RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 USP47Q96K76 1375 aa11.64□□□□□ -0.55
CDH11-202ENST00000394156 FOXD4L6Q3SYB3 417 aaPredicted RBP11.64□□□□□ -0.55
CDH11-202ENST00000394156 FOXD4L3Q6VB84 417 aaPredicted RBP11.64□□□□□ -0.55
CDH11-202ENST00000394156 EID1Q9Y6B2 187 aa11.64□□□□□ -0.55
CDH11-202ENST00000394156 HDGFP51858 240 aaKnown RBP11.63□□□□□ -0.55
CDH11-202ENST00000394156 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
CDH11-202ENST00000394156 EIF2S2P20042 333 aaKnown RBP11.62□□□□□ -0.55
CDH11-202ENST00000394156 CCER2I3L3R5 266 aa11.62□□□□□ -0.55
CDH11-202ENST00000394156 CDK13Q14004 1512 aaKnown RBP11.62□□□□□ -0.55
CDH11-202ENST00000394156 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
CDH11-202ENST00000394156 EXOC6Q8TAG9 804 aa11.62□□□□□ -0.55
CDH11-202ENST00000394156 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
CDH11-202ENST00000394156 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
CDH11-202ENST00000394156 SYTL4Q96C24 671 aaPredicted RBP11.61□□□□□ -0.55
CDH11-202ENST00000394156 NBPF1Q3BBV0 1214 aa11.61□□□□□ -0.55
CDH11-202ENST00000394156 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
CDH11-202ENST00000394156 APAF1O14727 1248 aa11.6□□□□□ -0.55
CDH11-202ENST00000394156 CRBNQ96SW2 442 aa11.6□□□□□ -0.55
CDH11-202ENST00000394156 ARID3AQ99856 593 aa11.6□□□□□ -0.55
CDH11-202ENST00000394156 GGNBP2Q9H3C7 697 aa11.6□□□□□ -0.55
CDH11-202ENST00000394156 SNAPC4Q5SXM2 1469 aa11.6□□□□□ -0.55
CDH11-202ENST00000394156 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
CDH11-202ENST00000394156 RAPGEF3O95398 923 aa11.59□□□□□ -0.55
CDH11-202ENST00000394156 PTMAP06454 111 aaKnown RBP11.59□□□□□ -0.55
CDH11-202ENST00000394156 USP35Q9P2H5 1018 aa11.59□□□□□ -0.55
CDH11-202ENST00000394156 NCOA2Q15596 1464 aa11.59□□□□□ -0.55
CDH11-202ENST00000394156 PRG4Q92954 1404 aaPredicted RBP11.59□□□□□ -0.55
CDH11-202ENST00000394156 PMFBP1Q8TBY8 1022 aa11.59□□□□□ -0.55
CDH11-202ENST00000394156 FGD6Q6ZV73 1430 aa11.59□□□□□ -0.55
CDH11-202ENST00000394156 PNNQ9H307 717 aaKnown RBP11.58□□□□□ -0.56
CDH11-202ENST00000394156 TRIM44Q96DX7 344 aaPredicted RBP11.58□□□□□ -0.56
CDH11-202ENST00000394156 RALBP1Q15311 655 aa11.58□□□□□ -0.56
CDH11-202ENST00000394156 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
CDH11-202ENST00000394156 KIF15Q9NS87 1388 aa11.58□□□□□ -0.56
CDH11-202ENST00000394156 COG6Q9Y2V7 657 aa11.57□□□□□ -0.56
CDH11-202ENST00000394156 TERF2IPQ9NYB0 399 aa11.57□□□□□ -0.56
CDH11-202ENST00000394156 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
CDH11-202ENST00000394156 XPCQ01831 940 aaPredicted RBP11.56□□□□□ -0.56
CDH11-202ENST00000394156 EIF3AQ14152 1382 aaKnown RBP11.56□□□□□ -0.56
CDH11-202ENST00000394156 EVA1CP58658 441 aa11.56□□□□□ -0.56
CDH11-202ENST00000394156 CFAP70Q5T0N1 1121 aa11.56□□□□□ -0.56
CDH11-202ENST00000394156 CCDC184Q52MB2 194 aa11.56□□□□□ -0.56
CDH11-202ENST00000394156 PRKRIP1Q9H875 184 aaPredicted RBP11.55□□□□□ -0.56
CDH11-202ENST00000394156 HSCBQ8IWL3 235 aa11.55□□□□□ -0.56
CDH11-202ENST00000394156 CDCA7LQ96GN5 454 aa11.54□□□□□ -0.56
CDH11-202ENST00000394156 TOPBP1Q92547 1522 aa11.54□□□□□ -0.56
CDH11-202ENST00000394156 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
CDH11-202ENST00000394156 CENPJQ9HC77 1338 aaPredicted RBP11.54□□□□□ -0.56
CDH11-202ENST00000394156 PSME1Q06323 249 aa11.54□□□□□ -0.56
CDH11-202ENST00000394156 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
CDH11-202ENST00000394156 POLA1P09884 1462 aaPredicted RBP11.53□□□□□ -0.56
CDH11-202ENST00000394156 ERICH6BQ5W0A0 696 aa11.53□□□□□ -0.56
CDH11-202ENST00000394156 MYBBP1AQ9BQG0 1328 aaKnown RBP11.53□□□□□ -0.56
CDH11-202ENST00000394156 GOLGA6L22H0YM25 854 aa11.53□□□□□ -0.56
CDH11-202ENST00000394156 MSH5O43196 834 aa11.53□□□□□ -0.56
CDH11-202ENST00000394156 RILPL2Q969X0 211 aa11.53□□□□□ -0.56
CDH11-202ENST00000394156 COG3Q96JB2 828 aa11.53□□□□□ -0.56
CDH11-202ENST00000394156 TXNDC2Q86VQ3 553 aa11.53□□□□□ -0.56
CDH11-202ENST00000394156 TOP2BQ02880 1626 aa11.53□□□□□ -0.56
CDH11-202ENST00000394156 MYOM3Q5VTT5 1437 aa11.52□□□□□ -0.56
CDH11-202ENST00000394156 TAF7LQ5H9L4 462 aa11.52□□□□□ -0.57
CDH11-202ENST00000394156 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.57
CDH11-202ENST00000394156 ANKRD45Q5TZF3 282 aa11.52□□□□□ -0.57
CDH11-202ENST00000394156 NLRP13Q86W25 1043 aa11.52□□□□□ -0.57
CDH11-202ENST00000394156 KDM4AO75164 1064 aa11.51□□□□□ -0.57
CDH11-202ENST00000394156 NBPF8Q3BBV2 869 aa11.51□□□□□ -0.57
CDH11-202ENST00000394156 BICRAQ9NZM4 1560 aa11.51□□□□□ -0.57
CDH11-202ENST00000394156 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
CDH11-202ENST00000394156 CLSTN1O94985 981 aa11.51□□□□□ -0.57
CDH11-202ENST00000394156 RIPK4P57078 832 aa11.5□□□□□ -0.57
CDH11-202ENST00000394156 AIMP1Q12904 312 aaKnown RBP11.5□□□□□ -0.57
CDH11-202ENST00000394156 ZRSR1Q15695 479 aaKnown RBP11.5□□□□□ -0.57
CDH11-202ENST00000394156 WDR97A6NE52 1622 aa11.5□□□□□ -0.57
CDH11-202ENST00000394156 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
CDH11-202ENST00000394156 STK31Q9BXU1 1019 aa11.5□□□□□ -0.57
CDH11-202ENST00000394156 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
CDH11-202ENST00000394156 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
CDH11-202ENST00000394156 GORABQ5T7V8 394 aa11.5□□□□□ -0.57
CDH11-202ENST00000394156 PANK1Q8TE04 598 aa11.5□□□□□ -0.57
CDH11-202ENST00000394156 EVC2Q86UK5 1308 aa11.49□□□□□ -0.57
CDH11-202ENST00000394156 NAP1L5Q96NT1 182 aaPredicted RBP11.49□□□□□ -0.57
CDH11-202ENST00000394156 TIMELESSQ9UNS1 1208 aa11.49□□□□□ -0.57
CDH11-202ENST00000394156 FOSBP53539 338 aa11.49□□□□□ -0.57
CDH11-202ENST00000394156 C1orf115Q9H7X2 142 aa11.48□□□□□ -0.57
CDH11-202ENST00000394156 GRIN2BQ13224 1484 aa11.48□□□□□ -0.57
CDH11-202ENST00000394156 SKAP1Q86WV1 359 aa11.48□□□□□ -0.57
CDH11-202ENST00000394156 SCAPERQ9BY12 1400 aa11.48□□□□□ -0.57
CDH11-202ENST00000394156 MRC2Q9UBG0 1479 aa11.48□□□□□ -0.57
CDH11-202ENST00000394156 IPO8O15397 1037 aaKnown RBP11.48□□□□□ -0.57
CDH11-202ENST00000394156 PRAM1Q96QH2 718 aa11.48□□□□□ -0.57
CDH11-202ENST00000394156 HSP90B1P14625 803 aaKnown RBP11.47□□□□□ -0.57
CDH11-202ENST00000394156 SLC26A8Q96RN1 970 aa11.47□□□□□ -0.57
CDH11-202ENST00000394156 ANKRD50Q9ULJ7 1429 aa11.47□□□□□ -0.57
CDH11-202ENST00000394156 ARHGEF11O15085 1522 aa11.47□□□□□ -0.57
CDH11-202ENST00000394156 VGFO15240 615 aaPredicted RBP11.47□□□□□ -0.57
CDH11-202ENST00000394156 ADAMTS8Q9UP79 889 aa11.47□□□□□ -0.57
CDH11-202ENST00000394156 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
CDH11-202ENST00000394156 SLC12A5Q9H2X9 1139 aa11.46□□□□□ -0.57
CDH11-202ENST00000394156 KLHL34Q8N239 644 aa11.46□□□□□ -0.58
CDH11-202ENST00000394156 RWDD1Q9H446 243 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms