RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 EMILIN3Q9NT22 766 aa6.07□□□□□ -1.44
RNU6-239P-201ENST00000390990 KIAA1468Q9P260 1216 aa6.07□□□□□ -1.44
RNU6-239P-201ENST00000390990 KCNC4Q03721 635 aa6.06□□□□□ -1.44
RNU6-239P-201ENST00000390990 LAPTM4BQ86VI4 370 aa6.06□□□□□ -1.44
RNU6-239P-201ENST00000390990 ZFRQ96KR1 1074 aaKnown RBP6.06□□□□□ -1.44
RNU6-239P-201ENST00000390990 DDX27Q96GQ7 796 aaKnown RBP6.05□□□□□ -1.44
RNU6-239P-201ENST00000390990 SEPT9Q9UHD8 586 aaPredicted RBP6.05□□□□□ -1.44
RNU6-239P-201ENST00000390990 NYAP1Q6ZVC0 841 aa6.04□□□□□ -1.44
RNU6-239P-201ENST00000390990 RYDENQ9NUL5 291 aaKnown RBP6.04□□□□□ -1.44
RNU6-239P-201ENST00000390990 MFSD10Q14728 455 aa6.03□□□□□ -1.44
RNU6-239P-201ENST00000390990 TYW1BQ6NUM6 668 aa6.03□□□□□ -1.44
RNU6-239P-201ENST00000390990 GTPBP6O43824 516 aaPredicted RBP6.02□□□□□ -1.45
RNU6-239P-201ENST00000390990 PHF14O94880 888 aa6.02□□□□□ -1.45
RNU6-239P-201ENST00000390990 FBXW7Q969H0 707 aa6.02□□□□□ -1.45
RNU6-239P-201ENST00000390990 ONECUT3O60422 494 aaPredicted RBP6.01□□□□□ -1.45
RNU6-239P-201ENST00000390990 GFRA3O60609 400 aa6.01□□□□□ -1.45
RNU6-239P-201ENST00000390990 C6orf132Q5T0Z8 1188 aa6.01□□□□□ -1.45
RNU6-239P-201ENST00000390990 TRAF7Q6Q0C0 670 aa6.01□□□□□ -1.45
RNU6-239P-201ENST00000390990 LAPTM4AQ15012 233 aa6□□□□□ -1.45
RNU6-239P-201ENST00000390990 TSR3Q9UJK0 312 aaKnown RBP6□□□□□ -1.45
RNU6-239P-201ENST00000390990 TRIM6-TRIM34B2RNG4 842 aa5.99□□□□□ -1.45
RNU6-239P-201ENST00000390990 FAM98CQ17RN3 349 aaKnown RBP5.99□□□□□ -1.45
RNU6-239P-201ENST00000390990 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.99□□□□□ -1.45
RNU6-239P-201ENST00000390990 HPS5Q9UPZ3 1129 aa5.99□□□□□ -1.45
RNU6-239P-201ENST00000390990 CADPS2Q86UW7 1296 aa5.97□□□□□ -1.45
RNU6-239P-201ENST00000390990 LRCH3Q96II8 777 aa5.97□□□□□ -1.45
RNU6-239P-201ENST00000390990 TJAP1Q5JTD0 557 aa5.96□□□□□ -1.46
RNU6-239P-201ENST00000390990 RBM33Q96EV2 1170 aaKnown RBP5.96□□□□□ -1.46
RNU6-239P-201ENST00000390990 EPAS1Q99814 870 aa5.96□□□□□ -1.46
RNU6-239P-201ENST00000390990 PRKD2Q9BZL6 878 aa5.96□□□□□ -1.46
RNU6-239P-201ENST00000390990 NRG2O14511 850 aaPredicted RBP5.94□□□□□ -1.46
RNU6-239P-201ENST00000390990 DPYSL4O14531 572 aa5.94□□□□□ -1.46
RNU6-239P-201ENST00000390990 TSKSQ9UJT2 592 aa5.94□□□□□ -1.46
RNU6-239P-201ENST00000390990 PPP4CP60510 307 aa5.93□□□□□ -1.46
RNU6-239P-201ENST00000390990 CAMK2BQ13554 666 aa5.93□□□□□ -1.46
RNU6-239P-201ENST00000390990 DDX12PQ92771 950 aa5.93□□□□□ -1.46
RNU6-239P-201ENST00000390990 TSR1Q2NL82 804 aaKnown RBP5.92□□□□□ -1.46
RNU6-239P-201ENST00000390990 PPP1R18Q6NYC8 613 aa5.92□□□□□ -1.46
RNU6-239P-201ENST00000390990 SMAPO00193 183 aa5.91□□□□□ -1.46
RNU6-239P-201ENST00000390990 SAMD7Q7Z3H4 446 aa5.91□□□□□ -1.46
RNU6-239P-201ENST00000390990 PACS2Q86VP3 889 aa5.91□□□□□ -1.46
RNU6-239P-201ENST00000390990 ZNF516Q92618 1163 aa5.91□□□□□ -1.46
RNU6-239P-201ENST00000390990 MTRQ99707 1265 aa5.91□□□□□ -1.46
RNU6-239P-201ENST00000390990 C3orf80F5H4A9 247 aa5.9□□□□□ -1.46
RNU6-239P-201ENST00000390990 ZNF787Q6DD87 383 aa5.9□□□□□ -1.46
RNU6-239P-201ENST00000390990 FAM198AQ9UFP1 575 aa5.9□□□□□ -1.46
RNU6-239P-201ENST00000390990 V9GY48 417 aaPredicted RBP5.9□□□□□ -1.46
RNU6-239P-201ENST00000390990 EN1Q05925 392 aaPredicted RBP5.89□□□□□ -1.47
RNU6-239P-201ENST00000390990 IL21Q9HBE4 155 aa5.89□□□□□ -1.47
RNU6-239P-201ENST00000390990 MAP3K7O43318 606 aa5.88□□□□□ -1.47
RNU6-239P-201ENST00000390990 NKX2-3Q8TAU0 364 aa5.88□□□□□ -1.47
RNU6-239P-201ENST00000390990 ZNF775Q96BV0 537 aaPredicted RBP5.88□□□□□ -1.47
RNU6-239P-201ENST00000390990 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.88□□□□□ -1.47
RNU6-239P-201ENST00000390990 NBR1Q14596 966 aa5.87□□□□□ -1.47
RNU6-239P-201ENST00000390990 CDCA7LQ96GN5 454 aa5.87□□□□□ -1.47
RNU6-239P-201ENST00000390990 PDZRN3Q9UPQ7 1066 aa5.87□□□□□ -1.47
RNU6-239P-201ENST00000390990 APLP1P51693 650 aa5.86□□□□□ -1.47
RNU6-239P-201ENST00000390990 PRSS12P56730 875 aa5.86□□□□□ -1.47
RNU6-239P-201ENST00000390990 PRIM1P49642 420 aaKnown RBP5.85□□□□□ -1.47
RNU6-239P-201ENST00000390990 TATDN2Q93075 761 aa5.84□□□□□ -1.47
RNU6-239P-201ENST00000390990 PNMA3Q9UL41 463 aa5.84□□□□□ -1.47
RNU6-239P-201ENST00000390990 PDIA6Q15084 440 aa5.82□□□□□ -1.48
RNU6-239P-201ENST00000390990 TRIM67Q6ZTA4 783 aa5.82□□□□□ -1.48
RNU6-239P-201ENST00000390990 RNF40O75150 1001 aa5.81□□□□□ -1.48
RNU6-239P-201ENST00000390990 COPS2P61201 443 aa5.81□□□□□ -1.48
RNU6-239P-201ENST00000390990 NUDT18Q6ZVK8 323 aa5.81□□□□□ -1.48
RNU6-239P-201ENST00000390990 POTECB2RU33 542 aa5.8□□□□□ -1.48
RNU6-239P-201ENST00000390990 NBPF26B4DH59 902 aa5.8□□□□□ -1.48
RNU6-239P-201ENST00000390990 EMID1Q96A84 441 aaPredicted RBP5.8□□□□□ -1.48
RNU6-239P-201ENST00000390990 CERKQ8TCT0 537 aa5.79□□□□□ -1.48
RNU6-239P-201ENST00000390990 CDHR5Q9HBB8 845 aa5.79□□□□□ -1.48
RNU6-239P-201ENST00000390990 GRXCR2A6NFK2 248 aa5.78□□□□□ -1.48
RNU6-239P-201ENST00000390990 SPDYE16A6NNV3 312 aaPredicted RBP5.78□□□□□ -1.48
RNU6-239P-201ENST00000390990 GGCXP38435 758 aa5.78□□□□□ -1.48
RNU6-239P-201ENST00000390990 HDGFP51858 240 aaKnown RBP5.78□□□□□ -1.48
RNU6-239P-201ENST00000390990 SWT1Q5T5J6 900 aaKnown RBP5.78□□□□□ -1.48
RNU6-239P-201ENST00000390990 TMUB1Q9BVT8 246 aa5.78□□□□□ -1.48
RNU6-239P-201ENST00000390990 ZPR1O75312 459 aa5.77□□□□□ -1.49
RNU6-239P-201ENST00000390990 DCAF8L2P0C7V8 631 aa5.77□□□□□ -1.49
RNU6-239P-201ENST00000390990 MYT1Q01538 1121 aa5.77□□□□□ -1.49
RNU6-239P-201ENST00000390990 RNF223E7ERA6 249 aa5.76□□□□□ -1.49
RNU6-239P-201ENST00000390990 OSBPP22059 807 aa5.76□□□□□ -1.49
RNU6-239P-201ENST00000390990 SLC19A1P41440 591 aa5.75□□□□□ -1.49
RNU6-239P-201ENST00000390990 TTC13Q8NBP0 860 aa5.75□□□□□ -1.49
RNU6-239P-201ENST00000390990 PKDCCQ504Y2 493 aa5.74□□□□□ -1.49
RNU6-239P-201ENST00000390990 SPRYD7Q5W111 196 aa5.74□□□□□ -1.49
RNU6-239P-201ENST00000390990 RBM27Q9P2N5 1060 aaKnown RBP5.74□□□□□ -1.49
RNU6-239P-201ENST00000390990 DGAT1O75907 488 aa5.73□□□□□ -1.49
RNU6-239P-201ENST00000390990 PADI6Q6TGC4 694 aa5.73□□□□□ -1.49
RNU6-239P-201ENST00000390990 SLF2Q8IX21 1173 aa5.73□□□□□ -1.49
RNU6-239P-201ENST00000390990 NPDC1Q9NQX5 325 aaPredicted RBP5.73□□□□□ -1.49
RNU6-239P-201ENST00000390990 PPEF1O14829 653 aaPredicted RBP5.72□□□□□ -1.49
RNU6-239P-201ENST00000390990 LCE2AQ5TA79 106 aaPredicted RBP5.72□□□□□ -1.49
RNU6-239P-201ENST00000390990 BLOC1S3Q6QNY0 202 aa5.72□□□□□ -1.49
RNU6-239P-201ENST00000390990 LIAT1Q6ZQX7 453 aa5.72□□□□□ -1.49
RNU6-239P-201ENST00000390990 ZNF598Q86UK7 904 aaKnown RBP5.72□□□□□ -1.49
RNU6-239P-201ENST00000390990 NECTIN2Q92692 538 aa5.72□□□□□ -1.49
RNU6-239P-201ENST00000390990 PCDHB3Q9Y5E6 796 aa5.72□□□□□ -1.49
RNU6-239P-201ENST00000390990 TLL1O43897 1013 aa5.71□□□□□ -1.5
RNU6-239P-201ENST00000390990 PRR20EP86478 221 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms