RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 HAP1P54257 671 aaPredicted RBP19.35■□□□□ 0.69
SPOCK1-202ENST00000394945 NOL8Q76FK4 1167 aaKnown RBP19.34■□□□□ 0.69
SPOCK1-202ENST00000394945 COG6Q9Y2V7 657 aa19.34■□□□□ 0.69
SPOCK1-202ENST00000394945 R3HCC1Q9Y3T6 440 aaKnown RBP19.33■□□□□ 0.68
SPOCK1-202ENST00000394945 HTATSF1O43719 755 aaKnown RBP19.32■□□□□ 0.68
SPOCK1-202ENST00000394945 POGKQ9P215 609 aa19.32■□□□□ 0.68
SPOCK1-202ENST00000394945 TPM2P07951 284 aa19.31■□□□□ 0.68
SPOCK1-202ENST00000394945 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
SPOCK1-202ENST00000394945 C14orf37Q86TY3 774 aa19.31■□□□□ 0.68
SPOCK1-202ENST00000394945 MTERF4Q7Z6M4 381 aaKnown RBP19.3■□□□□ 0.68
SPOCK1-202ENST00000394945 PODXL2Q9NZ53 605 aa19.3■□□□□ 0.68
SPOCK1-202ENST00000394945 ST20-MTHFSA0A0A6YYL1 179 aa19.29■□□□□ 0.68
SPOCK1-202ENST00000394945 BCL2L13Q9BXK5 485 aa19.28■□□□□ 0.68
SPOCK1-202ENST00000394945 GOLGA6L1Q8N7Z2 621 aa19.28■□□□□ 0.68
SPOCK1-202ENST00000394945 PLEKHG5O94827 1062 aa19.27■□□□□ 0.68
SPOCK1-202ENST00000394945 TRAK2O60296 914 aa19.27■□□□□ 0.68
SPOCK1-202ENST00000394945 BACH2Q9BYV9 841 aa19.26■□□□□ 0.67
SPOCK1-202ENST00000394945 RRP9O43818 475 aaKnown RBP19.26■□□□□ 0.67
SPOCK1-202ENST00000394945 FOXD4L6Q3SYB3 417 aaPredicted RBP19.26■□□□□ 0.67
SPOCK1-202ENST00000394945 FOXD4L3Q6VB84 417 aaPredicted RBP19.26■□□□□ 0.67
SPOCK1-202ENST00000394945 NASPP49321 788 aaPredicted RBP19.25■□□□□ 0.67
SPOCK1-202ENST00000394945 E9PSI1 815 aa19.25■□□□□ 0.67
SPOCK1-202ENST00000394945 RAPGEF2Q9Y4G8 1499 aa19.24■□□□□ 0.67
SPOCK1-202ENST00000394945 TPM4P67936 248 aa19.24■□□□□ 0.67
SPOCK1-202ENST00000394945 NUP155O75694 1391 aa19.24■□□□□ 0.67
SPOCK1-202ENST00000394945 TRIM6-TRIM34B2RNG4 842 aa19.24■□□□□ 0.67
SPOCK1-202ENST00000394945 SRPK2P78362 688 aaKnown RBP19.22■□□□□ 0.67
SPOCK1-202ENST00000394945 FANCD2Q9BXW9 1451 aa19.22■□□□□ 0.67
SPOCK1-202ENST00000394945 RBM10P98175 930 aaKnown RBP19.22■□□□□ 0.67
SPOCK1-202ENST00000394945 ANKRD45Q5TZF3 282 aa19.22■□□□□ 0.67
SPOCK1-202ENST00000394945 PANK3Q9H999 370 aa19.22■□□□□ 0.67
SPOCK1-202ENST00000394945 RRP7AQ9Y3A4 280 aaKnown RBP19.21■□□□□ 0.67
SPOCK1-202ENST00000394945 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
SPOCK1-202ENST00000394945 KIF16BQ96L93 1317 aa19.21■□□□□ 0.67
SPOCK1-202ENST00000394945 HMMRO75330 724 aa19.2■□□□□ 0.66
SPOCK1-202ENST00000394945 ZNF592Q92610 1267 aa19.2■□□□□ 0.66
SPOCK1-202ENST00000394945 ZKSCAN2Q63HK3 967 aa19.2■□□□□ 0.66
SPOCK1-202ENST00000394945 CCDC7Q96M83 1385 aa19.19■□□□□ 0.66
SPOCK1-202ENST00000394945 APAF1O14727 1248 aa19.19■□□□□ 0.66
SPOCK1-202ENST00000394945 GNL2Q13823 731 aaKnown RBP19.19■□□□□ 0.66
SPOCK1-202ENST00000394945 UBE2Q2Q8WVN8 375 aa19.18■□□□□ 0.66
SPOCK1-202ENST00000394945 SAFB2Q14151 953 aaKnown RBP eCLIP19.18■□□□□ 0.66
SPOCK1-202ENST00000394945 USP47Q96K76 1375 aa19.17■□□□□ 0.66
SPOCK1-202ENST00000394945 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
SPOCK1-202ENST00000394945 ATP6V1DQ9Y5K8 247 aa19.17■□□□□ 0.66
SPOCK1-202ENST00000394945 CNTLNQ9NXG0 1405 aa19.17■□□□□ 0.66
SPOCK1-202ENST00000394945 NUCB2P80303 420 aa19.16■□□□□ 0.66
SPOCK1-202ENST00000394945 CARMIL2Q6F5E8 1435 aa19.16■□□□□ 0.66
SPOCK1-202ENST00000394945 WASHC2AQ641Q2 1341 aa19.16■□□□□ 0.66
SPOCK1-202ENST00000394945 KIF7Q2M1P5 1343 aa19.16■□□□□ 0.66
SPOCK1-202ENST00000394945 MCTP1Q6DN14 999 aa19.16■□□□□ 0.66
SPOCK1-202ENST00000394945 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
SPOCK1-202ENST00000394945 GOLGA6L19H0YKK7 550 aa19.15■□□□□ 0.66
SPOCK1-202ENST00000394945 ESPNB1AK53 854 aa19.14■□□□□ 0.65
SPOCK1-202ENST00000394945 DIAPH3Q9NSV4 1193 aa19.14■□□□□ 0.65
SPOCK1-202ENST00000394945 AKNAQ7Z591 1439 aa19.13■□□□□ 0.65
SPOCK1-202ENST00000394945 TULP1O00294 542 aaPredicted RBP19.13■□□□□ 0.65
SPOCK1-202ENST00000394945 CCDC39Q9UFE4 941 aa19.13■□□□□ 0.65
SPOCK1-202ENST00000394945 RTF1Q92541 710 aaKnown RBP19.13■□□□□ 0.65
SPOCK1-202ENST00000394945 BECN2A8MW95 431 aa19.13■□□□□ 0.65
SPOCK1-202ENST00000394945 TEX35Q5T0J7 233 aa19.12■□□□□ 0.65
SPOCK1-202ENST00000394945 CCAR2Q8N163 923 aaKnown RBP19.11■□□□□ 0.65
SPOCK1-202ENST00000394945 CCDC173Q0VFZ6 552 aa19.11■□□□□ 0.65
SPOCK1-202ENST00000394945 RNF214Q8ND24 703 aa19.11■□□□□ 0.65
SPOCK1-202ENST00000394945 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
SPOCK1-202ENST00000394945 NOC3LQ8WTT2 800 aaKnown RBP19.1■□□□□ 0.65
SPOCK1-202ENST00000394945 HSP90B1P14625 803 aaKnown RBP19.1■□□□□ 0.65
SPOCK1-202ENST00000394945 GPS2Q13227 327 aa19.1■□□□□ 0.65
SPOCK1-202ENST00000394945 CDCA7LQ96GN5 454 aa19.1■□□□□ 0.65
SPOCK1-202ENST00000394945 ANKRD30AQ9BXX3 1397 aa19.1■□□□□ 0.65
SPOCK1-202ENST00000394945 ISY1Q9ULR0 285 aaKnown RBP19.09■□□□□ 0.65
SPOCK1-202ENST00000394945 DDX19BQ9UMR2 479 aa19.09■□□□□ 0.65
SPOCK1-202ENST00000394945 CCDC18Q5T9S5 1454 aa19.09■□□□□ 0.65
SPOCK1-202ENST00000394945 GRPEL1Q9HAV7 217 aa19.09■□□□□ 0.65
SPOCK1-202ENST00000394945 SOX12O15370 315 aa19.09■□□□□ 0.65
SPOCK1-202ENST00000394945 SLC4A10Q6U841 1118 aa19.08■□□□□ 0.65
SPOCK1-202ENST00000394945 A0A0G2JS52 829 aa19.08■□□□□ 0.65
SPOCK1-202ENST00000394945 REC8O95072 547 aa19.08■□□□□ 0.65
SPOCK1-202ENST00000394945 SETQ01105 290 aaPredicted RBP19.08■□□□□ 0.65
SPOCK1-202ENST00000394945 HMGN5P82970 282 aaKnown RBP19.07■□□□□ 0.64
SPOCK1-202ENST00000394945 DZIP1LQ8IYY4 767 aaKnown RBP19.07■□□□□ 0.64
SPOCK1-202ENST00000394945 CAVIN1Q6NZI2 390 aaKnown RBP19.07■□□□□ 0.64
SPOCK1-202ENST00000394945 HDGFL2Q7Z4V5 671 aaPredicted RBP19.07■□□□□ 0.64
SPOCK1-202ENST00000394945 MLECQ14165 292 aa19.07■□□□□ 0.64
SPOCK1-202ENST00000394945 IFT57Q9NWB7 429 aa19.06■□□□□ 0.64
SPOCK1-202ENST00000394945 TRHP20396 242 aaPredicted RBP19.06■□□□□ 0.64
SPOCK1-202ENST00000394945 PANK1Q8TE04 598 aa19.06■□□□□ 0.64
SPOCK1-202ENST00000394945 STK31Q9BXU1 1019 aa19.06■□□□□ 0.64
SPOCK1-202ENST00000394945 CCDC66A2RUB6 948 aa19.06■□□□□ 0.64
SPOCK1-202ENST00000394945 NGEFQ8N5V2 710 aa19.06■□□□□ 0.64
SPOCK1-202ENST00000394945 RILPL2Q969X0 211 aa19.05■□□□□ 0.64
SPOCK1-202ENST00000394945 LNPKQ9C0E8 428 aa19.05■□□□□ 0.64
SPOCK1-202ENST00000394945 TPM3P06753 285 aa19.05■□□□□ 0.64
SPOCK1-202ENST00000394945 SF3A1Q15459 793 aaKnown RBP19.05■□□□□ 0.64
SPOCK1-202ENST00000394945 ELL2O00472 640 aaPredicted RBP19.04■□□□□ 0.64
SPOCK1-202ENST00000394945 GGT6Q6P531 493 aa19.04■□□□□ 0.64
SPOCK1-202ENST00000394945 IGF1RP08069 1367 aa19.04■□□□□ 0.64
SPOCK1-202ENST00000394945 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
SPOCK1-202ENST00000394945 EIF3AQ14152 1382 aaKnown RBP19.03■□□□□ 0.64
SPOCK1-202ENST00000394945 KANK1Q14678 1352 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms