RNA–Protein interactions for RNA: ENST00000394672.7

CCDC66-203, Transcript of coiled-coil domain containing 66, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC66, Length 3,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-203ENST00000394672 NEURL4Q96JN8 1562 aa11.74□□□□□ -0.53
CCDC66-203ENST00000394672 YEATS2Q9ULM3 1422 aa11.73□□□□□ -0.53
CCDC66-203ENST00000394672 ZNF777Q9ULD5 760 aaPredicted RBP11.73□□□□□ -0.53
CCDC66-203ENST00000394672 CAMSAP1Q5T5Y3 1602 aa11.72□□□□□ -0.53
CCDC66-203ENST00000394672 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
CCDC66-203ENST00000394672 ADAMTSL3P82987 1691 aa11.72□□□□□ -0.53
CCDC66-203ENST00000394672 RAB3GAP2Q9H2M9 1393 aa11.71□□□□□ -0.54
CCDC66-203ENST00000394672 EFCAB6Q5THR3 1501 aa11.71□□□□□ -0.54
CCDC66-203ENST00000394672 PZPP20742 1482 aa11.71□□□□□ -0.54
CCDC66-203ENST00000394672 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.54
CCDC66-203ENST00000394672 AFAP1Q8N556 730 aa11.71□□□□□ -0.54
CCDC66-203ENST00000394672 CEP152O94986 1710 aa11.7□□□□□ -0.54
CCDC66-203ENST00000394672 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
CCDC66-203ENST00000394672 ABCC3O15438 1527 aa11.7□□□□□ -0.54
CCDC66-203ENST00000394672 KDM5AP29375 1690 aaKnown RBP11.69□□□□□ -0.54
CCDC66-203ENST00000394672 E9PCH4 1651 aa11.69□□□□□ -0.54
CCDC66-203ENST00000394672 SPHKAPQ2M3C7 1700 aa11.68□□□□□ -0.54
CCDC66-203ENST00000394672 FER1L4A9Z1Z3 1794 aa11.68□□□□□ -0.54
CCDC66-203ENST00000394672 TRHP20396 242 aaPredicted RBP11.67□□□□□ -0.54
CCDC66-203ENST00000394672 CLSPNQ9HAW4 1339 aa11.67□□□□□ -0.54
CCDC66-203ENST00000394672 CNTLNQ9NXG0 1405 aa11.66□□□□□ -0.54
CCDC66-203ENST00000394672 RAPGEF3O95398 923 aa11.66□□□□□ -0.54
CCDC66-203ENST00000394672 PIK3C2BO00750 1634 aa11.66□□□□□ -0.54
CCDC66-203ENST00000394672 CLTCQ00610 1675 aaKnown RBP11.65□□□□□ -0.55
CCDC66-203ENST00000394672 TRPM2O94759 1503 aa11.64□□□□□ -0.55
CCDC66-203ENST00000394672 SPATA31D1Q6ZQQ2 1576 aa11.64□□□□□ -0.55
CCDC66-203ENST00000394672 PREX1Q8TCU6 1659 aa11.64□□□□□ -0.55
CCDC66-203ENST00000394672 PTPRTO14522 1441 aa11.63□□□□□ -0.55
CCDC66-203ENST00000394672 DHX57Q6P158 1386 aaKnown RBP11.62□□□□□ -0.55
CCDC66-203ENST00000394672 C3P01024 1663 aa11.61□□□□□ -0.55
CCDC66-203ENST00000394672 KANK1Q14678 1352 aa11.61□□□□□ -0.55
CCDC66-203ENST00000394672 RRP7BPQ9NSQ0 103 aa11.61□□□□□ -0.55
CCDC66-203ENST00000394672 ZNF142P52746 1687 aaPredicted RBP11.6□□□□□ -0.55
CCDC66-203ENST00000394672 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
CCDC66-203ENST00000394672 NOS1P29475 1434 aa11.59□□□□□ -0.55
CCDC66-203ENST00000394672 PCGF6Q9BYE7 350 aa11.58□□□□□ -0.55
CCDC66-203ENST00000394672 IFT172Q9UG01 1749 aa11.58□□□□□ -0.56
CCDC66-203ENST00000394672 MADDQ8WXG6 1647 aa11.58□□□□□ -0.56
CCDC66-203ENST00000394672 NPATQ14207 1427 aa11.57□□□□□ -0.56
CCDC66-203ENST00000394672 SYNMO15061 1565 aa11.57□□□□□ -0.56
CCDC66-203ENST00000394672 KIF1BO60333 1816 aa11.55□□□□□ -0.56
CCDC66-203ENST00000394672 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
CCDC66-203ENST00000394672 ERVK-7P63135 1459 aa11.55□□□□□ -0.56
CCDC66-203ENST00000394672 NUP155O75694 1391 aa11.55□□□□□ -0.56
CCDC66-203ENST00000394672 CLTCL1P53675 1640 aa11.55□□□□□ -0.56
CCDC66-203ENST00000394672 ANKRD30BQ9BXX2 1392 aa11.54□□□□□ -0.56
CCDC66-203ENST00000394672 ITGAEP38570 1179 aa11.54□□□□□ -0.56
CCDC66-203ENST00000394672 PLA2R1Q13018 1463 aa11.54□□□□□ -0.56
CCDC66-203ENST00000394672 ADGRB3O60242 1522 aa11.54□□□□□ -0.56
CCDC66-203ENST00000394672 MYO3AQ8NEV4 1616 aa11.52□□□□□ -0.57
CCDC66-203ENST00000394672 KIF3BO15066 747 aa11.51□□□□□ -0.57
CCDC66-203ENST00000394672 MPHOSPH9Q99550 1183 aa11.51□□□□□ -0.57
CCDC66-203ENST00000394672 TMEM131LA2VDJ0 1609 aa11.51□□□□□ -0.57
CCDC66-203ENST00000394672 NLRP1Q9C000 1473 aa11.5□□□□□ -0.57
CCDC66-203ENST00000394672 PPLO60437 1756 aa11.5□□□□□ -0.57
CCDC66-203ENST00000394672 UBR1Q8IWV7 1749 aa11.5□□□□□ -0.57
CCDC66-203ENST00000394672 KIAA1210Q9ULL0 1709 aa11.5□□□□□ -0.57
CCDC66-203ENST00000394672 TIMELESSQ9UNS1 1208 aa11.49□□□□□ -0.57
CCDC66-203ENST00000394672 SPATA31E1Q6ZUB1 1445 aa11.47□□□□□ -0.57
CCDC66-203ENST00000394672 LAMC1P11047 1609 aa11.47□□□□□ -0.57
CCDC66-203ENST00000394672 MYOM2P54296 1465 aa11.46□□□□□ -0.57
CCDC66-203ENST00000394672 NRXN1Q9ULB1 1477 aa11.46□□□□□ -0.58
CCDC66-203ENST00000394672 ZMYM3Q14202 1370 aa11.46□□□□□ -0.58
CCDC66-203ENST00000394672 UGGT1Q9NYU2 1555 aa11.46□□□□□ -0.58
CCDC66-203ENST00000394672 PTPRMP28827 1452 aa11.44□□□□□ -0.58
CCDC66-203ENST00000394672 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
CCDC66-203ENST00000394672 MYO5BQ9ULV0 1848 aa11.44□□□□□ -0.58
CCDC66-203ENST00000394672 SLIT1O75093 1534 aa11.44□□□□□ -0.58
CCDC66-203ENST00000394672 SLC4A1APQ9BWU0 796 aaKnown RBP11.44□□□□□ -0.58
CCDC66-203ENST00000394672 WASHC2CQ9Y4E1 1318 aa11.44□□□□□ -0.58
CCDC66-203ENST00000394672 ZFYVE9O95405 1425 aa11.44□□□□□ -0.58
CCDC66-203ENST00000394672 A2ML1A8K2U0 1454 aa11.43□□□□□ -0.58
CCDC66-203ENST00000394672 STAC3Q96MF2 364 aa11.43□□□□□ -0.58
CCDC66-203ENST00000394672 UHRF1BP1Q6BDS2 1440 aa11.43□□□□□ -0.58
CCDC66-203ENST00000394672 SETD1BQ9UPS6 1966 aaKnown RBP11.43□□□□□ -0.58
CCDC66-203ENST00000394672 NEXMIFQ5QGS0 1516 aa11.43□□□□□ -0.58
CCDC66-203ENST00000394672 CEP170BQ9Y4F5 1589 aaPredicted RBP11.43□□□□□ -0.58
CCDC66-203ENST00000394672 PKD2Q13563 968 aa11.43□□□□□ -0.58
CCDC66-203ENST00000394672 CCDC144AA2RUR9 1427 aa11.42□□□□□ -0.58
CCDC66-203ENST00000394672 ARHGAP23Q9P227 1491 aa11.42□□□□□ -0.58
CCDC66-203ENST00000394672 TRIM52Q96A61 297 aa11.42□□□□□ -0.58
CCDC66-203ENST00000394672 SLC52A1Q9NWF4 448 aa11.41□□□□□ -0.58
CCDC66-203ENST00000394672 SETD1AO15047 1707 aaKnown RBP11.41□□□□□ -0.58
CCDC66-203ENST00000394672 POLR1AO95602 1720 aaPredicted RBP11.4□□□□□ -0.58
CCDC66-203ENST00000394672 TNRQ92752 1358 aa11.4□□□□□ -0.58
CCDC66-203ENST00000394672 DIP2AQ14689 1571 aa11.39□□□□□ -0.59
CCDC66-203ENST00000394672 GGT6Q6P531 493 aa11.39□□□□□ -0.59
CCDC66-203ENST00000394672 TRPM1Q7Z4N2 1603 aa11.39□□□□□ -0.59
CCDC66-203ENST00000394672 SETBP1Q9Y6X0 1596 aa11.39□□□□□ -0.59
CCDC66-203ENST00000394672 RPGRIP1LQ68CZ1 1315 aa11.39□□□□□ -0.59
CCDC66-203ENST00000394672 ZEB1P37275 1124 aaPredicted RBP11.37□□□□□ -0.59
CCDC66-203ENST00000394672 PRAG1Q86YV5 1406 aa11.37□□□□□ -0.59
CCDC66-203ENST00000394672 KNDC1Q76NI1 1749 aa11.36□□□□□ -0.59
CCDC66-203ENST00000394672 NRXN3Q9Y4C0 1643 aa11.36□□□□□ -0.59
CCDC66-203ENST00000394672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.598e-6■□□□□ 10.7
CCDC66-203ENST00000394672 ARID4BQ4LE39 1312 aaPredicted RBP11.35□□□□□ -0.59
CCDC66-203ENST00000394672 CFAP65Q6ZU64 1925 aaKnown RBP11.34□□□□□ -0.59
CCDC66-203ENST00000394672 MED14O60244 1454 aa11.34□□□□□ -0.59
CCDC66-203ENST00000394672 RALGAPBQ86X10 1494 aa11.33□□□□□ -0.6
CCDC66-203ENST00000394672 IQGAP1P46940 1657 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms