RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 DCAF11Q8TEB1 546 aa16.85■□□□□ 0.29
RFC5-201ENST00000392542 KDM2AQ9Y2K7 1162 aa16.85■□□□□ 0.29
RFC5-201ENST00000392542 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
RFC5-201ENST00000392542 CCDC144AA2RUR9 1427 aa16.84■□□□□ 0.29
RFC5-201ENST00000392542 TRPM1Q7Z4N2 1603 aa16.83■□□□□ 0.28
RFC5-201ENST00000392542 ERICH6BQ5W0A0 696 aa16.82■□□□□ 0.28
RFC5-201ENST00000392542 ZCCHC11Q5TAX3 1644 aaKnown RBP16.82■□□□□ 0.28
RFC5-201ENST00000392542 DUOX2Q9NRD8 1548 aa16.82■□□□□ 0.28
RFC5-201ENST00000392542 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
RFC5-201ENST00000392542 PRAG1Q86YV5 1406 aa16.81■□□□□ 0.28
RFC5-201ENST00000392542 UHRF1BP1LA0JNW5 1464 aa16.81■□□□□ 0.28
RFC5-201ENST00000392542 PLA2R1Q13018 1463 aa16.81■□□□□ 0.28
RFC5-201ENST00000392542 E9PCH4 1651 aa16.81■□□□□ 0.28
RFC5-201ENST00000392542 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
RFC5-201ENST00000392542 PLCH2O75038 1416 aa16.8■□□□□ 0.28
RFC5-201ENST00000392542 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
RFC5-201ENST00000392542 IRX6P78412 446 aaPredicted RBP16.79■□□□□ 0.28
RFC5-201ENST00000392542 ERBINQ96RT1 1412 aa16.78■□□□□ 0.28
RFC5-201ENST00000392542 A2MP01023 1474 aa16.77■□□□□ 0.28
RFC5-201ENST00000392542 ABCC1P33527 1531 aa16.77■□□□□ 0.28
RFC5-201ENST00000392542 LAMC1P11047 1609 aa16.77■□□□□ 0.28
RFC5-201ENST00000392542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.277e-7■■□□□ 12.5
RFC5-201ENST00000392542 ATP10AO60312 1499 aa16.76■□□□□ 0.27
RFC5-201ENST00000392542 GPRASP1Q5JY77 1395 aa16.75■□□□□ 0.27
RFC5-201ENST00000392542 CNGB1Q14028 1251 aaPredicted RBP16.75■□□□□ 0.27
RFC5-201ENST00000392542 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
RFC5-201ENST00000392542 EFCAB2Q5VUJ9 269 aa16.75■□□□□ 0.27
RFC5-201ENST00000392542 EIF2AK4Q9P2K8 1649 aaKnown RBP16.74■□□□□ 0.27
RFC5-201ENST00000392542 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
RFC5-201ENST00000392542 PPP4R2Q9NY27 417 aa16.73■□□□□ 0.27
RFC5-201ENST00000392542 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
RFC5-201ENST00000392542 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
RFC5-201ENST00000392542 RGL3Q3MIN7 710 aa16.72■□□□□ 0.27
RFC5-201ENST00000392542 PNISRQ8TF01 805 aaKnown RBP16.71■□□□□ 0.27
RFC5-201ENST00000392542 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
RFC5-201ENST00000392542 ARAP3Q8WWN8 1544 aa16.7■□□□□ 0.26
RFC5-201ENST00000392542 RALBP1Q15311 655 aa16.7■□□□□ 0.26
RFC5-201ENST00000392542 TMC1Q8TDI8 760 aa16.7■□□□□ 0.26
RFC5-201ENST00000392542 BRD4O60885 1362 aaPredicted RBP16.7■□□□□ 0.26
RFC5-201ENST00000392542 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
RFC5-201ENST00000392542 NBPF1Q3BBV0 1214 aa16.69■□□□□ 0.26
RFC5-201ENST00000392542 COL17A1Q9UMD9 1497 aaPredicted RBP16.68■□□□□ 0.26
RFC5-201ENST00000392542 NUDCQ9Y266 331 aa16.68■□□□□ 0.26
RFC5-201ENST00000392542 LRPPRCP42704 1394 aaKnown RBP16.67■□□□□ 0.26
RFC5-201ENST00000392542 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
RFC5-201ENST00000392542 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
RFC5-201ENST00000392542 ZFYVE16Q7Z3T8 1539 aa16.66■□□□□ 0.26
RFC5-201ENST00000392542 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
RFC5-201ENST00000392542 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
RFC5-201ENST00000392542 TESK2Q96S53 571 aa16.63■□□□□ 0.25
RFC5-201ENST00000392542 DEPDC5O75140 1603 aa16.62■□□□□ 0.25
RFC5-201ENST00000392542 TRPM2O94759 1503 aa16.62■□□□□ 0.25
RFC5-201ENST00000392542 RNF123Q5XPI4 1314 aa16.62■□□□□ 0.25
RFC5-201ENST00000392542 DISP3Q9P2K9 1392 aa16.62■□□□□ 0.25
RFC5-201ENST00000392542 CEP152O94986 1710 aa16.61■□□□□ 0.25
RFC5-201ENST00000392542 SPHKAPQ2M3C7 1700 aa16.61■□□□□ 0.25
RFC5-201ENST00000392542 ABCA9Q8IUA7 1624 aa16.61■□□□□ 0.25
RFC5-201ENST00000392542 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
RFC5-201ENST00000392542 MADDQ8WXG6 1647 aa16.6■□□□□ 0.25
RFC5-201ENST00000392542 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
RFC5-201ENST00000392542 NLRP13Q86W25 1043 aa16.6■□□□□ 0.25
RFC5-201ENST00000392542 ANP32EQ9BTT0 268 aa16.59■□□□□ 0.25
RFC5-201ENST00000392542 INO80Q9ULG1 1556 aaPredicted RBP16.59■□□□□ 0.25
RFC5-201ENST00000392542 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
RFC5-201ENST00000392542 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
RFC5-201ENST00000392542 AFAP1Q8N556 730 aa16.59■□□□□ 0.25
RFC5-201ENST00000392542 TET3O43151 1660 aa16.58■□□□□ 0.25
RFC5-201ENST00000392542 PTPRTO14522 1441 aa16.58■□□□□ 0.25
RFC5-201ENST00000392542 TMF1P82094 1093 aa16.58■□□□□ 0.24
RFC5-201ENST00000392542 IQGAP1P46940 1657 aa16.58■□□□□ 0.24
RFC5-201ENST00000392542 ATP7AQ04656 1500 aa16.58■□□□□ 0.24
RFC5-201ENST00000392542 CLTCL1P53675 1640 aa16.57■□□□□ 0.24
RFC5-201ENST00000392542 FANCAO15360 1455 aa16.56■□□□□ 0.24
RFC5-201ENST00000392542 VWDEQ8N2E2 1590 aa16.56■□□□□ 0.24
RFC5-201ENST00000392542 SENP3-EIF4A1A0A087X0R7 540 aa16.54■□□□□ 0.24
RFC5-201ENST00000392542 STAC3Q96MF2 364 aa16.54■□□□□ 0.24
RFC5-201ENST00000392542 PANK3Q9H999 370 aa16.54■□□□□ 0.24
RFC5-201ENST00000392542 KANK1Q14678 1352 aa16.53■□□□□ 0.24
RFC5-201ENST00000392542 SCAPERQ9BY12 1400 aa16.52■□□□□ 0.24
RFC5-201ENST00000392542 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.23
RFC5-201ENST00000392542 INSRP06213 1382 aa16.52■□□□□ 0.23
RFC5-201ENST00000392542 ADGRL1O94910 1474 aa16.52■□□□□ 0.23
RFC5-201ENST00000392542 ZMYM4Q5VZL5 1548 aa16.52■□□□□ 0.23
RFC5-201ENST00000392542 NEURL4Q96JN8 1562 aa16.51■□□□□ 0.23
RFC5-201ENST00000392542 CC2D1BQ5T0F9 858 aaKnown RBP16.5■□□□□ 0.23
RFC5-201ENST00000392542 SCAF11Q99590 1463 aaKnown RBP16.5■□□□□ 0.23
RFC5-201ENST00000392542 MROH1Q8NDA8 1641 aa16.5■□□□□ 0.23
RFC5-201ENST00000392542 KIAA1210Q9ULL0 1709 aa16.5■□□□□ 0.23
RFC5-201ENST00000392542 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
RFC5-201ENST00000392542 BLMP54132 1417 aaPredicted RBP16.48■□□□□ 0.23
RFC5-201ENST00000392542 ASXL2Q76L83 1435 aa16.47■□□□□ 0.23
RFC5-201ENST00000392542 SYNMO15061 1565 aa16.47■□□□□ 0.23
RFC5-201ENST00000392542 KIF3BO15066 747 aa16.47■□□□□ 0.23
RFC5-201ENST00000392542 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
RFC5-201ENST00000392542 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
RFC5-201ENST00000392542 MSH5O43196 834 aa16.45■□□□□ 0.22
RFC5-201ENST00000392542 CDCA8Q53HL2 280 aa16.45■□□□□ 0.22
RFC5-201ENST00000392542 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
RFC5-201ENST00000392542 KIF1BO60333 1816 aa16.44■□□□□ 0.22
RFC5-201ENST00000392542 EFCAB6Q5THR3 1501 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms