa18.63■□□□□ 0.57
NR1H3-201ENST00000395397 ATP10AO60312 1499 aa18.62■□□□□ 0.57
NR1H3-201ENST00000395397 SYCP2Q9BX26 1530 aa18.61■□□□□ 0.57
NR1H3-201ENST00000395397 KDM5CP41229 1560 aa18.61■□□□□ 0.57
NR1H3-201ENST00000395397 ROCK2O75116 1388 aaKnown RBP18.6■□□□□ 0.57
NR1H3-201ENST00000395397 USP47Q96K76 1375 aa18.6■□□□□ 0.57
NR1H3-201ENST00000395397 DUOX2Q9NRD8 1548 aa18.59■□□□□ 0.57
NR1H3-201ENST00000395397 MAGI2Q86UL8 1455 aa18.59■□□□□ 0.57
NR1H3-201ENST00000395397 EFCAB2Q5VUJ9 269 aa18.59■□□□□ 0.57
NR1H3-201ENST00000395397 ERBINQ96RT1 1412 aa18.58■□□□□ 0.57
NR1H3-201ENST00000395397 ZCCHC11Q5TAX3 1644 aaKnown RBP18.57■□□□□ 0.56
NR1H3-201ENST00000395397 IQGAP3Q86VI3 1631 aa18.56■□□□□ 0.56
NR1H3-201ENST00000395397 RTEL1-TNFRSF6BF6WH68 1400 aa18.56■□□□□ 0.56
NR1H3-201ENST00000395397 DHX29Q7Z478 1369 aaKnown RBP18.54■□□□□ 0.56
NR1H3-201ENST00000395397 PLA2R1Q13018 1463 aa18.53■□□□□ 0.56
NR1H3-201ENST00000395397 BCORL1Q5H9F3 1711 aa18.53■□□□□ 0.56
NR1H3-201ENST00000395397 MAP3K4Q9Y6R4 1608 aa18.53■□□□□ 0.56
NR1H3-201ENST00000395397 ABCC1P33527 1531 aa18.52■□□□□ 0.55
NR1H3-201ENST00000395397 CCDC144AA2RUR9 1427 aa18.51■□□□□ 0.55
NR1H3-201ENST00000395397 GPRASP1Q5JY77 1395 aa18.51■□□□□ 0.55
NR1H3-201ENST00000395397 KTN1Q86UP2 1357 aaKnown RBP18.5■□□□□ 0.55
NR1H3-201ENST00000395397 NEFLP07196 543 aa18.49■□□□□ 0.55
NR1H3-201ENST00000395397 ERICH6BQ5W0A0 696 aa18.49■□□□□ 0.55
NR1H3-201ENST00000395397 CARD11Q9BXL7 1154 aa18.49■□□□□ 0.55
NR1H3-201ENST00000395397 LAMC1P11047 1609 aa18.49■□□□□ 0.55
NR1H3-201ENST00000395397 PRAG1Q86YV5 1406 aa18.48■□□□□ 0.55
NR1H3-201ENST00000395397 HNRNPUQ00839 825 aaKnown RBP eCLIP18.48■□□□□ 0.55
NR1H3-201ENST00000395397 STAC3Q96MF2 364 aa18.48■□□□□ 0.55
NR1H3-201ENST00000395397 FKBP8Q14318 412 aa18.47■□□□□ 0.55
NR1H3-201ENST00000395397 DCAF11Q8TEB1 546 aa18.47■□□□□ 0.55
NR1H3-201ENST00000395397 CCDC184Q52MB2 194 aa18.45■□□□□ 0.54
NR1H3-201ENST00000395397 ZBED9Q6R2W3 1325 aa18.45■□□□□ 0.54
NR1H3-201ENST00000395397 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
NR1H3-201ENST00000395397 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
NR1H3-201ENST00000395397 TRAPPC8Q9Y2L5 1435 aa18.43■□□□□ 0.54
NR1H3-201ENST00000395397 WDR7Q9Y4E6 1490 aa18.42■□□□□ 0.54
NR1H3-201ENST00000395397 ZNF326Q5BKZ1 582 aaKnown RBP18.42■□□□□ 0.54
NR1H3-201ENST00000395397 A2MP01023 1474 aa18.41■□□□□ 0.54
NR1H3-201ENST00000395397 ST20-MTHFSA0A0A6YYL1 179 aa18.41■□□□□ 0.54
NR1H3-201ENST00000395397 ABCA9Q8IUA7 1624 aa18.4■□□□□ 0.54
NR1H3-201ENST00000395397 EIF2AK4Q9P2K8 1649 aaKnown RBP18.4■□□□□ 0.54
NR1H3-201ENST00000395397 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.54
NR1H3-201ENST00000395397 SPAG9O60271 1321 aaKnown RBP18.39■□□□□ 0.53
NR1H3-201ENST00000395397 PTPRTO14522 1441 aa18.39■□□□□ 0.53
NR1H3-201ENST00000395397 WASHC2CQ9Y4E1 1318 aa18.38■□□□□ 0.53
NR1H3-201ENST00000395397 RALBP1Q15311 655 aa18.38■□□□□ 0.53
NR1H3-201ENST00000395397 NEURL4Q96JN8 1562 aa18.38■□□□□ 0.53
NR1H3-201ENST00000395397 DEPDC5O75140 1603 aa18.37■□□□□ 0.53
NR1H3-201ENST00000395397 PRDM15P57071 1507 aaPredicted RBP18.37■□□□□ 0.53
NR1H3-201ENST00000395397 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
NR1H3-201ENST00000395397 E9PCH4 1651 aa18.36■□□□□ 0.53
NR1H3-201ENST00000395397 LMTK3Q96Q04 1460 aa18.36■□□□□ 0.53
NR1H3-201ENST00000395397 VWDEQ8N2E2 1590 aa18.36■□□□□ 0.53
NR1H3-201ENST00000395397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■□□□ 11.6
NR1H3-201ENST00000395397 TSHZ2Q9NRE2 1034 aa18.34■□□□□ 0.53
NR1H3-201ENST00000395397 BRD4O60885 1362 aaPredicted RBP18.33■□□□□ 0.53
NR1H3-201ENST00000395397 INO80Q9ULG1 1556 aaPredicted RBP18.33■□□□□ 0.52
NR1H3-201ENST00000395397 TRPM2O94759 1503 aa18.33■□□□□ 0.52
NR1H3-201ENST00000395397 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
NR1H3-201ENST00000395397 FANCAO15360 1455 aa18.32■□□□□ 0.52
NR1H3-201ENST00000395397 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
NR1H3-201ENST00000395397 PNISRQ8TF01 805 aaKnown RBP18.32■□□□□ 0.52
NR1H3-201ENST00000395397 AFAP1Q8N556 730 aa18.31■□□□□ 0.52
NR1H3-201ENST00000395397 TESK2Q96S53 571 aa18.3■□□□□ 0.52
NR1H3-201ENST00000395397 ATP7AQ04656 1500 aa18.3■□□□□ 0.52
NR1H3-201ENST00000395397 TET3O43151 1660 aa18.3■□□□□ 0.52
NR1H3-201ENST00000395397 INSRP06213 1382 aa18.3■□□□□ 0.52
NR1H3-201ENST00000395397 LRPPRCP42704 1394 aaKnown RBP18.3■□□□□ 0.52
NR1H3-201ENST00000395397 PER1O15534 1290 aaPredicted RBP18.29■□□□□ 0.52
NR1H3-201ENST00000395397 NBPF1Q3BBV0 1214 aa18.29■□□□□ 0.52
NR1H3-201ENST00000395397 MYBBP1AQ9BQG0 1328 aaKnown RBP18.29■□□□□ 0.52
NR1H3-201ENST00000395397 PTPRMP28827 1452 aa18.28■□□□□ 0.52
NR1H3-201ENST00000395397 SMG6Q86US8 1419 aaKnown RBP18.28■□□□□ 0.52
NR1H3-201ENST00000395397 RNF17Q9BXT8 1623 aaKnown RBP18.28■□□□□ 0.52
NR1H3-201ENST00000395397 RGL3Q3MIN7 710 aa18.28■□□□□ 0.52
NR1H3-201ENST00000395397 SCAPERQ9BY12 1400 aa18.28■□□□□ 0.52
NR1H3-201ENST00000395397 KANK1Q14678 1352 aa18.27■□□□□ 0.52
NR1H3-201ENST00000395397 PARD3Q8TEW0 1356 aa18.27■□□□□ 0.51
NR1H3-201ENST00000395397 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
NR1H3-201ENST00000395397 CEP152O94986 1710 aa18.24■□□□□ 0.51
NR1H3-201ENST00000395397 SPHKAPQ2M3C7 1700 aa18.24■□□□□ 0.51
NR1H3-201ENST00000395397 TMC1Q8TDI8 760 aa18.23■□□□□ 0.51
NR1H3-201ENST00000395397 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
NR1H3-201ENST00000395397 ADAMTSL3P82987 1691 aa18.23■□□□□ 0.51
NR1H3-201ENST00000395397 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
NR1H3-201ENST00000395397 BCANQ96GW7 911 aa18.23■□□□□ 0.51
NR1H3-201ENST00000395397 MADDQ8WXG6 1647 aa18.22■□□□□ 0.51
NR1H3-201ENST00000395397 LMTK2Q8IWU2 1503 aa18.22■□□□□ 0.51
NR1H3-201ENST00000395397 TMF1P82094 1093 aa18.22■□□□□ 0.51
NR1H3-201ENST00000395397 PPP4R2Q9NY27 417 aa18.22■□□□□ 0.51
NR1H3-201ENST00000395397 KIAA1210Q9ULL0 1709 aa18.21■□□□□ 0.51
NR1H3-201ENST00000395397 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
NR1H3-201ENST00000395397 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
NR1H3-201ENST00000395397 MROH1Q8NDA8 1641 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms