RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 MLECQ14165 292 aa14.9□□□□□ -0.02
RAPGEF3-202ENST00000395358 NUP155O75694 1391 aa14.9□□□□□ -0.02
RAPGEF3-202ENST00000395358 GPATCH8Q9UKJ3 1502 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-202ENST00000395358 SCAPERQ9BY12 1400 aa14.89□□□□□ -0.03
RAPGEF3-202ENST00000395358 NCLP19338 710 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-202ENST00000395358 CDK11BP21127 795 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-202ENST00000395358 KIF15Q9NS87 1388 aa14.88□□□□□ -0.03
RAPGEF3-202ENST00000395358 KDM5BQ9UGL1 1544 aa14.86□□□□□ -0.03
RAPGEF3-202ENST00000395358 L1TD1Q5T7N2 865 aaKnown RBP14.86□□□□□ -0.03
RAPGEF3-202ENST00000395358 MPHOSPH9Q99550 1183 aa14.86□□□□□ -0.03
RAPGEF3-202ENST00000395358 PLCH2O75038 1416 aa14.86□□□□□ -0.03
RAPGEF3-202ENST00000395358 PKD2Q13563 968 aa14.85□□□□□ -0.03
RAPGEF3-202ENST00000395358 CAMSAP2Q08AD1 1489 aa14.85□□□□□ -0.03
RAPGEF3-202ENST00000395358 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
RAPGEF3-202ENST00000395358 C9orf84Q5VXU9 1444 aa14.85□□□□□ -0.03
RAPGEF3-202ENST00000395358 RAPGEF3O95398 923 aa14.85□□□□□ -0.03
RAPGEF3-202ENST00000395358 DAPK1P53355 1430 aa14.85□□□□□ -0.03
RAPGEF3-202ENST00000395358 PTPN23Q9H3S7 1636 aa14.85□□□□□ -0.03
RAPGEF3-202ENST00000395358 FANCAO15360 1455 aa14.84□□□□□ -0.03
RAPGEF3-202ENST00000395358 C11orf95C9JLR9 678 aaPredicted RBP14.83□□□□□ -0.03
RAPGEF3-202ENST00000395358 BCL11BQ9C0K0 894 aaPredicted RBP14.83□□□□□ -0.04
RAPGEF3-202ENST00000395358 ADGRL1O94910 1474 aa14.83□□□□□ -0.04
RAPGEF3-202ENST00000395358 ANKRD50Q9ULJ7 1429 aa14.82□□□□□ -0.04
RAPGEF3-202ENST00000395358 CCDC141Q6ZP82 1450 aa14.82□□□□□ -0.04
RAPGEF3-202ENST00000395358 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
RAPGEF3-202ENST00000395358 MRS2Q9HD23 443 aa14.81□□□□□ -0.04
RAPGEF3-202ENST00000395358 WASHC2CQ9Y4E1 1318 aa14.81□□□□□ -0.04
RAPGEF3-202ENST00000395358 NFKBIBQ15653 356 aa14.81□□□□□ -0.04
RAPGEF3-202ENST00000395358 SIN3AQ96ST3 1273 aa14.81□□□□□ -0.04
RAPGEF3-202ENST00000395358 ANP32BQ92688 251 aaKnown RBP14.8□□□□□ -0.04
RAPGEF3-202ENST00000395358 AKNAQ7Z591 1439 aa14.8□□□□□ -0.04
RAPGEF3-202ENST00000395358 RGL3Q3MIN7 710 aa14.79□□□□□ -0.04
RAPGEF3-202ENST00000395358 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
RAPGEF3-202ENST00000395358 ABCC5O15440 1437 aa14.79□□□□□ -0.04
RAPGEF3-202ENST00000395358 ITSN2Q9NZM3 1697 aa14.79□□□□□ -0.04
RAPGEF3-202ENST00000395358 FOXD1Q16676 465 aa14.79□□□□□ -0.04
RAPGEF3-202ENST00000395358 MAGI3Q5TCQ9 1506 aa14.79□□□□□ -0.04
RAPGEF3-202ENST00000395358 SLC4A3P48751 1232 aa14.79□□□□□ -0.04
RAPGEF3-202ENST00000395358 FGD1P98174 961 aa14.78□□□□□ -0.04
RAPGEF3-202ENST00000395358 ROCK1Q13464 1354 aa14.77□□□□□ -0.04
RAPGEF3-202ENST00000395358 HFM1A2PYH4 1435 aa14.77□□□□□ -0.04
RAPGEF3-202ENST00000395358 SENP3-EIF4A1A0A087X0R7 540 aa14.77□□□□□ -0.05
RAPGEF3-202ENST00000395358 CANXP27824 592 aaKnown RBP14.77□□□□□ -0.05
RAPGEF3-202ENST00000395358 TEX14Q8IWB6 1497 aa14.76□□□□□ -0.05
RAPGEF3-202ENST00000395358 ZCCHC11Q5TAX3 1644 aaKnown RBP14.76□□□□□ -0.05
RAPGEF3-202ENST00000395358 DENND4BO75064 1496 aaPredicted RBP14.76□□□□□ -0.05
RAPGEF3-202ENST00000395358 KIAA1107Q9UPP5 1409 aa14.74□□□□□ -0.05
RAPGEF3-202ENST00000395358 DHX57Q6P158 1386 aaKnown RBP14.74□□□□□ -0.05
RAPGEF3-202ENST00000395358 RIMBP3CA6NJZ7 1639 aa14.73□□□□□ -0.05
RAPGEF3-202ENST00000395358 RIMBP3BA6NNM3 1639 aa14.73□□□□□ -0.05
RAPGEF3-202ENST00000395358 RIMBP3Q9UFD9 1639 aa14.73□□□□□ -0.05
RAPGEF3-202ENST00000395358 WASHC2AQ641Q2 1341 aa14.73□□□□□ -0.05
RAPGEF3-202ENST00000395358 AAMPQ13685 434 aa14.73□□□□□ -0.05
RAPGEF3-202ENST00000395358 BBXQ8WY36 941 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-202ENST00000395358 TCOF1Q13428 1488 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-202ENST00000395358 NAIPQ13075 1403 aa14.72□□□□□ -0.05
RAPGEF3-202ENST00000395358 NCOA1Q15788 1441 aa14.71□□□□□ -0.05
RAPGEF3-202ENST00000395358 TCERG1O14776 1098 aaKnown RBP14.71□□□□□ -0.05
RAPGEF3-202ENST00000395358 RGS3P49796 1198 aa14.71□□□□□ -0.05
RAPGEF3-202ENST00000395358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.71□□□□□ -0.06
RAPGEF3-202ENST00000395358 ABCC10Q5T3U5 1492 aa14.7□□□□□ -0.06
RAPGEF3-202ENST00000395358 PDE4AP27815 886 aa14.7□□□□□ -0.06
RAPGEF3-202ENST00000395358 ADCY10Q96PN6 1610 aa14.7□□□□□ -0.06
RAPGEF3-202ENST00000395358 PPP1R15AO75807 674 aaPredicted RBP14.7□□□□□ -0.06
RAPGEF3-202ENST00000395358 SYCP2Q9BX26 1530 aa14.7□□□□□ -0.06
RAPGEF3-202ENST00000395358 GZF1Q9H116 711 aaPredicted RBP14.69□□□□□ -0.06
RAPGEF3-202ENST00000395358 TRAPPC8Q9Y2L5 1435 aa14.67□□□□□ -0.06
RAPGEF3-202ENST00000395358 GOLGA6L3A6NEY3 463 aa14.67□□□□□ -0.06
RAPGEF3-202ENST00000395358 ZNF518AQ6AHZ1 1483 aa14.67□□□□□ -0.06
RAPGEF3-202ENST00000395358 DCAF11Q8TEB1 546 aa14.66□□□□□ -0.06
RAPGEF3-202ENST00000395358 FAM13BQ9NYF5 915 aa14.66□□□□□ -0.06
RAPGEF3-202ENST00000395358 PTPRKQ15262 1439 aa14.66□□□□□ -0.06
RAPGEF3-202ENST00000395358 BECN1Q14457 450 aa14.64□□□□□ -0.07
RAPGEF3-202ENST00000395358 FRAT2O75474 233 aaPredicted RBP14.63□□□□□ -0.07
RAPGEF3-202ENST00000395358 NEO1Q92859 1461 aa14.63□□□□□ -0.07
RAPGEF3-202ENST00000395358 CCDC144AA2RUR9 1427 aa14.63□□□□□ -0.07
RAPGEF3-202ENST00000395358 MYO5CQ9NQX4 1742 aa14.63□□□□□ -0.07
RAPGEF3-202ENST00000395358 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
RAPGEF3-202ENST00000395358 TTC37Q6PGP7 1564 aa14.62□□□□□ -0.07
RAPGEF3-202ENST00000395358 TAF7LQ5H9L4 462 aa14.62□□□□□ -0.07
RAPGEF3-202ENST00000395358 DHX29Q7Z478 1369 aaKnown RBP14.62□□□□□ -0.07
RAPGEF3-202ENST00000395358 MYH16Q9H6N6 1097 aa14.61□□□□□ -0.07
RAPGEF3-202ENST00000395358 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
RAPGEF3-202ENST00000395358 SENP3Q9H4L4 574 aaPredicted RBP14.61□□□□□ -0.07
RAPGEF3-202ENST00000395358 SLKQ9H2G2 1235 aaPredicted RBP14.6□□□□□ -0.07
RAPGEF3-202ENST00000395358 SHANK2Q9UPX8 1470 aa14.6□□□□□ -0.07
RAPGEF3-202ENST00000395358 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
RAPGEF3-202ENST00000395358 RTEL1-TNFRSF6BF6WH68 1400 aa14.59□□□□□ -0.07
RAPGEF3-202ENST00000395358 POGZQ7Z3K3 1410 aa14.59□□□□□ -0.07
RAPGEF3-202ENST00000395358 MSNP26038 577 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-202ENST00000395358 ZHX1Q9UKY1 873 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF3-202ENST00000395358 PDCL3Q9H2J4 239 aa14.59□□□□□ -0.07
RAPGEF3-202ENST00000395358 DNMT1P26358 1616 aaKnown RBP14.58□□□□□ -0.07
RAPGEF3-202ENST00000395358 L3MBTL2Q969R5 705 aa14.58□□□□□ -0.07
RAPGEF3-202ENST00000395358 NAP1L2Q9ULW6 460 aaPredicted RBP14.58□□□□□ -0.07
RAPGEF3-202ENST00000395358 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-202ENST00000395358 MAPKBP1O60336 1514 aa14.57□□□□□ -0.08
RAPGEF3-202ENST00000395358 TPM2P07951 284 aa14.57□□□□□ -0.08
RAPGEF3-202ENST00000395358 CARD11Q9BXL7 1154 aa14.57□□□□□ -0.08
RAPGEF3-202ENST00000395358 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms