RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 L3MBTL2Q969R5 705 aa21.44■■□□□ 1.02
CCT4-201ENST00000394440 POGZQ7Z3K3 1410 aa21.43■■□□□ 1.02
CCT4-201ENST00000394440 FAM69CQ0P6D2 419 aa21.43■■□□□ 1.02
CCT4-201ENST00000394440 HECW2Q9P2P5 1572 aa21.38■■□□□ 1.01
CCT4-201ENST00000394440 MLH3Q9UHC1 1453 aa21.37■■□□□ 1.01
CCT4-201ENST00000394440 VWDEQ8N2E2 1590 aa21.37■■□□□ 1.01
CCT4-201ENST00000394440 MROH1Q8NDA8 1641 aa21.36■■□□□ 1.01
CCT4-201ENST00000394440 DHX29Q7Z478 1369 aaKnown RBP21.36■■□□□ 1.01
CCT4-201ENST00000394440 TSPOAP1O95153 1857 aa21.35■■□□□ 1.01
CCT4-201ENST00000394440 RICTORQ6R327 1708 aa21.35■■□□□ 1.01
CCT4-201ENST00000394440 PRDM15P57071 1507 aaPredicted RBP21.35■■□□□ 1.01
CCT4-201ENST00000394440 ATP10AO60312 1499 aa21.35■■□□□ 1.01
CCT4-201ENST00000394440 PLA2R1Q13018 1463 aa21.35■■□□□ 1.01
CCT4-201ENST00000394440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.016e-6■■□□□ 13.7
CCT4-201ENST00000394440 E9PCH4 1651 aa21.33■■□□□ 1.01
CCT4-201ENST00000394440 TET3O43151 1660 aa21.32■■□□□ 1
CCT4-201ENST00000394440 ABCA6Q8N139 1617 aa21.32■■□□□ 1
CCT4-201ENST00000394440 PPRC1Q5VV67 1664 aaKnown RBP21.32■■□□□ 1
CCT4-201ENST00000394440 BCORL1Q5H9F3 1711 aa21.31■■□□□ 1
CCT4-201ENST00000394440 FRMPD1Q5SYB0 1578 aa21.31■■□□□ 1
CCT4-201ENST00000394440 RNF17Q9BXT8 1623 aaKnown RBP21.31■■□□□ 1
CCT4-201ENST00000394440 A2MP01023 1474 aa21.3■■□□□ 1
CCT4-201ENST00000394440 NBPF8Q3BBV2 869 aa21.29■■□□□ 1
CCT4-201ENST00000394440 CCDC144AA2RUR9 1427 aa21.28■■□□□ 1
CCT4-201ENST00000394440 UHRF1BP1Q6BDS2 1440 aa21.27■■□□□ 1
CCT4-201ENST00000394440 SPHKAPQ2M3C7 1700 aa21.26■□□□□ 0.99
CCT4-201ENST00000394440 MYT1LQ9UL68 1186 aa21.25■□□□□ 0.99
CCT4-201ENST00000394440 DIP2CQ9Y2E4 1556 aa21.25■□□□□ 0.99
CCT4-201ENST00000394440 MIER1Q8N108 512 aa21.24■□□□□ 0.99
CCT4-201ENST00000394440 KIF3BO15066 747 aa21.23■□□□□ 0.99
CCT4-201ENST00000394440 TRPM2O94759 1503 aa21.23■□□□□ 0.99
CCT4-201ENST00000394440 HIRIP3Q9BW71 556 aaPredicted RBP21.22■□□□□ 0.99
CCT4-201ENST00000394440 LMTK2Q8IWU2 1503 aa21.22■□□□□ 0.99
CCT4-201ENST00000394440 KANK1Q14678 1352 aa21.22■□□□□ 0.99
CCT4-201ENST00000394440 ZMYM4Q5VZL5 1548 aa21.21■□□□□ 0.99
CCT4-201ENST00000394440 PTPRTO14522 1441 aa21.21■□□□□ 0.99
CCT4-201ENST00000394440 RAPGEF3O95398 923 aa21.21■□□□□ 0.99
CCT4-201ENST00000394440 AEBP2Q6ZN18 517 aaPredicted RBP21.21■□□□□ 0.99
CCT4-201ENST00000394440 CEP152O94986 1710 aa21.2■□□□□ 0.98
CCT4-201ENST00000394440 EFCAB6Q5THR3 1501 aa21.2■□□□□ 0.98
CCT4-201ENST00000394440 RALGAPBQ86X10 1494 aa21.19■□□□□ 0.98
CCT4-201ENST00000394440 HSPA5P11021 654 aaKnown RBP21.18■□□□□ 0.98
CCT4-201ENST00000394440 SPATA31E1Q6ZUB1 1445 aa21.18■□□□□ 0.98
CCT4-201ENST00000394440 EIF4G2P78344 907 aaKnown RBP eCLIP21.17■□□□□ 0.98
CCT4-201ENST00000394440 CLTCL1P53675 1640 aa21.16■□□□□ 0.98
CCT4-201ENST00000394440 POLR1AO95602 1720 aaPredicted RBP21.16■□□□□ 0.98
CCT4-201ENST00000394440 TRPM1Q7Z4N2 1603 aa21.13■□□□□ 0.97
CCT4-201ENST00000394440 YEATS2Q9ULM3 1422 aa21.13■□□□□ 0.97
CCT4-201ENST00000394440 NEURL4Q96JN8 1562 aa21.12■□□□□ 0.97
CCT4-201ENST00000394440 PRAG1Q86YV5 1406 aa21.11■□□□□ 0.97
CCT4-201ENST00000394440 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
CCT4-201ENST00000394440 DCAF11Q8TEB1 546 aa21.11■□□□□ 0.97
CCT4-201ENST00000394440 ABCC3O15438 1527 aa21.1■□□□□ 0.97
CCT4-201ENST00000394440 ZC3H13Q5T200 1668 aaKnown RBP21.08■□□□□ 0.96
CCT4-201ENST00000394440 ZNF326Q5BKZ1 582 aaKnown RBP21.08■□□□□ 0.96
CCT4-201ENST00000394440 CAMSAP1Q5T5Y3 1602 aa21.07■□□□□ 0.96
CCT4-201ENST00000394440 REREQ9P2R6 1566 aa21.07■□□□□ 0.96
CCT4-201ENST00000394440 WASHC2AQ641Q2 1341 aa21.06■□□□□ 0.96
CCT4-201ENST00000394440 LAMC1P11047 1609 aa21.06■□□□□ 0.96
CCT4-201ENST00000394440 USP47Q96K76 1375 aa21.06■□□□□ 0.96
CCT4-201ENST00000394440 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
CCT4-201ENST00000394440 KIF1BO60333 1816 aa21.05■□□□□ 0.96
CCT4-201ENST00000394440 NPATQ14207 1427 aa21.04■□□□□ 0.96
CCT4-201ENST00000394440 RGL3Q3MIN7 710 aa21.04■□□□□ 0.96
CCT4-201ENST00000394440 UGGT1Q9NYU2 1555 aa21.03■□□□□ 0.96
CCT4-201ENST00000394440 MADDQ8WXG6 1647 aa21.03■□□□□ 0.96
CCT4-201ENST00000394440 GGT6Q6P531 493 aa21.02■□□□□ 0.95
CCT4-201ENST00000394440 GPRASP1Q5JY77 1395 aa21.01■□□□□ 0.95
CCT4-201ENST00000394440 SIGLEC1Q9BZZ2 1709 aa21.01■□□□□ 0.95
CCT4-201ENST00000394440 CCDC7Q96M83 1385 aa21.01■□□□□ 0.95
CCT4-201ENST00000394440 IFT172Q9UG01 1749 aa21.01■□□□□ 0.95
CCT4-201ENST00000394440 COL17A1Q9UMD9 1497 aaPredicted RBP21■□□□□ 0.95
CCT4-201ENST00000394440 MROH2AA6NES4 1674 aa21■□□□□ 0.95
CCT4-201ENST00000394440 C11orf95C9JLR9 678 aaPredicted RBP21■□□□□ 0.95
CCT4-201ENST00000394440 CFAP65Q6ZU64 1925 aaKnown RBP21■□□□□ 0.95
CCT4-201ENST00000394440 AGLP35573 1532 aa20.99■□□□□ 0.95
CCT4-201ENST00000394440 CNTLNQ9NXG0 1405 aa20.98■□□□□ 0.95
CCT4-201ENST00000394440 CARD11Q9BXL7 1154 aa20.98■□□□□ 0.95
CCT4-201ENST00000394440 ARHGAP31Q2M1Z3 1444 aa20.98■□□□□ 0.95
CCT4-201ENST00000394440 ROCK2O75116 1388 aaKnown RBP20.98■□□□□ 0.95
CCT4-201ENST00000394440 ARHGEF40Q8TER5 1519 aa20.97■□□□□ 0.95
CCT4-201ENST00000394440 ADGRB3O60242 1522 aa20.97■□□□□ 0.95
CCT4-201ENST00000394440 WASHC2CQ9Y4E1 1318 aa20.96■□□□□ 0.95
CCT4-201ENST00000394440 NOS1P29475 1434 aa20.96■□□□□ 0.95
CCT4-201ENST00000394440 STAC3Q96MF2 364 aa20.96■□□□□ 0.95
CCT4-201ENST00000394440 PIK3C2BO00750 1634 aa20.95■□□□□ 0.95
CCT4-201ENST00000394440 KIF7Q2M1P5 1343 aa20.94■□□□□ 0.94
CCT4-201ENST00000394440 KIAA1210Q9ULL0 1709 aa20.93■□□□□ 0.94
CCT4-201ENST00000394440 SYNMO15061 1565 aa20.93■□□□□ 0.94
CCT4-201ENST00000394440 MYOM2P54296 1465 aa20.93■□□□□ 0.94
CCT4-201ENST00000394440 NBPF1Q3BBV0 1214 aa20.91■□□□□ 0.94
CCT4-201ENST00000394440 IQGAP1P46940 1657 aa20.89■□□□□ 0.94
CCT4-201ENST00000394440 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.94
CCT4-201ENST00000394440 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.94
CCT4-201ENST00000394440 PPLO60437 1756 aa20.89■□□□□ 0.93
CCT4-201ENST00000394440 NRXN1Q9ULB1 1477 aa20.87■□□□□ 0.93
CCT4-201ENST00000394440 KDM4FA0A1W2PPD8 638 aa20.87■□□□□ 0.93
CCT4-201ENST00000394440 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
CCT4-201ENST00000394440 ANP32CO43423 234 aa20.86■□□□□ 0.93
CCT4-201ENST00000394440 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms