RNA–Protein interactions for RNA: ENST00000393359.6

TGFBRAP1-202, Transcript of transforming growth factor beta receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBRAP1, Length 5,979 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1-202ENST00000393359 TPM3P06753 285 aa28.42■■■□□ 2.14
TGFBRAP1-202ENST00000393359 SF3A1Q15459 793 aaKnown RBP28.42■■■□□ 2.14
TGFBRAP1-202ENST00000393359 RILPL2Q969X0 211 aa28.42■■■□□ 2.14
TGFBRAP1-202ENST00000393359 DDX11L8A8MPP1 907 aa28.42■■■□□ 2.14
TGFBRAP1-202ENST00000393359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.42■■■□□ 2.14
TGFBRAP1-202ENST00000393359 EIF3AQ14152 1382 aaKnown RBP28.41■■■□□ 2.14
TGFBRAP1-202ENST00000393359 LTV1Q96GA3 475 aaPredicted RBP28.41■■■□□ 2.14
TGFBRAP1-202ENST00000393359 BCL2L13Q9BXK5 485 aa28.41■■■□□ 2.14
TGFBRAP1-202ENST00000393359 CCAR2Q8N163 923 aaKnown RBP28.4■■■□□ 2.14
TGFBRAP1-202ENST00000393359 VPS53Q5VIR6 699 aa28.4■■■□□ 2.14
TGFBRAP1-202ENST00000393359 VPS8Q8N3P4 1428 aa28.39■■■□□ 2.14
TGFBRAP1-202ENST00000393359 H3BQV1 296 aa28.38■■■□□ 2.13
TGFBRAP1-202ENST00000393359 IFFO2Q5TF58 517 aa28.38■■■□□ 2.13
TGFBRAP1-202ENST00000393359 DDX49Q9Y6V7 483 aaKnown RBP28.37■■■□□ 2.13
TGFBRAP1-202ENST00000393359 L3MBTL2Q969R5 705 aa28.36■■■□□ 2.13
TGFBRAP1-202ENST00000393359 PDE4AP27815 886 aa28.35■■■□□ 2.13
TGFBRAP1-202ENST00000393359 ANKRD45Q5TZF3 282 aa28.35■■■□□ 2.13
TGFBRAP1-202ENST00000393359 TMX4Q9H1E5 349 aaPredicted RBP28.35■■■□□ 2.13
TGFBRAP1-202ENST00000393359 ELL2O00472 640 aaPredicted RBP28.35■■■□□ 2.13
TGFBRAP1-202ENST00000393359 TPD52L1Q16890 204 aaPredicted RBP28.34■■■□□ 2.13
TGFBRAP1-202ENST00000393359 NUTM2FA1L443 756 aa28.34■■■□□ 2.13
TGFBRAP1-202ENST00000393359 MARCH6O60337 910 aa28.33■■■□□ 2.13
TGFBRAP1-202ENST00000393359 NLRP13Q86W25 1043 aa28.33■■■□□ 2.12
TGFBRAP1-202ENST00000393359 EXOC6Q8TAG9 804 aa28.33■■■□□ 2.12
TGFBRAP1-202ENST00000393359 GSE1Q14687 1217 aa28.32■■■□□ 2.12
TGFBRAP1-202ENST00000393359 TERF2IPQ9NYB0 399 aa28.32■■■□□ 2.12
TGFBRAP1-202ENST00000393359 ZNF592Q92610 1267 aa28.32■■■□□ 2.12
TGFBRAP1-202ENST00000393359 FAM161AQ3B820 660 aa28.31■■■□□ 2.12
TGFBRAP1-202ENST00000393359 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.3■■■□□ 2.12
TGFBRAP1-202ENST00000393359 G3V3G9 751 aa28.3■■■□□ 2.12
TGFBRAP1-202ENST00000393359 DCAF8Q5TAQ9 597 aa28.3■■■□□ 2.12
TGFBRAP1-202ENST00000393359 CEP89Q96ST8 783 aa28.3■■■□□ 2.12
TGFBRAP1-202ENST00000393359 CRBNQ96SW2 442 aa28.3■■■□□ 2.12
TGFBRAP1-202ENST00000393359 VSIG10Q8N0Z9 540 aa28.3■■■□□ 2.12
TGFBRAP1-202ENST00000393359 FRAT2O75474 233 aaPredicted RBP28.3■■■□□ 2.12
TGFBRAP1-202ENST00000393359 AMPHP49418 695 aa28.3■■■□□ 2.12
TGFBRAP1-202ENST00000393359 RSPH6AQ9H0K4 717 aa28.3■■■□□ 2.12
TGFBRAP1-202ENST00000393359 PDE3BQ13370 1112 aa28.28■■■□□ 2.12
TGFBRAP1-202ENST00000393359 FAM184AQ8NB25 1140 aa28.28■■■□□ 2.12
TGFBRAP1-202ENST00000393359 PATL2C9JE40 543 aaKnown RBP28.28■■■□□ 2.12
TGFBRAP1-202ENST00000393359 CENPQQ7L2Z9 268 aaPredicted RBP28.28■■■□□ 2.12
TGFBRAP1-202ENST00000393359 GOLGA6L19H0YKK7 550 aa28.28■■■□□ 2.12
TGFBRAP1-202ENST00000393359 ANKRD30AQ9BXX3 1397 aa28.27■■■□□ 2.12
TGFBRAP1-202ENST00000393359 ABCC8Q09428 1581 aa28.27■■■□□ 2.12
TGFBRAP1-202ENST00000393359 HNRNPMP52272 730 aaKnown RBP eCLIP28.26■■■□□ 2.11
TGFBRAP1-202ENST00000393359 NGDNQ8NEJ9 315 aaKnown RBP28.26■■■□□ 2.11
TGFBRAP1-202ENST00000393359 LMOD3Q0VAK6 560 aa28.25■■■□□ 2.11
TGFBRAP1-202ENST00000393359 MCTP1Q6DN14 999 aa28.25■■■□□ 2.11
TGFBRAP1-202ENST00000393359 HDAC5Q9UQL6 1122 aa28.24■■■□□ 2.11
TGFBRAP1-202ENST00000393359 KIF15Q9NS87 1388 aa28.23■■■□□ 2.11
TGFBRAP1-202ENST00000393359 BECN2A8MW95 431 aa28.23■■■□□ 2.11
TGFBRAP1-202ENST00000393359 SETQ01105 290 aaPredicted RBP28.23■■■□□ 2.11
TGFBRAP1-202ENST00000393359 KIF3BO15066 747 aa28.23■■■□□ 2.11
TGFBRAP1-202ENST00000393359 MYBBP1AQ9BQG0 1328 aaKnown RBP28.23■■■□□ 2.11
TGFBRAP1-202ENST00000393359 WWC1Q8IX03 1113 aa28.23■■■□□ 2.11
TGFBRAP1-202ENST00000393359 ZNF771Q7L3S4 317 aaPredicted RBP28.22■■■□□ 2.11
TGFBRAP1-202ENST00000393359 TRAK1Q9UPV9 953 aa28.22■■■□□ 2.11
TGFBRAP1-202ENST00000393359 CHMP4AQ9BY43 222 aa28.22■■■□□ 2.11
TGFBRAP1-202ENST00000393359 KIF3AQ9Y496 699 aa28.22■■■□□ 2.11
TGFBRAP1-202ENST00000393359 PANK3Q9H999 370 aa28.22■■■□□ 2.11
TGFBRAP1-202ENST00000393359 FMN1Q68DA7 1419 aa28.21■■■□□ 2.11
TGFBRAP1-202ENST00000393359 RRP1P56182 461 aaKnown RBP28.21■■■□□ 2.11
TGFBRAP1-202ENST00000393359 COG6Q9Y2V7 657 aa28.21■■■□□ 2.11
TGFBRAP1-202ENST00000393359 USP35Q9P2H5 1018 aa28.21■■■□□ 2.11
TGFBRAP1-202ENST00000393359 TSR1Q2NL82 804 aaKnown RBP28.19■■■□□ 2.1
TGFBRAP1-202ENST00000393359 SKOR2Q2VWA4 1001 aaPredicted RBP28.18■■■□□ 2.1
TGFBRAP1-202ENST00000393359 GTF2E1P29083 439 aaPredicted RBP28.15■■■□□ 2.1
TGFBRAP1-202ENST00000393359 FBXW7Q969H0 707 aa28.15■■■□□ 2.1
TGFBRAP1-202ENST00000393359 PHLDB1Q86UU1 1377 aa28.14■■■□□ 2.1
TGFBRAP1-202ENST00000393359 ZKSCAN2Q63HK3 967 aa28.14■■■□□ 2.1
TGFBRAP1-202ENST00000393359 NGEFQ8N5V2 710 aa28.14■■■□□ 2.09
TGFBRAP1-202ENST00000393359 ST20-MTHFSA0A0A6YYL1 179 aa28.13■■■□□ 2.09
TGFBRAP1-202ENST00000393359 BCL11BQ9C0K0 894 aaPredicted RBP28.13■■■□□ 2.09
TGFBRAP1-202ENST00000393359 FBXO3Q9UK99 471 aa28.12■■■□□ 2.09
TGFBRAP1-202ENST00000393359 AKAP17AQ02040 695 aaKnown RBP28.12■■■□□ 2.09
TGFBRAP1-202ENST00000393359 ANO2Q9NQ90 1003 aa28.12■■■□□ 2.09
TGFBRAP1-202ENST00000393359 PCMTD1Q96MG8 357 aaPredicted RBP28.12■■■□□ 2.09
TGFBRAP1-202ENST00000393359 ATP6V1DQ9Y5K8 247 aa28.12■■■□□ 2.09
TGFBRAP1-202ENST00000393359 DIAPH3Q9NSV4 1193 aa28.11■■■□□ 2.09
TGFBRAP1-202ENST00000393359 FAM13BQ9NYF5 915 aa28.11■■■□□ 2.09
TGFBRAP1-202ENST00000393359 TPM2P07951 284 aa28.11■■■□□ 2.09
TGFBRAP1-202ENST00000393359 NECTIN2Q92692 538 aa28.11■■■□□ 2.09
TGFBRAP1-202ENST00000393359 CECR2Q9BXF3 1484 aa28.1■■■□□ 2.09
TGFBRAP1-202ENST00000393359 TPM1P09493 284 aa28.1■■■□□ 2.09
TGFBRAP1-202ENST00000393359 EFCAB2Q5VUJ9 269 aa28.1■■■□□ 2.09
TGFBRAP1-202ENST00000393359 BAZ1AQ9NRL2 1556 aaPredicted RBP28.09■■■□□ 2.09
TGFBRAP1-202ENST00000393359 RAD21O60216 631 aa28.09■■■□□ 2.09
TGFBRAP1-202ENST00000393359 CARMIL2Q6F5E8 1435 aa28.09■■■□□ 2.09
TGFBRAP1-202ENST00000393359 FOSBP53539 338 aa28.08■■■□□ 2.09
TGFBRAP1-202ENST00000393359 E9PSI1 815 aa28.07■■■□□ 2.08
TGFBRAP1-202ENST00000393359 EIF2S2P20042 333 aaKnown RBP28.06■■■□□ 2.08
TGFBRAP1-202ENST00000393359 GPS2Q13227 327 aa28.06■■■□□ 2.08
TGFBRAP1-202ENST00000393359 WASHC2CQ9Y4E1 1318 aa28.05■■■□□ 2.08
TGFBRAP1-202ENST00000393359 CCDC70Q6NSX1 233 aa28.05■■■□□ 2.08
TGFBRAP1-202ENST00000393359 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
TGFBRAP1-202ENST00000393359 SYNE3Q6ZMZ3 975 aa28.04■■■□□ 2.08
TGFBRAP1-202ENST00000393359 HOMER1Q86YM7 354 aa28.02■■■□□ 2.08
TGFBRAP1-202ENST00000393359 EID1Q9Y6B2 187 aa28.02■■■□□ 2.08
TGFBRAP1-202ENST00000393359 BICD2Q8TD16 824 aa28.02■■■□□ 2.08
TGFBRAP1-202ENST00000393359 C1orf141Q5JVX7 400 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms