RNA–Protein interactions for RNA: ENST00000393417.7

MDM2-213, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-213ENST00000393417 NEURL4Q96JN8 1562 aa12.13□□□□□ -0.47
MDM2-213ENST00000393417 PLA2R1Q13018 1463 aa12.13□□□□□ -0.47
MDM2-213ENST00000393417 DHX29Q7Z478 1369 aaKnown RBP12.13□□□□□ -0.47
MDM2-213ENST00000393417 A2ML1A8K2U0 1454 aa12.12□□□□□ -0.47
MDM2-213ENST00000393417 LRRC9Q6ZRR7 1453 aa12.12□□□□□ -0.47
MDM2-213ENST00000393417 KIF3BO15066 747 aa12.12□□□□□ -0.47
MDM2-213ENST00000393417 FBXO31Q5XUX0 539 aaPredicted RBP12.11□□□□□ -0.47
MDM2-213ENST00000393417 CROCC2H7BZ55 1655 aa12.11□□□□□ -0.47
MDM2-213ENST00000393417 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
MDM2-213ENST00000393417 RNF17Q9BXT8 1623 aaKnown RBP12.11□□□□□ -0.47
MDM2-213ENST00000393417 DISP3Q9P2K9 1392 aa12.11□□□□□ -0.47
MDM2-213ENST00000393417 PZPP20742 1482 aa12.1□□□□□ -0.47
MDM2-213ENST00000393417 MROH1Q8NDA8 1641 aa12.09□□□□□ -0.47
MDM2-213ENST00000393417 IQSEC2Q5JU85 1478 aa12.09□□□□□ -0.47
MDM2-213ENST00000393417 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
MDM2-213ENST00000393417 MAST1Q9Y2H9 1570 aa12.08□□□□□ -0.48
MDM2-213ENST00000393417 ILDR2Q71H61 639 aa12.08□□□□□ -0.48
MDM2-213ENST00000393417 TNRQ92752 1358 aa12.08□□□□□ -0.48
MDM2-213ENST00000393417 EIF2AK4Q9P2K8 1649 aaKnown RBP12.08□□□□□ -0.48
MDM2-213ENST00000393417 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
MDM2-213ENST00000393417 STRCP1A6NGW2 1772 aa12.07□□□□□ -0.48
MDM2-213ENST00000393417 ABCC3O15438 1527 aa12.07□□□□□ -0.48
MDM2-213ENST00000393417 FAM135AQ9P2D6 1515 aa12.06□□□□□ -0.48
MDM2-213ENST00000393417 IQGAP1P46940 1657 aa12.06□□□□□ -0.48
MDM2-213ENST00000393417 PKD2Q13563 968 aa12.06□□□□□ -0.48
MDM2-213ENST00000393417 PPP6R1Q9UPN7 881 aa12.06□□□□□ -0.48
MDM2-213ENST00000393417 WASHC2CQ9Y4E1 1318 aa12.06□□□□□ -0.48
MDM2-213ENST00000393417 UGGT1Q9NYU2 1555 aa12.05□□□□□ -0.48
MDM2-213ENST00000393417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.487e-15■■□□□ 12.9
MDM2-213ENST00000393417 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
MDM2-213ENST00000393417 PTPN23Q9H3S7 1636 aa12.04□□□□□ -0.48
MDM2-213ENST00000393417 UBR1Q8IWV7 1749 aa12.04□□□□□ -0.48
MDM2-213ENST00000393417 MYOM3Q5VTT5 1437 aa12.03□□□□□ -0.48
MDM2-213ENST00000393417 VWDEQ8N2E2 1590 aa12.03□□□□□ -0.48
MDM2-213ENST00000393417 DEPDC5O75140 1603 aa12.03□□□□□ -0.48
MDM2-213ENST00000393417 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
MDM2-213ENST00000393417 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
MDM2-213ENST00000393417 MIA2Q96PC5 1412 aa12.01□□□□□ -0.49
MDM2-213ENST00000393417 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
MDM2-213ENST00000393417 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
MDM2-213ENST00000393417 NLRP1Q9C000 1473 aa12.01□□□□□ -0.49
MDM2-213ENST00000393417 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
MDM2-213ENST00000393417 RSPH4AQ5TD94 716 aa12□□□□□ -0.49
MDM2-213ENST00000393417 SHANK2Q9UPX8 1470 aa12□□□□□ -0.49
MDM2-213ENST00000393417 ALKQ9UM73 1620 aa11.99□□□□□ -0.49
MDM2-213ENST00000393417 CPS1P31327 1500 aa11.99□□□□□ -0.49
MDM2-213ENST00000393417 PRDM15P57071 1507 aaPredicted RBP11.99□□□□□ -0.49
MDM2-213ENST00000393417 DUOX2Q9NRD8 1548 aa11.99□□□□□ -0.49
MDM2-213ENST00000393417 NPHP4O75161 1426 aaPredicted RBP11.99□□□□□ -0.49
MDM2-213ENST00000393417 XIRP1Q702N8 1843 aaKnown RBP11.98□□□□□ -0.49
MDM2-213ENST00000393417 PIP4K2BP78356 416 aa11.98□□□□□ -0.49
MDM2-213ENST00000393417 PIK3C2BO00750 1634 aa11.98□□□□□ -0.49
MDM2-213ENST00000393417 KIF15Q9NS87 1388 aa11.96□□□□□ -0.49
MDM2-213ENST00000393417 MED14O60244 1454 aa11.96□□□□□ -0.49
MDM2-213ENST00000393417 ABCC5O15440 1437 aa11.96□□□□□ -0.49
MDM2-213ENST00000393417 ANKLE2Q86XL3 938 aa11.96□□□□□ -0.5
MDM2-213ENST00000393417 MYO5BQ9ULV0 1848 aa11.95□□□□□ -0.5
MDM2-213ENST00000393417 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
MDM2-213ENST00000393417 SYNMO15061 1565 aa11.95□□□□□ -0.5
MDM2-213ENST00000393417 DAPK1P53355 1430 aa11.95□□□□□ -0.5
MDM2-213ENST00000393417 THEMISQ8N1K5 641 aaPredicted RBP11.94□□□□□ -0.5
MDM2-213ENST00000393417 RRP7BPQ9NSQ0 103 aa11.94□□□□□ -0.5
MDM2-213ENST00000393417 HSPA1LP34931 641 aa11.94□□□□□ -0.5
MDM2-213ENST00000393417 FGD6Q6ZV73 1430 aa11.93□□□□□ -0.5
MDM2-213ENST00000393417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.93□□□□□ -0.51e-8■■□□□ 11.6
MDM2-213ENST00000393417 ERBINQ96RT1 1412 aa11.93□□□□□ -0.5
MDM2-213ENST00000393417 SOCS7O14512 581 aa11.92□□□□□ -0.5
MDM2-213ENST00000393417 CHIC2Q9UKJ5 165 aa11.92□□□□□ -0.5
MDM2-213ENST00000393417 SCAF11Q99590 1463 aaKnown RBP11.92□□□□□ -0.5
MDM2-213ENST00000393417 LRRC7Q96NW7 1537 aa11.91□□□□□ -0.5
MDM2-213ENST00000393417 SLIT1O75093 1534 aa11.89□□□□□ -0.51
MDM2-213ENST00000393417 TOM1O60784 492 aa11.89□□□□□ -0.51
MDM2-213ENST00000393417 APLP2Q06481 763 aa11.89□□□□□ -0.51
MDM2-213ENST00000393417 ARHGAP23Q9P227 1491 aa11.89□□□□□ -0.51
MDM2-213ENST00000393417 GCC2Q8IWJ2 1684 aa11.89□□□□□ -0.51
MDM2-213ENST00000393417 LTKP29376 864 aa11.88□□□□□ -0.51
MDM2-213ENST00000393417 EFCAB6Q5THR3 1501 aa11.88□□□□□ -0.51
MDM2-213ENST00000393417 ARHGAP31Q2M1Z3 1444 aa11.88□□□□□ -0.51
MDM2-213ENST00000393417 KDM5AP29375 1690 aaKnown RBP11.87□□□□□ -0.51
MDM2-213ENST00000393417 FOXD1Q16676 465 aa11.87□□□□□ -0.51
MDM2-213ENST00000393417 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
MDM2-213ENST00000393417 LMTK2Q8IWU2 1503 aa11.86□□□□□ -0.51
MDM2-213ENST00000393417 TXNDC2Q86VQ3 553 aa11.85□□□□□ -0.51
MDM2-213ENST00000393417 KANK1Q14678 1352 aa11.85□□□□□ -0.51
MDM2-213ENST00000393417 ANKRD30AQ9BXX3 1397 aa11.85□□□□□ -0.51
MDM2-213ENST00000393417 TET3O43151 1660 aa11.83□□□□□ -0.52
MDM2-213ENST00000393417 ADGRL2O95490 1459 aa11.83□□□□□ -0.52
MDM2-213ENST00000393417 TMEM2Q9UHN6 1383 aa11.83□□□□□ -0.52
MDM2-213ENST00000393417 FAM50AQ14320 339 aaKnown RBP11.83□□□□□ -0.52
MDM2-213ENST00000393417 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
MDM2-213ENST00000393417 E9PCH4 1651 aa11.82□□□□□ -0.52
MDM2-213ENST00000393417 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
MDM2-213ENST00000393417 RBM33Q96EV2 1170 aaKnown RBP11.81□□□□□ -0.52
MDM2-213ENST00000393417 UNC13BO14795 1591 aa11.81□□□□□ -0.52
MDM2-213ENST00000393417 IDI1Q13907 227 aa11.81□□□□□ -0.52
MDM2-213ENST00000393417 EID1Q9Y6B2 187 aa11.81□□□□□ -0.52
MDM2-213ENST00000393417 NOS1P29475 1434 aa11.8□□□□□ -0.52
MDM2-213ENST00000393417 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
MDM2-213ENST00000393417 TMEM131LA2VDJ0 1609 aa11.8□□□□□ -0.52
MDM2-213ENST00000393417 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms