RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 RBM33Q96EV2 1170 aaKnown RBP8.37□□□□□ -1.07
MDM2-208ENST00000393410 SLC24A1O60721 1099 aa8.36□□□□□ -1.07
MDM2-208ENST00000393410 PTPREP23469 700 aa8.36□□□□□ -1.07
MDM2-208ENST00000393410 LSM11P83369 360 aaKnown RBP eCLIP8.36□□□□□ -1.07
MDM2-208ENST00000393410 EN1Q05925 392 aaPredicted RBP8.36□□□□□ -1.07
MDM2-208ENST00000393410 COL9A1P20849 921 aa8.35□□□□□ -1.07
MDM2-208ENST00000393410 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
MDM2-208ENST00000393410 ANKRD13DQ6ZTN6 518 aa8.35□□□□□ -1.07
MDM2-208ENST00000393410 TESPA1A2RU30 521 aaPredicted RBP8.34□□□□□ -1.07
MDM2-208ENST00000393410 TSR1Q2NL82 804 aaKnown RBP8.34□□□□□ -1.07
MDM2-208ENST00000393410 SPNS2Q8IVW8 549 aa8.34□□□□□ -1.07
MDM2-208ENST00000393410 MAP3K7O43318 606 aa8.32□□□□□ -1.08
MDM2-208ENST00000393410 ADGRD1Q6QNK2 874 aa8.31□□□□□ -1.08
MDM2-208ENST00000393410 ZBED2Q9BTP6 218 aa8.31□□□□□ -1.08
MDM2-208ENST00000393410 CDHR5Q9HBB8 845 aa8.31□□□□□ -1.08
MDM2-208ENST00000393410 PPP1R3GB7ZBB8 358 aa8.3□□□□□ -1.08
MDM2-208ENST00000393410 KCNH8Q96L42 1107 aa8.3□□□□□ -1.08
MDM2-208ENST00000393410 TK2O00142 265 aa8.29□□□□□ -1.08
MDM2-208ENST00000393410 VPS9D1Q9Y2B5 631 aa8.29□□□□□ -1.08
MDM2-208ENST00000393410 HRO43593 1189 aa8.28□□□□□ -1.08
MDM2-208ENST00000393410 PROX2Q3B8N5 592 aa8.28□□□□□ -1.08
MDM2-208ENST00000393410 SLC4A5Q9BY07 1137 aa8.28□□□□□ -1.08
MDM2-208ENST00000393410 RBM26Q5T8P6 1007 aaKnown RBP8.27□□□□□ -1.09
MDM2-208ENST00000393410 NPDC1Q9NQX5 325 aaPredicted RBP8.27□□□□□ -1.09
MDM2-208ENST00000393410 MMRN1Q13201 1228 aa8.25□□□□□ -1.09
MDM2-208ENST00000393410 BHMG1C9JSJ3 638 aaPredicted RBP8.24□□□□□ -1.09
MDM2-208ENST00000393410 FAM198AQ9UFP1 575 aa8.24□□□□□ -1.09
MDM2-208ENST00000393410 SMYD5Q6GMV2 418 aa8.23□□□□□ -1.09
MDM2-208ENST00000393410 TSKSQ9UJT2 592 aa8.23□□□□□ -1.09
MDM2-208ENST00000393410 NUTM2FA1L443 756 aa8.22□□□□□ -1.09
MDM2-208ENST00000393410 TRIM6-TRIM34B2RNG4 842 aa8.22□□□□□ -1.09
MDM2-208ENST00000393410 CDCA7LQ96GN5 454 aa8.22□□□□□ -1.09
MDM2-208ENST00000393410 PRSS12P56730 875 aa8.21□□□□□ -1.1
MDM2-208ENST00000393410 PTGDRQ13258 359 aa8.21□□□□□ -1.1
MDM2-208ENST00000393410 CERKQ8TCT0 537 aa8.21□□□□□ -1.1
MDM2-208ENST00000393410 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
MDM2-208ENST00000393410 RABGEF1Q9UJ41 708 aa8.21□□□□□ -1.1
MDM2-208ENST00000393410 C3orf80F5H4A9 247 aa8.2□□□□□ -1.1
MDM2-208ENST00000393410 MYT1LQ9UL68 1186 aa8.2□□□□□ -1.1
MDM2-208ENST00000393410 GPR37O15354 613 aa8.19□□□□□ -1.1
MDM2-208ENST00000393410 ONECUT3O60422 494 aaPredicted RBP8.19□□□□□ -1.1
MDM2-208ENST00000393410 TTC13Q8NBP0 860 aa8.19□□□□□ -1.1
MDM2-208ENST00000393410 PADI6Q6TGC4 694 aa8.18□□□□□ -1.1
MDM2-208ENST00000393410 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.17□□□□□ -1.1
MDM2-208ENST00000393410 SEPT9Q9UHD8 586 aaPredicted RBP8.17□□□□□ -1.1
MDM2-208ENST00000393410 MRPL50Q8N5N7 158 aaKnown RBP8.16□□□□□ -1.1
MDM2-208ENST00000393410 RNF166Q96A37 237 aaPredicted RBP8.16□□□□□ -1.1
MDM2-208ENST00000393410 NBPF3Q9H094 633 aa8.16□□□□□ -1.1
MDM2-208ENST00000393410 RBM27Q9P2N5 1060 aaKnown RBP8.16□□□□□ -1.1
MDM2-208ENST00000393410 SMAPO00193 183 aa8.15□□□□□ -1.1
MDM2-208ENST00000393410 FCHSD2O94868 740 aa8.15□□□□□ -1.1
MDM2-208ENST00000393410 STAC3Q96MF2 364 aa8.15□□□□□ -1.1
MDM2-208ENST00000393410 FECHP22830 423 aa8.14□□□□□ -1.11
MDM2-208ENST00000393410 PACS2Q86VP3 889 aa8.14□□□□□ -1.11
MDM2-208ENST00000393410 GPIHBP1Q8IV16 184 aa8.14□□□□□ -1.11
MDM2-208ENST00000393410 LMOD2Q6P5Q4 547 aa8.13□□□□□ -1.11
MDM2-208ENST00000393410 TATDN2Q93075 761 aa8.13□□□□□ -1.11
MDM2-208ENST00000393410 PNMA3Q9UL41 463 aa8.13□□□□□ -1.11
MDM2-208ENST00000393410 TULP1O00294 542 aaPredicted RBP8.12□□□□□ -1.11
MDM2-208ENST00000393410 HIC1Q14526 733 aa8.12□□□□□ -1.11
MDM2-208ENST00000393410 FAM161AQ3B820 660 aa8.12□□□□□ -1.11
MDM2-208ENST00000393410 NUDT18Q6ZVK8 323 aa8.12□□□□□ -1.11
MDM2-208ENST00000393410 KCTD12Q96CX2 325 aaKnown RBP8.12□□□□□ -1.11
MDM2-208ENST00000393410 GNPATO15228 680 aa8.11□□□□□ -1.11
MDM2-208ENST00000393410 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
MDM2-208ENST00000393410 LAPTM4BQ86VI4 370 aa8.11□□□□□ -1.11
MDM2-208ENST00000393410 NBPF26B4DH59 902 aa8.1□□□□□ -1.11
MDM2-208ENST00000393410 ZFRQ96KR1 1074 aaKnown RBP8.1□□□□□ -1.11
MDM2-208ENST00000393410 ADGRG1Q9Y653 693 aa8.1□□□□□ -1.11
MDM2-208ENST00000393410 GOLGA8CPA6NN73 597 aa8.09□□□□□ -1.11
MDM2-208ENST00000393410 WNT2BQ93097 391 aa8.09□□□□□ -1.11
MDM2-208ENST00000393410 EYA1Q99502 592 aa8.09□□□□□ -1.11
MDM2-208ENST00000393410 BCANQ96GW7 911 aa8.08□□□□□ -1.12
MDM2-208ENST00000393410 THSD4Q6ZMP0 1018 aa8.07□□□□□ -1.12
MDM2-208ENST00000393410 BCAMP50895 628 aa8.06□□□□□ -1.12
MDM2-208ENST00000393410 ANKK1Q8NFD2 765 aa8.06□□□□□ -1.12
MDM2-208ENST00000393410 SAMD7Q7Z3H4 446 aa8.05□□□□□ -1.12
MDM2-208ENST00000393410 SOWAHBA6NEL2 793 aa8.04□□□□□ -1.12
MDM2-208ENST00000393410 PTPN5P54829 565 aa8.04□□□□□ -1.12
MDM2-208ENST00000393410 ZC3H15Q8WU90 426 aaKnown RBP8.04□□□□□ -1.12
MDM2-208ENST00000393410 RBM46Q8TBY0 533 aaKnown RBP8.03□□□□□ -1.12
MDM2-208ENST00000393410 PXYLP1Q8TE99 480 aa8.03□□□□□ -1.12
MDM2-208ENST00000393410 RCCD1A6NED2 376 aa8.02□□□□□ -1.13
MDM2-208ENST00000393410 SWT1Q5T5J6 900 aaKnown RBP8.02□□□□□ -1.13
MDM2-208ENST00000393410 METTL3Q86U44 580 aaKnown RBP8.02□□□□□ -1.13
MDM2-208ENST00000393410 PHOX2BQ99453 314 aa8.02□□□□□ -1.13
MDM2-208ENST00000393410 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.02□□□□□ -1.13
MDM2-208ENST00000393410 HCSTQ9UBK5 93 aa8.02□□□□□ -1.13
MDM2-208ENST00000393410 ZMYND10O75800 440 aa8.01□□□□□ -1.13
MDM2-208ENST00000393410 OATP04181 439 aa8.01□□□□□ -1.13
MDM2-208ENST00000393410 MAP2K5Q13163 448 aa8.01□□□□□ -1.13
MDM2-208ENST00000393410 LRCH3Q96II8 777 aa8.01□□□□□ -1.13
MDM2-208ENST00000393410 IRF6O14896 467 aa8□□□□□ -1.13
MDM2-208ENST00000393410 DNAJB2P25686 324 aa8□□□□□ -1.13
MDM2-208ENST00000393410 BARGINQ6ZT62 677 aa8□□□□□ -1.13
MDM2-208ENST00000393410 NLRP7Q8WX94 980 aa8□□□□□ -1.13
MDM2-208ENST00000393410 WBP1LQ9NX94 342 aa8□□□□□ -1.13
MDM2-208ENST00000393410 TMEM134Q9H6X4 195 aa7.99□□□□□ -1.13
MDM2-208ENST00000393410 HPS5Q9UPZ3 1129 aa7.99□□□□□ -1.13
MDM2-208ENST00000393410 TSR3Q9UJK0 312 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms