RNA–Protein interactions for RNA: ENST00000394825.5

NR4A1-204, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR4A1, Length 2,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-204ENST00000394825 PRKRIP1Q9H875 184 aaPredicted RBP21.6■■□□□ 1.05
NR4A1-204ENST00000394825 KDM6BO15054 1643 aa21.6■■□□□ 1.05
NR4A1-204ENST00000394825 ANKRD30AQ9BXX3 1397 aa21.59■■□□□ 1.05
NR4A1-204ENST00000394825 PLCH2O75038 1416 aa21.59■■□□□ 1.05
NR4A1-204ENST00000394825 CCDC141Q6ZP82 1450 aa21.58■■□□□ 1.05
NR4A1-204ENST00000394825 KIAA1107Q9UPP5 1409 aa21.58■■□□□ 1.04
NR4A1-204ENST00000394825 MRS2Q9HD23 443 aa21.58■■□□□ 1.04
NR4A1-204ENST00000394825 NPM2Q86SE8 214 aaKnown RBP21.57■■□□□ 1.04
NR4A1-204ENST00000394825 NUDCQ9Y266 331 aa21.57■■□□□ 1.04
NR4A1-204ENST00000394825 C9orf84Q5VXU9 1444 aa21.57■■□□□ 1.04
NR4A1-204ENST00000394825 MAST1Q9Y2H9 1570 aa21.55■■□□□ 1.04
NR4A1-204ENST00000394825 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
NR4A1-204ENST00000394825 TSPY4P0CV99 314 aa21.54■■□□□ 1.04
NR4A1-204ENST00000394825 TSPY10P0CW01 314 aa21.54■■□□□ 1.04
NR4A1-204ENST00000394825 PDE4AP27815 886 aa21.54■■□□□ 1.04
NR4A1-204ENST00000394825 FRAT1Q92837 279 aaPredicted RBP21.54■■□□□ 1.04
NR4A1-204ENST00000394825 BACH2Q9BYV9 841 aa21.54■■□□□ 1.04
NR4A1-204ENST00000394825 SYCP2Q9BX26 1530 aa21.53■■□□□ 1.04
NR4A1-204ENST00000394825 MS4A1P11836 297 aa21.52■■□□□ 1.04
NR4A1-204ENST00000394825 ASXL2Q76L83 1435 aa21.52■■□□□ 1.04
NR4A1-204ENST00000394825 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
NR4A1-204ENST00000394825 HSPA5P11021 654 aaKnown RBP21.51■■□□□ 1.03
NR4A1-204ENST00000394825 NFKBIBQ15653 356 aa21.51■■□□□ 1.03
NR4A1-204ENST00000394825 EFCAB2Q5VUJ9 269 aa21.51■■□□□ 1.03
NR4A1-204ENST00000394825 DDRGK1Q96HY6 314 aa21.51■■□□□ 1.03
NR4A1-204ENST00000394825 HNRNPMP52272 730 aaKnown RBP eCLIP21.49■■□□□ 1.03
NR4A1-204ENST00000394825 ABCC1P33527 1531 aa21.49■■□□□ 1.03
NR4A1-204ENST00000394825 ANKRD50Q9ULJ7 1429 aa21.47■■□□□ 1.03
NR4A1-204ENST00000394825 PLXNC1O60486 1568 aa21.46■■□□□ 1.03
NR4A1-204ENST00000394825 ZMYND15Q9H091 742 aa21.46■■□□□ 1.03
NR4A1-204ENST00000394825 DENND4BO75064 1496 aaPredicted RBP21.44■■□□□ 1.02
NR4A1-204ENST00000394825 MPHOSPH9Q99550 1183 aa21.44■■□□□ 1.02
NR4A1-204ENST00000394825 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
NR4A1-204ENST00000394825 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
NR4A1-204ENST00000394825 ARHGEF12Q9NZN5 1544 aa21.41■■□□□ 1.02
NR4A1-204ENST00000394825 CCDC7Q96M83 1385 aa21.41■■□□□ 1.02
NR4A1-204ENST00000394825 RIMBP3CA6NJZ7 1639 aa21.41■■□□□ 1.02
NR4A1-204ENST00000394825 RIMBP3BA6NNM3 1639 aa21.41■■□□□ 1.02
NR4A1-204ENST00000394825 RIMBP3Q9UFD9 1639 aa21.41■■□□□ 1.02
NR4A1-204ENST00000394825 KDM5DQ9BY66 1539 aa21.4■■□□□ 1.02
NR4A1-204ENST00000394825 FANCAO15360 1455 aa21.39■■□□□ 1.01
NR4A1-204ENST00000394825 PZPP20742 1482 aa21.38■■□□□ 1.01
NR4A1-204ENST00000394825 VSIG10Q8N0Z9 540 aa21.38■■□□□ 1.01
NR4A1-204ENST00000394825 CFAP74Q9C0B2 1584 aa21.37■■□□□ 1.01
NR4A1-204ENST00000394825 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
NR4A1-204ENST00000394825 RTEL1-TNFRSF6BF6WH68 1400 aa21.35■■□□□ 1.01
NR4A1-204ENST00000394825 DUOX2Q9NRD8 1548 aa21.35■■□□□ 1.01
NR4A1-204ENST00000394825 SLC4A1APQ9BWU0 796 aaKnown RBP21.33■■□□□ 1.01
NR4A1-204ENST00000394825 TRAPPC8Q9Y2L5 1435 aa21.32■■□□□ 1
NR4A1-204ENST00000394825 POLR1AO95602 1720 aaPredicted RBP21.31■■□□□ 1
NR4A1-204ENST00000394825 ANKRD30BQ9BXX2 1392 aa21.31■■□□□ 1
NR4A1-204ENST00000394825 UNC13BO14795 1591 aa21.31■■□□□ 1
NR4A1-204ENST00000394825 ERBINQ96RT1 1412 aa21.31■■□□□ 1
NR4A1-204ENST00000394825 ADGRL1O94910 1474 aa21.3■■□□□ 1
NR4A1-204ENST00000394825 ZFYVE16Q7Z3T8 1539 aa21.29■■□□□ 1
NR4A1-204ENST00000394825 CD109Q6YHK3 1445 aa21.28■■□□□ 1
NR4A1-204ENST00000394825 RRP9O43818 475 aaKnown RBP21.28■■□□□ 1
NR4A1-204ENST00000394825 RRP1P56182 461 aaKnown RBP21.28■■□□□ 1
NR4A1-204ENST00000394825 INO80Q9ULG1 1556 aaPredicted RBP21.28■■□□□ 1
NR4A1-204ENST00000394825 NUP155O75694 1391 aa21.28■■□□□ 1
NR4A1-204ENST00000394825 PODXL2Q9NZ53 605 aa21.27■■□□□ 1
NR4A1-204ENST00000394825 RPRD2Q5VT52 1461 aaKnown RBP21.27■□□□□ 0.99
NR4A1-204ENST00000394825 EXOC6Q8TAG9 804 aa21.26■□□□□ 0.99
NR4A1-204ENST00000394825 SPAG9O60271 1321 aaKnown RBP21.26■□□□□ 0.99
NR4A1-204ENST00000394825 RRAGDQ9NQL2 400 aaPredicted RBP21.25■□□□□ 0.99
NR4A1-204ENST00000394825 SCAPERQ9BY12 1400 aa21.25■□□□□ 0.99
NR4A1-204ENST00000394825 GLI2P10070 1586 aa21.24■□□□□ 0.99
NR4A1-204ENST00000394825 CYB5RLQ6IPT4 315 aa21.24■□□□□ 0.99
NR4A1-204ENST00000394825 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
NR4A1-204ENST00000394825 MAGI2Q86UL8 1455 aa21.23■□□□□ 0.99
NR4A1-204ENST00000394825 HSP90AA2PQ14568 343 aaPredicted RBP21.23■□□□□ 0.99
NR4A1-204ENST00000394825 DAXXQ9UER7 740 aaPredicted RBP21.22■□□□□ 0.99
NR4A1-204ENST00000394825 FAM135AQ9P2D6 1515 aa21.22■□□□□ 0.99
NR4A1-204ENST00000394825 IQGAP3Q86VI3 1631 aa21.22■□□□□ 0.99
NR4A1-204ENST00000394825 NEO1Q92859 1461 aa21.22■□□□□ 0.99
NR4A1-204ENST00000394825 ZNF518AQ6AHZ1 1483 aa21.21■□□□□ 0.99
NR4A1-204ENST00000394825 FRAT2O75474 233 aaPredicted RBP21.21■□□□□ 0.99
NR4A1-204ENST00000394825 MAP3K4Q9Y6R4 1608 aa21.21■□□□□ 0.99
NR4A1-204ENST00000394825 PKD2Q13563 968 aa21.2■□□□□ 0.98
NR4A1-204ENST00000394825 FOXD1Q16676 465 aa21.2■□□□□ 0.98
NR4A1-204ENST00000394825 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
NR4A1-204ENST00000394825 AFAP1Q8N556 730 aa21.19■□□□□ 0.98
NR4A1-204ENST00000394825 SLC4A3P48751 1232 aa21.17■□□□□ 0.98
NR4A1-204ENST00000394825 EIF2AK4Q9P2K8 1649 aaKnown RBP21.17■□□□□ 0.98
NR4A1-204ENST00000394825 DHX29Q7Z478 1369 aaKnown RBP21.17■□□□□ 0.98
NR4A1-204ENST00000394825 KDM5CP41229 1560 aa21.17■□□□□ 0.98
NR4A1-204ENST00000394825 SPATA31E1Q6ZUB1 1445 aa21.16■□□□□ 0.98
NR4A1-204ENST00000394825 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
NR4A1-204ENST00000394825 POGZQ7Z3K3 1410 aa21.15■□□□□ 0.98
NR4A1-204ENST00000394825 HSP90AA1P07900 732 aaKnown RBP21.15■□□□□ 0.98
NR4A1-204ENST00000394825 TEX14Q8IWB6 1497 aa21.15■□□□□ 0.98
NR4A1-204ENST00000394825 DEPDC5O75140 1603 aa21.15■□□□□ 0.98
NR4A1-204ENST00000394825 PNISRQ8TF01 805 aaKnown RBP21.15■□□□□ 0.98
NR4A1-204ENST00000394825 PLEKHG5O94827 1062 aa21.14■□□□□ 0.97
NR4A1-204ENST00000394825 L1TD1Q5T7N2 865 aaKnown RBP21.14■□□□□ 0.97
NR4A1-204ENST00000394825 KIDINS220Q9ULH0 1771 aa21.14■□□□□ 0.97
NR4A1-204ENST00000394825 RCAN3Q9UKA8 241 aa21.13■□□□□ 0.97
NR4A1-204ENST00000394825 DIP2BQ9P265 1576 aa21.12■□□□□ 0.97
NR4A1-204ENST00000394825 MLH3Q9UHC1 1453 aa21.11■□□□□ 0.97
NR4A1-204ENST00000394825 CLCN1P35523 988 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms