RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 BCANQ96GW7 911 aa17.37■□□□□ 0.37
RTN1-203ENST00000395090 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
RTN1-203ENST00000395090 PHLDB1Q86UU1 1377 aa17.37■□□□□ 0.37
RTN1-203ENST00000395090 TROQ12816 1431 aaPredicted RBP17.36■□□□□ 0.37
RTN1-203ENST00000395090 RRBP1Q9P2E9 1410 aaKnown RBP17.36■□□□□ 0.37
RTN1-203ENST00000395090 TMEM106CQ9BVX2 250 aa17.36■□□□□ 0.37
RTN1-203ENST00000395090 NCOA2Q15596 1464 aa17.35■□□□□ 0.37
RTN1-203ENST00000395090 SOX12O15370 315 aa17.35■□□□□ 0.37
RTN1-203ENST00000395090 SUPT6HQ7KZ85 1726 aaKnown RBP17.33■□□□□ 0.37
RTN1-203ENST00000395090 TRPC6Q9Y210 931 aa17.33■□□□□ 0.37
RTN1-203ENST00000395090 ADCY10Q96PN6 1610 aa17.32■□□□□ 0.36
RTN1-203ENST00000395090 NLRP6P59044 892 aa17.32■□□□□ 0.36
RTN1-203ENST00000395090 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
RTN1-203ENST00000395090 GOLGA2Q08379 1002 aa17.3■□□□□ 0.36
RTN1-203ENST00000395090 FBXO22Q8NEZ5 403 aa17.29■□□□□ 0.36
RTN1-203ENST00000395090 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
RTN1-203ENST00000395090 MYOM3Q5VTT5 1437 aa17.28■□□□□ 0.36
RTN1-203ENST00000395090 RIMBP3CA6NJZ7 1639 aa17.28■□□□□ 0.36
RTN1-203ENST00000395090 RIMBP3BA6NNM3 1639 aa17.28■□□□□ 0.36
RTN1-203ENST00000395090 RIMBP3Q9UFD9 1639 aa17.28■□□□□ 0.36
RTN1-203ENST00000395090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
RTN1-203ENST00000395090 ZCCHC11Q5TAX3 1644 aaKnown RBP17.27■□□□□ 0.36
RTN1-203ENST00000395090 TIE1P35590 1138 aa17.27■□□□□ 0.36
RTN1-203ENST00000395090 EVX2Q03828 476 aa17.26■□□□□ 0.35
RTN1-203ENST00000395090 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
RTN1-203ENST00000395090 CLCN6P51797 869 aa17.25■□□□□ 0.35
RTN1-203ENST00000395090 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
RTN1-203ENST00000395090 MIA2Q96PC5 1412 aa17.24■□□□□ 0.35
RTN1-203ENST00000395090 ABCC10Q5T3U5 1492 aa17.23■□□□□ 0.35
RTN1-203ENST00000395090 GALR2O43603 387 aaPredicted RBP17.23■□□□□ 0.35
RTN1-203ENST00000395090 KIF14Q15058 1648 aa17.22■□□□□ 0.35
RTN1-203ENST00000395090 GPATCH8Q9UKJ3 1502 aaKnown RBP17.21■□□□□ 0.35
RTN1-203ENST00000395090 TTLL13PA6NNM8 815 aa17.21■□□□□ 0.35
RTN1-203ENST00000395090 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
RTN1-203ENST00000395090 PPP1R37O75864 691 aa17.19■□□□□ 0.34
RTN1-203ENST00000395090 BMP2KQ9NSY1 1161 aaPredicted RBP17.18■□□□□ 0.34
RTN1-203ENST00000395090 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
RTN1-203ENST00000395090 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
RTN1-203ENST00000395090 WDR7Q9Y4E6 1490 aa17.17■□□□□ 0.34
RTN1-203ENST00000395090 ASXL2Q76L83 1435 aa17.17■□□□□ 0.34
RTN1-203ENST00000395090 KCNH8Q96L42 1107 aa17.17■□□□□ 0.34
RTN1-203ENST00000395090 CADPS2Q86UW7 1296 aa17.16■□□□□ 0.34
RTN1-203ENST00000395090 CFDP1Q9UEE9 299 aaPredicted RBP17.16■□□□□ 0.34
RTN1-203ENST00000395090 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
RTN1-203ENST00000395090 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.34
RTN1-203ENST00000395090 MS4A4AQ96JQ5 239 aa17.14■□□□□ 0.33
RTN1-203ENST00000395090 ITSN2Q9NZM3 1697 aa17.12■□□□□ 0.33
RTN1-203ENST00000395090 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
RTN1-203ENST00000395090 CDC42BPAQ5VT25 1732 aa17.11■□□□□ 0.33
RTN1-203ENST00000395090 TRIM35Q9UPQ4 493 aa17.1■□□□□ 0.33
RTN1-203ENST00000395090 PLCH2O75038 1416 aa17.09■□□□□ 0.33
RTN1-203ENST00000395090 TTC37Q6PGP7 1564 aa17.09■□□□□ 0.33
RTN1-203ENST00000395090 MAPKBP1O60336 1514 aa17.09■□□□□ 0.33
RTN1-203ENST00000395090 ITGAEP38570 1179 aa17.08■□□□□ 0.32
RTN1-203ENST00000395090 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
RTN1-203ENST00000395090 WDR70Q9NW82 654 aa17.07■□□□□ 0.32
RTN1-203ENST00000395090 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
RTN1-203ENST00000395090 CDC42BPBQ9Y5S2 1711 aa17.06■□□□□ 0.32
RTN1-203ENST00000395090 ABCA9Q8IUA7 1624 aa17.05■□□□□ 0.32
RTN1-203ENST00000395090 CAMSAP2Q08AD1 1489 aa17.05■□□□□ 0.32
RTN1-203ENST00000395090 NBR1Q14596 966 aa17.05■□□□□ 0.32
RTN1-203ENST00000395090 POTEHQ6S545 545 aa17.05■□□□□ 0.32
RTN1-203ENST00000395090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
RTN1-203ENST00000395090 ARAP3Q8WWN8 1544 aa17.05■□□□□ 0.32
RTN1-203ENST00000395090 ZNF777Q9ULD5 760 aaPredicted RBP17.04■□□□□ 0.32
RTN1-203ENST00000395090 EFCAB2Q5VUJ9 269 aa17.03■□□□□ 0.32
RTN1-203ENST00000395090 MYO5CQ9NQX4 1742 aa17.03■□□□□ 0.32
RTN1-203ENST00000395090 ABCC5O15440 1437 aa17.02■□□□□ 0.32
RTN1-203ENST00000395090 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.31
RTN1-203ENST00000395090 ILDR1Q86SU0 546 aaPredicted RBP17.02■□□□□ 0.31
RTN1-203ENST00000395090 DAPK1P53355 1430 aa17.01■□□□□ 0.31
RTN1-203ENST00000395090 KIAA1107Q9UPP5 1409 aa17.01■□□□□ 0.31
RTN1-203ENST00000395090 ARHGAP5Q13017 1502 aa17.01■□□□□ 0.31
RTN1-203ENST00000395090 MBD5Q9P267 1494 aa17■□□□□ 0.31
RTN1-203ENST00000395090 ATN1P54259 1190 aaPredicted RBP17■□□□□ 0.31
RTN1-203ENST00000395090 DNMT1P26358 1616 aaKnown RBP17■□□□□ 0.31
RTN1-203ENST00000395090 HRCP23327 699 aa16.99■□□□□ 0.31
RTN1-203ENST00000395090 ASTLQ6HA08 431 aaPredicted RBP16.99■□□□□ 0.31
RTN1-203ENST00000395090 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
RTN1-203ENST00000395090 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
RTN1-203ENST00000395090 SETD5Q9C0A6 1442 aa16.98■□□□□ 0.31
RTN1-203ENST00000395090 ATMINO43313 823 aaPredicted RBP16.98■□□□□ 0.31
RTN1-203ENST00000395090 GABBR2O75899 941 aa16.98■□□□□ 0.31
RTN1-203ENST00000395090 ROCK1Q13464 1354 aa16.97■□□□□ 0.31
RTN1-203ENST00000395090 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.31
RTN1-203ENST00000395090 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
RTN1-203ENST00000395090 CD109Q6YHK3 1445 aa16.97■□□□□ 0.31
RTN1-203ENST00000395090 GLI2P10070 1586 aa16.97■□□□□ 0.31
RTN1-203ENST00000395090 AKNAQ7Z591 1439 aa16.96■□□□□ 0.31
RTN1-203ENST00000395090 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.31
RTN1-203ENST00000395090 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
RTN1-203ENST00000395090 FANCAO15360 1455 aa16.94■□□□□ 0.3
RTN1-203ENST00000395090 NAIPQ13075 1403 aa16.94■□□□□ 0.3
RTN1-203ENST00000395090 RAB3GAP2Q9H2M9 1393 aa16.94■□□□□ 0.3
RTN1-203ENST00000395090 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
RTN1-203ENST00000395090 ARHGEF12Q9NZN5 1544 aa16.92■□□□□ 0.3
RTN1-203ENST00000395090 TSPY4P0CV99 314 aa16.92■□□□□ 0.3
RTN1-203ENST00000395090 TSPY10P0CW01 314 aa16.92■□□□□ 0.3
RTN1-203ENST00000395090 NCOA1Q15788 1441 aa16.92■□□□□ 0.3
RTN1-203ENST00000395090 FAM69CQ0P6D2 419 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms