RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 KANK4Q5T7N3 995 aaPredicted RBP19.99■□□□□ 0.79
SHANK1-204ENST00000391814 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
SHANK1-204ENST00000391814 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.79
SHANK1-204ENST00000391814 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
SHANK1-204ENST00000391814 SOGA1O94964 1423 aa19.96■□□□□ 0.79
SHANK1-204ENST00000391814 TPM2P07951 284 aa19.96■□□□□ 0.79
SHANK1-204ENST00000391814 ZBED9Q6R2W3 1325 aa19.95■□□□□ 0.78
SHANK1-204ENST00000391814 APPP05067 770 aa19.94■□□□□ 0.78
SHANK1-204ENST00000391814 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
SHANK1-204ENST00000391814 CHMP5Q9NZZ3 219 aa19.93■□□□□ 0.78
SHANK1-204ENST00000391814 MCTP1Q6DN14 999 aa19.93■□□□□ 0.78
SHANK1-204ENST00000391814 GPATCH3Q96I76 525 aa19.93■□□□□ 0.78
SHANK1-204ENST00000391814 NOM1Q5C9Z4 860 aaKnown RBP19.93■□□□□ 0.78
SHANK1-204ENST00000391814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-204ENST00000391814 BECN2A8MW95 431 aa19.91■□□□□ 0.78
SHANK1-204ENST00000391814 H3BQV1 296 aa19.91■□□□□ 0.78
SHANK1-204ENST00000391814 PKD2Q13563 968 aa19.91■□□□□ 0.78
SHANK1-204ENST00000391814 IFFO2Q5TF58 517 aa19.91■□□□□ 0.78
SHANK1-204ENST00000391814 ANKRD45Q5TZF3 282 aa19.91■□□□□ 0.78
SHANK1-204ENST00000391814 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
SHANK1-204ENST00000391814 SF3A1Q15459 793 aaKnown RBP19.9■□□□□ 0.78
SHANK1-204ENST00000391814 KIF15Q9NS87 1388 aa19.9■□□□□ 0.78
SHANK1-204ENST00000391814 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
SHANK1-204ENST00000391814 PES1O00541 588 aaKnown RBP19.89■□□□□ 0.77
SHANK1-204ENST00000391814 SLC4A10Q6U841 1118 aa19.89■□□□□ 0.77
SHANK1-204ENST00000391814 MYBBP1AQ9BQG0 1328 aaKnown RBP19.89■□□□□ 0.77
SHANK1-204ENST00000391814 CCDC39Q9UFE4 941 aa19.89■□□□□ 0.77
SHANK1-204ENST00000391814 MAP7D2Q96T17 732 aa19.88■□□□□ 0.77
SHANK1-204ENST00000391814 HMMRO75330 724 aa19.88■□□□□ 0.77
SHANK1-204ENST00000391814 MRE11P49959 708 aa19.88■□□□□ 0.77
SHANK1-204ENST00000391814 CHMP3Q9Y3E7 222 aa19.88■□□□□ 0.77
SHANK1-204ENST00000391814 RILPL2Q969X0 211 aa19.88■□□□□ 0.77
SHANK1-204ENST00000391814 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
SHANK1-204ENST00000391814 NASPP49321 788 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-204ENST00000391814 RASSF8Q8NHQ8 419 aa19.87■□□□□ 0.77
SHANK1-204ENST00000391814 ZNF330Q9Y3S2 320 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-204ENST00000391814 HOMER1Q86YM7 354 aa19.87■□□□□ 0.77
SHANK1-204ENST00000391814 TPD52L1Q16890 204 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-204ENST00000391814 BCL2L13Q9BXK5 485 aa19.87■□□□□ 0.77
SHANK1-204ENST00000391814 RRP7AQ9Y3A4 280 aaKnown RBP19.87■□□□□ 0.77
SHANK1-204ENST00000391814 NLRP13Q86W25 1043 aa19.87■□□□□ 0.77
SHANK1-204ENST00000391814 MTERF4Q7Z6M4 381 aaKnown RBP19.87■□□□□ 0.77
SHANK1-204ENST00000391814 IFT57Q9NWB7 429 aa19.87■□□□□ 0.77
SHANK1-204ENST00000391814 CCDC34Q96HJ3 373 aa19.86■□□□□ 0.77
SHANK1-204ENST00000391814 CCDC70Q6NSX1 233 aa19.85■□□□□ 0.77
SHANK1-204ENST00000391814 COG6Q9Y2V7 657 aa19.85■□□□□ 0.77
SHANK1-204ENST00000391814 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
SHANK1-204ENST00000391814 WWC1Q8IX03 1113 aa19.84■□□□□ 0.77
SHANK1-204ENST00000391814 PAK3O75914 559 aaPredicted RBP19.84■□□□□ 0.77
SHANK1-204ENST00000391814 MLECQ14165 292 aa19.83■□□□□ 0.77
SHANK1-204ENST00000391814 ATP6V1DQ9Y5K8 247 aa19.83■□□□□ 0.77
SHANK1-204ENST00000391814 PHLDB1Q86UU1 1377 aa19.83■□□□□ 0.77
SHANK1-204ENST00000391814 FBXW7Q969H0 707 aa19.83■□□□□ 0.76
SHANK1-204ENST00000391814 TAF7LQ5H9L4 462 aa19.81■□□□□ 0.76
SHANK1-204ENST00000391814 DHX57Q6P158 1386 aaKnown RBP19.81■□□□□ 0.76
SHANK1-204ENST00000391814 HDGFL2Q7Z4V5 671 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-204ENST00000391814 STK26Q9P289 416 aa19.81■□□□□ 0.76
SHANK1-204ENST00000391814 FAM184AQ8NB25 1140 aa19.81■□□□□ 0.76
SHANK1-204ENST00000391814 CCDC66A2RUB6 948 aa19.8■□□□□ 0.76
SHANK1-204ENST00000391814 TSR1Q2NL82 804 aaKnown RBP19.8■□□□□ 0.76
SHANK1-204ENST00000391814 L3MBTL2Q969R5 705 aa19.8■□□□□ 0.76
SHANK1-204ENST00000391814 ARGLU1Q9NWB6 273 aaPredicted RBP19.8■□□□□ 0.76
SHANK1-204ENST00000391814 FRAT2O75474 233 aaPredicted RBP19.8■□□□□ 0.76
SHANK1-204ENST00000391814 STK31Q9BXU1 1019 aa19.79■□□□□ 0.76
SHANK1-204ENST00000391814 TRAK2O60296 914 aa19.79■□□□□ 0.76
SHANK1-204ENST00000391814 DIAPH3Q9NSV4 1193 aa19.79■□□□□ 0.76
SHANK1-204ENST00000391814 KANK1Q14678 1352 aa19.78■□□□□ 0.76
SHANK1-204ENST00000391814 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
SHANK1-204ENST00000391814 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
SHANK1-204ENST00000391814 MNS1Q8NEH6 495 aa19.78■□□□□ 0.76
SHANK1-204ENST00000391814 CWC15Q9P013 229 aaKnown RBP19.77■□□□□ 0.76
SHANK1-204ENST00000391814 TPM1P09493 284 aa19.77■□□□□ 0.76
SHANK1-204ENST00000391814 GORABQ5T7V8 394 aa19.76■□□□□ 0.75
SHANK1-204ENST00000391814 RNF214Q8ND24 703 aa19.75■□□□□ 0.75
SHANK1-204ENST00000391814 C22orf23Q9BZE7 217 aa19.74■□□□□ 0.75
SHANK1-204ENST00000391814 CCDC173Q0VFZ6 552 aa19.74■□□□□ 0.75
SHANK1-204ENST00000391814 ZKSCAN2Q63HK3 967 aa19.74■□□□□ 0.75
SHANK1-204ENST00000391814 AK7Q96M32 723 aa19.74■□□□□ 0.75
SHANK1-204ENST00000391814 KRI1Q8N9T8 703 aaKnown RBP19.74■□□□□ 0.75
SHANK1-204ENST00000391814 KIF3AQ9Y496 699 aa19.74■□□□□ 0.75
SHANK1-204ENST00000391814 E9PSI1 815 aa19.73■□□□□ 0.75
SHANK1-204ENST00000391814 BICD2Q8TD16 824 aa19.73■□□□□ 0.75
SHANK1-204ENST00000391814 SASS6Q6UVJ0 657 aa19.73■□□□□ 0.75
SHANK1-204ENST00000391814 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
SHANK1-204ENST00000391814 UQCRHLA0A096LP55 91 aa19.73■□□□□ 0.75
SHANK1-204ENST00000391814 UQCRHP07919 91 aa19.73■□□□□ 0.75
SHANK1-204ENST00000391814 EIF3AQ14152 1382 aaKnown RBP19.73■□□□□ 0.75
SHANK1-204ENST00000391814 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
SHANK1-204ENST00000391814 CEP89Q96ST8 783 aa19.73■□□□□ 0.75
SHANK1-204ENST00000391814 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
SHANK1-204ENST00000391814 ANO2Q9NQ90 1003 aa19.72■□□□□ 0.75
SHANK1-204ENST00000391814 RRP9O43818 475 aaKnown RBP19.71■□□□□ 0.75
SHANK1-204ENST00000391814 RUFY1Q96T51 708 aa19.71■□□□□ 0.75
SHANK1-204ENST00000391814 NUCB2P80303 420 aa19.71■□□□□ 0.75
SHANK1-204ENST00000391814 VPS53Q5VIR6 699 aa19.71■□□□□ 0.75
SHANK1-204ENST00000391814 CAVIN1Q6NZI2 390 aaKnown RBP19.71■□□□□ 0.75
SHANK1-204ENST00000391814 CGNL1Q0VF96 1302 aa19.71■□□□□ 0.75
SHANK1-204ENST00000391814 CCDC9Q9Y3X0 531 aaKnown RBP19.71■□□□□ 0.75
SHANK1-204ENST00000391814 PCMTD1Q96MG8 357 aaPredicted RBP19.7■□□□□ 0.74
SHANK1-204ENST00000391814 PANK3Q9H999 370 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms