RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 DISP1Q96F81 1524 aa25.74■■□□□ 1.71
CXXC4-201ENST00000394767 AKNAQ7Z591 1439 aa25.73■■□□□ 1.71
CXXC4-201ENST00000394767 WDR7Q9Y4E6 1490 aa25.73■■□□□ 1.71
CXXC4-201ENST00000394767 CEP170Q5SW79 1584 aa25.72■■□□□ 1.71
CXXC4-201ENST00000394767 ABCC5O15440 1437 aa25.72■■□□□ 1.71
CXXC4-201ENST00000394767 NEUROD2Q15784 382 aa25.71■■□□□ 1.71
CXXC4-201ENST00000394767 TXNDC2Q86VQ3 553 aa25.7■■□□□ 1.7
CXXC4-201ENST00000394767 GPATCH8Q9UKJ3 1502 aaKnown RBP25.69■■□□□ 1.7
CXXC4-201ENST00000394767 TERF2IPQ9NYB0 399 aa25.69■■□□□ 1.7
CXXC4-201ENST00000394767 MINK1Q8N4C8 1332 aaPredicted RBP25.69■■□□□ 1.7
CXXC4-201ENST00000394767 DAXXQ9UER7 740 aaPredicted RBP25.68■■□□□ 1.7
CXXC4-201ENST00000394767 PTPN23Q9H3S7 1636 aa25.68■■□□□ 1.7
CXXC4-201ENST00000394767 MAPK8IP3Q9UPT6 1336 aa25.68■■□□□ 1.7
CXXC4-201ENST00000394767 ROCK1Q13464 1354 aa25.67■■□□□ 1.7
CXXC4-201ENST00000394767 PLCH2O75038 1416 aa25.67■■□□□ 1.7
CXXC4-201ENST00000394767 SLC52A1Q9NWF4 448 aa25.67■■□□□ 1.7
CXXC4-201ENST00000394767 ABCC2Q92887 1545 aa25.66■■□□□ 1.7
CXXC4-201ENST00000394767 STAC3Q96MF2 364 aa25.66■■□□□ 1.7
CXXC4-201ENST00000394767 MYT1Q01538 1121 aa25.66■■□□□ 1.7
CXXC4-201ENST00000394767 GTF3C3Q9Y5Q9 886 aa25.66■■□□□ 1.7
CXXC4-201ENST00000394767 THEMISQ8N1K5 641 aaPredicted RBP25.66■■□□□ 1.7
CXXC4-201ENST00000394767 NPM2Q86SE8 214 aaKnown RBP25.65■■□□□ 1.7
CXXC4-201ENST00000394767 NAIPQ13075 1403 aa25.64■■□□□ 1.69
CXXC4-201ENST00000394767 TMEM132EQ6IEE7 984 aa25.63■■□□□ 1.69
CXXC4-201ENST00000394767 KIAA1107Q9UPP5 1409 aa25.61■■□□□ 1.69
CXXC4-201ENST00000394767 TEX14Q8IWB6 1497 aa25.59■■□□□ 1.69
CXXC4-201ENST00000394767 EVC2Q86UK5 1308 aa25.59■■□□□ 1.69
CXXC4-201ENST00000394767 USP47Q96K76 1375 aa25.59■■□□□ 1.69
CXXC4-201ENST00000394767 CFAP70Q5T0N1 1121 aa25.58■■□□□ 1.69
CXXC4-201ENST00000394767 KTN1Q86UP2 1357 aaKnown RBP25.58■■□□□ 1.69
CXXC4-201ENST00000394767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.58■■□□□ 1.69
CXXC4-201ENST00000394767 NCOA1Q15788 1441 aa25.57■■□□□ 1.68
CXXC4-201ENST00000394767 LAS1LQ9Y4W2 734 aaKnown RBP25.55■■□□□ 1.68
CXXC4-201ENST00000394767 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.54■■□□□ 1.68
CXXC4-201ENST00000394767 CEBPAP49715 358 aaPredicted RBP25.54■■□□□ 1.68
CXXC4-201ENST00000394767 CSB-PGBD3P0DP91 1061 aa25.52■■□□□ 1.68
CXXC4-201ENST00000394767 CENPJQ9HC77 1338 aaPredicted RBP25.52■■□□□ 1.68
CXXC4-201ENST00000394767 DHX29Q7Z478 1369 aaKnown RBP25.5■■□□□ 1.67
CXXC4-201ENST00000394767 FBXO31Q5XUX0 539 aaPredicted RBP25.5■■□□□ 1.67
CXXC4-201ENST00000394767 PNNQ9H307 717 aaKnown RBP25.5■■□□□ 1.67
CXXC4-201ENST00000394767 ANKLE2Q86XL3 938 aa25.5■■□□□ 1.67
CXXC4-201ENST00000394767 PANK3Q9H999 370 aa25.48■■□□□ 1.67
CXXC4-201ENST00000394767 FKBP8Q14318 412 aa25.48■■□□□ 1.67
CXXC4-201ENST00000394767 SLC26A8Q96RN1 970 aa25.47■■□□□ 1.67
CXXC4-201ENST00000394767 ARXQ96QS3 562 aa25.46■■□□□ 1.67
CXXC4-201ENST00000394767 ATF3P18847 181 aa25.45■■□□□ 1.66
CXXC4-201ENST00000394767 RALBP1Q15311 655 aa25.45■■□□□ 1.66
CXXC4-201ENST00000394767 CHD1O14646 1710 aa25.44■■□□□ 1.66
CXXC4-201ENST00000394767 TRAPPC8Q9Y2L5 1435 aa25.44■■□□□ 1.66
CXXC4-201ENST00000394767 U2AF1L5P0DN76 240 aaPredicted RBP25.43■■□□□ 1.66
CXXC4-201ENST00000394767 U2AF1Q01081 240 aaKnown RBP eCLIP25.43■■□□□ 1.66
CXXC4-201ENST00000394767 SYCP2Q9BX26 1530 aa25.43■■□□□ 1.66
CXXC4-201ENST00000394767 NBPF1Q3BBV0 1214 aa25.43■■□□□ 1.66
CXXC4-201ENST00000394767 ERBINQ96RT1 1412 aa25.42■■□□□ 1.66
CXXC4-201ENST00000394767 PROSER2Q86WR7 435 aaPredicted RBP25.42■■□□□ 1.66
CXXC4-201ENST00000394767 ZNF518AQ6AHZ1 1483 aa25.42■■□□□ 1.66
CXXC4-201ENST00000394767 AMPHP49418 695 aa25.4■■□□□ 1.66
CXXC4-201ENST00000394767 CCDC9Q9Y3X0 531 aaKnown RBP25.4■■□□□ 1.66
CXXC4-201ENST00000394767 PPP6R1Q9UPN7 881 aa25.4■■□□□ 1.66
CXXC4-201ENST00000394767 SAMD9Q5K651 1589 aa25.39■■□□□ 1.66
CXXC4-201ENST00000394767 PSME1Q06323 249 aa25.39■■□□□ 1.65
CXXC4-201ENST00000394767 IDI1Q13907 227 aa25.38■■□□□ 1.65
CXXC4-201ENST00000394767 RPGRIP1LQ68CZ1 1315 aa25.37■■□□□ 1.65
CXXC4-201ENST00000394767 LTV1Q96GA3 475 aaPredicted RBP25.37■■□□□ 1.65
CXXC4-201ENST00000394767 PRAM1Q96QH2 718 aa25.36■■□□□ 1.65
CXXC4-201ENST00000394767 CABP2Q9NPB3 220 aa25.36■■□□□ 1.65
CXXC4-201ENST00000394767 ITSN2Q9NZM3 1697 aa25.35■■□□□ 1.65
CXXC4-201ENST00000394767 COG3Q96JB2 828 aa25.35■■□□□ 1.65
CXXC4-201ENST00000394767 CCER2I3L3R5 266 aa25.34■■□□□ 1.65
CXXC4-201ENST00000394767 CGNL1Q0VF96 1302 aa25.34■■□□□ 1.65
CXXC4-201ENST00000394767 A2MP01023 1474 aa25.34■■□□□ 1.65
CXXC4-201ENST00000394767 NBPF8Q3BBV2 869 aa25.34■■□□□ 1.65
CXXC4-201ENST00000394767 ANKRD30BQ9BXX2 1392 aa25.33■■□□□ 1.65
CXXC4-201ENST00000394767 RTF1Q92541 710 aaKnown RBP25.33■■□□□ 1.64
CXXC4-201ENST00000394767 IRX6P78412 446 aaPredicted RBP25.32■■□□□ 1.64
CXXC4-201ENST00000394767 ABCC10Q5T3U5 1492 aa25.32■■□□□ 1.64
CXXC4-201ENST00000394767 PTPRKQ15262 1439 aa25.31■■□□□ 1.64
CXXC4-201ENST00000394767 KDM5BQ9UGL1 1544 aa25.3■■□□□ 1.64
CXXC4-201ENST00000394767 NLRP13Q86W25 1043 aa25.29■■□□□ 1.64
CXXC4-201ENST00000394767 CCDC136Q96JN2 1154 aa25.26■■□□□ 1.63
CXXC4-201ENST00000394767 ESCO1Q5FWF5 840 aa25.23■■□□□ 1.63
CXXC4-201ENST00000394767 CFAP43Q8NDM7 1665 aa25.23■■□□□ 1.63
CXXC4-201ENST00000394767 DUOX2Q9NRD8 1548 aa25.22■■□□□ 1.63
CXXC4-201ENST00000394767 KIF7Q2M1P5 1343 aa25.22■■□□□ 1.63
CXXC4-201ENST00000394767 UHRF1BP1LA0JNW5 1464 aa25.21■■□□□ 1.63
CXXC4-201ENST00000394767 MYH16Q9H6N6 1097 aa25.21■■□□□ 1.63
CXXC4-201ENST00000394767 PMFBP1Q8TBY8 1022 aa25.2■■□□□ 1.62
CXXC4-201ENST00000394767 ERCC6L2Q5T890 1561 aa25.2■■□□□ 1.62
CXXC4-201ENST00000394767 ABCA8O94911 1581 aa25.19■■□□□ 1.62
CXXC4-201ENST00000394767 NUTM2GQ5VZR2 741 aa25.18■■□□□ 1.62
CXXC4-201ENST00000394767 FRAT1Q92837 279 aaPredicted RBP25.18■■□□□ 1.62
CXXC4-201ENST00000394767 FTSJ3Q8IY81 847 aaKnown RBP25.18■■□□□ 1.62
CXXC4-201ENST00000394767 TNRQ92752 1358 aa25.18■■□□□ 1.62
CXXC4-201ENST00000394767 EVA1CP58658 441 aa25.17■■□□□ 1.62
CXXC4-201ENST00000394767 TCOF1Q13428 1488 aaKnown RBP25.17■■□□□ 1.62
CXXC4-201ENST00000394767 DNAJC5Q9H3Z4 198 aa25.16■■□□□ 1.62
CXXC4-201ENST00000394767 CCDC7Q96M83 1385 aa25.16■■□□□ 1.62
CXXC4-201ENST00000394767 CDK19Q9BWU1 502 aa25.16■■□□□ 1.62
CXXC4-201ENST00000394767 CCDC146Q8IYE0 955 aa25.15■■□□□ 1.62
CXXC4-201ENST00000394767 GGNBP2Q9H3C7 697 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms