RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-203ENST00000393272 SEC24BO95487 1268 aa9.25□□□□□ -0.93
NPHP1-203ENST00000393272 BECN1Q14457 450 aa9.25□□□□□ -0.93
NPHP1-203ENST00000393272 PARD3Q8TEW0 1356 aa9.25□□□□□ -0.93
NPHP1-203ENST00000393272 NLRP1Q9C000 1473 aa9.25□□□□□ -0.93
NPHP1-203ENST00000393272 ESPNB1AK53 854 aa9.24□□□□□ -0.93
NPHP1-203ENST00000393272 ZMYM4Q5VZL5 1548 aa9.24□□□□□ -0.93
NPHP1-203ENST00000393272 HMGXB3Q12766 1538 aa9.24□□□□□ -0.93
NPHP1-203ENST00000393272 PDCL3Q9H2J4 239 aa9.24□□□□□ -0.93
NPHP1-203ENST00000393272 SAMD9Q5K651 1589 aa9.23□□□□□ -0.93
NPHP1-203ENST00000393272 A0A0U1RQG5 324 aaPredicted RBP9.23□□□□□ -0.93
NPHP1-203ENST00000393272 CENPJQ9HC77 1338 aaPredicted RBP9.23□□□□□ -0.93
NPHP1-203ENST00000393272 RALGAPBQ86X10 1494 aa9.23□□□□□ -0.93
NPHP1-203ENST00000393272 PRDM4Q9UKN5 801 aa9.23□□□□□ -0.93
NPHP1-203ENST00000393272 PLEKHH2Q8IVE3 1493 aa9.22□□□□□ -0.93
NPHP1-203ENST00000393272 ST20-MTHFSA0A0A6YYL1 179 aa9.22□□□□□ -0.93
NPHP1-203ENST00000393272 RBM10P98175 930 aaKnown RBP9.22□□□□□ -0.93
NPHP1-203ENST00000393272 CARD11Q9BXL7 1154 aa9.22□□□□□ -0.93
NPHP1-203ENST00000393272 PZPP20742 1482 aa9.22□□□□□ -0.93
NPHP1-203ENST00000393272 TPM2P07951 284 aa9.22□□□□□ -0.93
NPHP1-203ENST00000393272 MCM4P33991 863 aa9.22□□□□□ -0.93
NPHP1-203ENST00000393272 MRE11P49959 708 aa9.22□□□□□ -0.93
NPHP1-203ENST00000393272 CALD1Q05682 793 aaKnown RBP9.22□□□□□ -0.93
NPHP1-203ENST00000393272 MYH16Q9H6N6 1097 aa9.22□□□□□ -0.93
NPHP1-203ENST00000393272 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
NPHP1-203ENST00000393272 GRPEL1Q9HAV7 217 aa9.2□□□□□ -0.94
NPHP1-203ENST00000393272 DAPK1P53355 1430 aa9.2□□□□□ -0.94
NPHP1-203ENST00000393272 ZNF608Q9ULD9 1512 aaPredicted RBP9.2□□□□□ -0.94
NPHP1-203ENST00000393272 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
NPHP1-203ENST00000393272 ROCK1Q13464 1354 aa9.2□□□□□ -0.94
NPHP1-203ENST00000393272 CUL7Q14999 1698 aa9.2□□□□□ -0.94
NPHP1-203ENST00000393272 CC2D2AQ9P2K1 1620 aa9.2□□□□□ -0.94
NPHP1-203ENST00000393272 TRAK2O60296 914 aa9.19□□□□□ -0.94
NPHP1-203ENST00000393272 SPRYD3Q8NCJ5 442 aa9.19□□□□□ -0.94
NPHP1-203ENST00000393272 INSRP06213 1382 aa9.19□□□□□ -0.94
NPHP1-203ENST00000393272 PLEKHH1Q9ULM0 1364 aa9.19□□□□□ -0.94
NPHP1-203ENST00000393272 IGHDP01880 384 aa9.18□□□□□ -0.94
NPHP1-203ENST00000393272 AAMPQ13685 434 aa9.18□□□□□ -0.94
NPHP1-203ENST00000393272 UHRF1BP1Q6BDS2 1440 aa9.18□□□□□ -0.94
NPHP1-203ENST00000393272 EIF3AQ14152 1382 aaKnown RBP9.18□□□□□ -0.94
NPHP1-203ENST00000393272 KIAA1211Q6ZU35 1233 aa9.18□□□□□ -0.94
NPHP1-203ENST00000393272 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.18□□□□□ -0.94
NPHP1-203ENST00000393272 TRIM44Q96DX7 344 aaPredicted RBP9.18□□□□□ -0.94
NPHP1-203ENST00000393272 DNMT1P26358 1616 aaKnown RBP9.18□□□□□ -0.94
NPHP1-203ENST00000393272 KIAA1107Q9UPP5 1409 aa9.18□□□□□ -0.94
NPHP1-203ENST00000393272 CC2D1BQ5T0F9 858 aaKnown RBP9.18□□□□□ -0.94
NPHP1-203ENST00000393272 ABCC5O15440 1437 aa9.17□□□□□ -0.94
NPHP1-203ENST00000393272 RAD54L2Q9Y4B4 1467 aa9.17□□□□□ -0.94
NPHP1-203ENST00000393272 PER1O15534 1290 aaPredicted RBP9.17□□□□□ -0.94
NPHP1-203ENST00000393272 TBC1D32Q96NH3 1257 aa9.17□□□□□ -0.94
NPHP1-203ENST00000393272 KIF21AQ7Z4S6 1674 aa9.16□□□□□ -0.94
NPHP1-203ENST00000393272 MAPK8IP3Q9UPT6 1336 aa9.16□□□□□ -0.94
NPHP1-203ENST00000393272 NESP48681 1621 aa9.15□□□□□ -0.94
NPHP1-203ENST00000393272 ADAMTS8Q9UP79 889 aa9.15□□□□□ -0.94
NPHP1-203ENST00000393272 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.95
NPHP1-203ENST00000393272 CDK13Q14004 1512 aaKnown RBP9.15□□□□□ -0.95
NPHP1-203ENST00000393272 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.95
NPHP1-203ENST00000393272 UPF2Q9HAU5 1272 aaKnown RBP9.14□□□□□ -0.95
NPHP1-203ENST00000393272 RIPK4P57078 832 aa9.14□□□□□ -0.95
NPHP1-203ENST00000393272 PKD2Q13563 968 aa9.14□□□□□ -0.95
NPHP1-203ENST00000393272 ZNF521Q96K83 1311 aa9.14□□□□□ -0.95
NPHP1-203ENST00000393272 KIAA0586Q9BVV6 1533 aa9.14□□□□□ -0.95
NPHP1-203ENST00000393272 ZNF644Q9H582 1327 aaPredicted RBP9.14□□□□□ -0.95
NPHP1-203ENST00000393272 KDM2AQ9Y2K7 1162 aa9.14□□□□□ -0.95
NPHP1-203ENST00000393272 EPRSP07814 1512 aaKnown RBP9.13□□□□□ -0.95
NPHP1-203ENST00000393272 ARHGEF12Q9NZN5 1544 aa9.13□□□□□ -0.95
NPHP1-203ENST00000393272 GOLGA2Q08379 1002 aa9.13□□□□□ -0.95
NPHP1-203ENST00000393272 GAS2L3Q86XJ1 694 aa9.13□□□□□ -0.95
NPHP1-203ENST00000393272 CHMP5Q9NZZ3 219 aa9.13□□□□□ -0.95
NPHP1-203ENST00000393272 ISY1Q9ULR0 285 aaKnown RBP9.13□□□□□ -0.95
NPHP1-203ENST00000393272 BCAR3O75815 825 aa9.13□□□□□ -0.95
NPHP1-203ENST00000393272 ARID3CA6NKF2 412 aa9.12□□□□□ -0.95
NPHP1-203ENST00000393272 FGD1P98174 961 aa9.12□□□□□ -0.95
NPHP1-203ENST00000393272 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
NPHP1-203ENST00000393272 SENP3Q9H4L4 574 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-203ENST00000393272 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
NPHP1-203ENST00000393272 OFD1O75665 1012 aa9.11□□□□□ -0.95
NPHP1-203ENST00000393272 SLFN5Q08AF3 891 aa9.11□□□□□ -0.95
NPHP1-203ENST00000393272 CLUAP1Q96AJ1 413 aa9.1□□□□□ -0.95
NPHP1-203ENST00000393272 SPINK5Q9NQ38 1064 aaPredicted RBP9.1□□□□□ -0.95
NPHP1-203ENST00000393272 POLA1P09884 1462 aaPredicted RBP9.1□□□□□ -0.95
NPHP1-203ENST00000393272 NKTRP30414 1462 aaKnown RBP9.1□□□□□ -0.95
NPHP1-203ENST00000393272 RTEL1-TNFRSF6BF6WH68 1400 aa9.1□□□□□ -0.95
NPHP1-203ENST00000393272 CAMSAP2Q08AD1 1489 aa9.09□□□□□ -0.95
NPHP1-203ENST00000393272 COL17A1Q9UMD9 1497 aaPredicted RBP9.09□□□□□ -0.95
NPHP1-203ENST00000393272 CGNL1Q0VF96 1302 aa9.09□□□□□ -0.95
NPHP1-203ENST00000393272 WDR43Q15061 677 aaKnown RBP eCLIP9.09□□□□□ -0.95
NPHP1-203ENST00000393272 ZSCAN30Q86W11 494 aa9.09□□□□□ -0.95
NPHP1-203ENST00000393272 ARID3AQ99856 593 aa9.09□□□□□ -0.95
NPHP1-203ENST00000393272 CADPSQ9ULU8 1353 aa9.09□□□□□ -0.95
NPHP1-203ENST00000393272 CLASP1Q7Z460 1538 aa9.09□□□□□ -0.95
NPHP1-203ENST00000393272 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.09□□□□□ -0.95
NPHP1-203ENST00000393272 ZNF692Q9BU19 519 aaPredicted RBP9.09□□□□□ -0.95
NPHP1-203ENST00000393272 PANK3Q9H999 370 aa9.09□□□□□ -0.95
NPHP1-203ENST00000393272 ADGBQ8N7X0 1667 aa9.09□□□□□ -0.95
NPHP1-203ENST00000393272 MAP7D2Q96T17 732 aa9.08□□□□□ -0.96
NPHP1-203ENST00000393272 COG6Q9Y2V7 657 aa9.08□□□□□ -0.96
NPHP1-203ENST00000393272 DISP3Q9P2K9 1392 aa9.08□□□□□ -0.96
NPHP1-203ENST00000393272 CEP170Q5SW79 1584 aa9.08□□□□□ -0.96
NPHP1-203ENST00000393272 TRMT2AQ8IZ69 625 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms