RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 HECW1Q76N89 1606 aa13.08□□□□□ -0.32
CASP4-201ENST00000393150 ARHGEF12Q9NZN5 1544 aa13.07□□□□□ -0.32
CASP4-201ENST00000393150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.07□□□□□ -0.32
CASP4-201ENST00000393150 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
CASP4-201ENST00000393150 SAMD9Q5K651 1589 aa13.06□□□□□ -0.32
CASP4-201ENST00000393150 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
CASP4-201ENST00000393150 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
CASP4-201ENST00000393150 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
CASP4-201ENST00000393150 AFAP1Q8N556 730 aa13.03□□□□□ -0.32
CASP4-201ENST00000393150 RNF25Q96BH1 459 aaPredicted RBP13.02□□□□□ -0.33
CASP4-201ENST00000393150 CNTLNQ9NXG0 1405 aa13.02□□□□□ -0.33
CASP4-201ENST00000393150 STRCQ7RTU9 1775 aa13.02□□□□□ -0.33
CASP4-201ENST00000393150 FAM212AQ96EL1 285 aa13.01□□□□□ -0.33
CASP4-201ENST00000393150 TOM1O60784 492 aa13□□□□□ -0.33
CASP4-201ENST00000393150 FARP1Q9Y4F1 1045 aaPredicted RBP13□□□□□ -0.33
CASP4-201ENST00000393150 CLIP1P30622 1438 aa12.99□□□□□ -0.33
CASP4-201ENST00000393150 HAX1O00165 279 aa12.99□□□□□ -0.33
CASP4-201ENST00000393150 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
CASP4-201ENST00000393150 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
CASP4-201ENST00000393150 NCOA1Q15788 1441 aa12.97□□□□□ -0.33
CASP4-201ENST00000393150 ARHGAP5Q13017 1502 aa12.97□□□□□ -0.33
CASP4-201ENST00000393150 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.33
CASP4-201ENST00000393150 PIP4K2BP78356 416 aa12.96□□□□□ -0.33
CASP4-201ENST00000393150 EEA1Q15075 1411 aa12.96□□□□□ -0.34
CASP4-201ENST00000393150 LTBP4Q8N2S1 1624 aa12.96□□□□□ -0.34
CASP4-201ENST00000393150 SIGLEC1Q9BZZ2 1709 aa12.95□□□□□ -0.34
CASP4-201ENST00000393150 FMN1Q68DA7 1419 aa12.95□□□□□ -0.34
CASP4-201ENST00000393150 ZNF335Q9H4Z2 1342 aaPredicted RBP12.94□□□□□ -0.34
CASP4-201ENST00000393150 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
CASP4-201ENST00000393150 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
CASP4-201ENST00000393150 NPATQ14207 1427 aa12.93□□□□□ -0.34
CASP4-201ENST00000393150 MYO5CQ9NQX4 1742 aa12.93□□□□□ -0.34
CASP4-201ENST00000393150 CDK13Q14004 1512 aaKnown RBP12.93□□□□□ -0.34
CASP4-201ENST00000393150 AGLP35573 1532 aa12.92□□□□□ -0.34
CASP4-201ENST00000393150 ZMYM3Q14202 1370 aa12.92□□□□□ -0.34
CASP4-201ENST00000393150 CAMSAP1Q5T5Y3 1602 aa12.92□□□□□ -0.34
CASP4-201ENST00000393150 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
CASP4-201ENST00000393150 BBXQ8WY36 941 aaPredicted RBP12.91□□□□□ -0.34
CASP4-201ENST00000393150 C3P01024 1663 aa12.91□□□□□ -0.34
CASP4-201ENST00000393150 HSPA1LP34931 641 aa12.9□□□□□ -0.34
CASP4-201ENST00000393150 KIF14Q15058 1648 aa12.9□□□□□ -0.34
CASP4-201ENST00000393150 REREQ9P2R6 1566 aa12.9□□□□□ -0.34
CASP4-201ENST00000393150 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
CASP4-201ENST00000393150 KDM5CP41229 1560 aa12.88□□□□□ -0.35
CASP4-201ENST00000393150 SPAG9O60271 1321 aaKnown RBP12.88□□□□□ -0.35
CASP4-201ENST00000393150 ZNF777Q9ULD5 760 aaPredicted RBP12.88□□□□□ -0.35
CASP4-201ENST00000393150 DIP2CQ9Y2E4 1556 aa12.87□□□□□ -0.35
CASP4-201ENST00000393150 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
CASP4-201ENST00000393150 GGT6Q6P531 493 aa12.87□□□□□ -0.35
CASP4-201ENST00000393150 CHGAP10645 457 aaKnown RBP12.86□□□□□ -0.35
CASP4-201ENST00000393150 PYGBP11216 843 aa12.86□□□□□ -0.35
CASP4-201ENST00000393150 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
CASP4-201ENST00000393150 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
CASP4-201ENST00000393150 PTPRKQ15262 1439 aa12.84□□□□□ -0.35
CASP4-201ENST00000393150 HS6ST3Q8IZP7 471 aa12.84□□□□□ -0.35
CASP4-201ENST00000393150 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
CASP4-201ENST00000393150 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
CASP4-201ENST00000393150 THEMISQ8N1K5 641 aaPredicted RBP12.81□□□□□ -0.36
CASP4-201ENST00000393150 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
CASP4-201ENST00000393150 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
CASP4-201ENST00000393150 CPS1P31327 1500 aa12.8□□□□□ -0.36
CASP4-201ENST00000393150 EVX2Q03828 476 aa12.8□□□□□ -0.36
CASP4-201ENST00000393150 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
CASP4-201ENST00000393150 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
CASP4-201ENST00000393150 SUPT6HQ7KZ85 1726 aaKnown RBP12.79□□□□□ -0.36
CASP4-201ENST00000393150 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
CASP4-201ENST00000393150 HNRNPMP52272 730 aaKnown RBP eCLIP12.78□□□□□ -0.36
CASP4-201ENST00000393150 CFDP1Q9UEE9 299 aaPredicted RBP12.78□□□□□ -0.36
CASP4-201ENST00000393150 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
CASP4-201ENST00000393150 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
CASP4-201ENST00000393150 ABCC1P33527 1531 aa12.77□□□□□ -0.37
CASP4-201ENST00000393150 CEP170BQ9Y4F5 1589 aaPredicted RBP12.77□□□□□ -0.37
CASP4-201ENST00000393150 CCDC18Q5T9S5 1454 aa12.76□□□□□ -0.37
CASP4-201ENST00000393150 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
CASP4-201ENST00000393150 SHANK2Q9UPX8 1470 aa12.76□□□□□ -0.37
CASP4-201ENST00000393150 PLEKHH2Q8IVE3 1493 aa12.75□□□□□ -0.37
CASP4-201ENST00000393150 A2ML1A8K2U0 1454 aa12.74□□□□□ -0.37
CASP4-201ENST00000393150 A2MP01023 1474 aa12.74□□□□□ -0.37
CASP4-201ENST00000393150 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
CASP4-201ENST00000393150 KIDINS220Q9ULH0 1771 aa12.73□□□□□ -0.37
CASP4-201ENST00000393150 CDC42BPBQ9Y5S2 1711 aa12.73□□□□□ -0.37
CASP4-201ENST00000393150 PREX2Q70Z35 1606 aa12.73□□□□□ -0.37
CASP4-201ENST00000393150 MYO3AQ8NEV4 1616 aa12.73□□□□□ -0.37
CASP4-201ENST00000393150 ZNF142P52746 1687 aaPredicted RBP12.72□□□□□ -0.37
CASP4-201ENST00000393150 ITSN2Q9NZM3 1697 aa12.72□□□□□ -0.37
CASP4-201ENST00000393150 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
CASP4-201ENST00000393150 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
CASP4-201ENST00000393150 CLTCQ00610 1675 aaKnown RBP12.72□□□□□ -0.37
CASP4-201ENST00000393150 TNRQ92752 1358 aa12.72□□□□□ -0.37
CASP4-201ENST00000393150 WASHC2CQ9Y4E1 1318 aa12.71□□□□□ -0.37
CASP4-201ENST00000393150 SAMD9LQ8IVG5 1584 aa12.71□□□□□ -0.37
CASP4-201ENST00000393150 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
CASP4-201ENST00000393150 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
CASP4-201ENST00000393150 CFAP44Q96MT7 982 aa12.71□□□□□ -0.37
CASP4-201ENST00000393150 ARHGAP35Q9NRY4 1499 aa12.71□□□□□ -0.37
CASP4-201ENST00000393150 KIAA1107Q9UPP5 1409 aa12.71□□□□□ -0.38
CASP4-201ENST00000393150 CCNB3Q8WWL7 1395 aa12.7□□□□□ -0.38
CASP4-201ENST00000393150 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
CASP4-201ENST00000393150 ATP7AQ04656 1500 aa12.69□□□□□ -0.38
CASP4-201ENST00000393150 FAM135AQ9P2D6 1515 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms