RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 BEGAINQ9BUH8 593 aa2.74□□□□□ -1.97
TRAJ39-201ENST00000390498 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.74□□□□□ -1.97
TRAJ39-201ENST00000390498 ATP1B4Q9UN42 357 aaPredicted RBP2.74□□□□□ -1.97
TRAJ39-201ENST00000390498 SOCS7O14512 581 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 KIF3CO14782 793 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 TBC1D12O60347 775 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 BRD1O95696 1058 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 TIE1P35590 1138 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 MDM2Q00987 491 aaPredicted RBP2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 KCNA1Q09470 495 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 DIXDC1Q155Q3 683 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 DDX12PQ92771 950 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 PRM3Q9NNZ6 103 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 POLR3EQ9NVU0 708 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 ZRANB1Q9UGI0 708 aa2.73□□□□□ -1.97
TRAJ39-201ENST00000390498 LOC105371045A0A1W2PR82 267 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 C2orf72A6NCS6 295 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 E9PSI1 815 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 RFC5P40937 340 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 RBM25P49756 843 aaKnown RBP2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 CLK2P49760 499 aaKnown RBP2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 FOXD4L5Q5VV16 416 aaPredicted RBP2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 MYSM1Q5VVJ2 828 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 PPP2R2DQ66LE6 453 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 POTEDQ86YR6 584 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 FOXD4L4Q8WXT5 416 aaPredicted RBP2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 CALR3Q96L12 384 aaKnown RBP2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 TMEM121BQ9BXQ6 578 aaPredicted RBP2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 SNRKQ9NRH2 765 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 FAM217BQ9NTX9 383 aaPredicted RBP2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 USTQ9Y2C2 406 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 AMOTL2Q9Y2J4 779 aa2.72□□□□□ -1.97
TRAJ39-201ENST00000390498 TTLL13PA6NNM8 815 aa2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 EVI5O60447 810 aa2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 OATP04181 439 aa2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 CD44P16070 742 aaKnown RBP2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 PRIM1P49642 420 aaKnown RBP2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 TUSC1Q2TAM9 212 aa2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 DPY19L2Q6NUT2 758 aa2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 UPF1Q92900 1129 aaKnown RBP eCLIP2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 PHF12Q96QT6 1004 aa2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 PHOX2BQ99453 314 aa2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 EPAS1Q99814 870 aa2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 NPDC1Q9NQX5 325 aaPredicted RBP2.71□□□□□ -1.98
TRAJ39-201ENST00000390498 G3V3G9 751 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 IGSF3O75054 1194 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 CSB-PGBD3P0DP91 1061 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 EN1Q05925 392 aaPredicted RBP2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 MTMR14Q8NCE2 650 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 GLMNQ92990 594 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 PBXIP1Q96AQ6 731 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 MS4A3Q96HJ5 214 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 TBC1D2Q9BYX2 928 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 GDPD2Q9HCC8 539 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 ANO8Q9HCE9 1232 aaPredicted RBP2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 TRPC6Q9Y210 931 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 BOLA1Q9Y3E2 137 aa2.7□□□□□ -1.98
TRAJ39-201ENST00000390498 PHF14O94880 888 aa2.69□□□□□ -1.98
TRAJ39-201ENST00000390498 HMGB1P09429 215 aaKnown RBP2.69□□□□□ -1.98
TRAJ39-201ENST00000390498 ABL2P42684 1182 aa2.69□□□□□ -1.98
TRAJ39-201ENST00000390498 METTL3Q86U44 580 aaKnown RBP2.69□□□□□ -1.98
TRAJ39-201ENST00000390498 ZNF428Q96B54 188 aa2.69□□□□□ -1.98
TRAJ39-201ENST00000390498 TRIM35Q9UPQ4 493 aa2.69□□□□□ -1.98
TRAJ39-201ENST00000390498 POM121CA8CG34 1229 aa2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 MAP3K7O43318 606 aa2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 GJA5P36382 358 aa2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 CCDC27Q2M243 656 aa2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 RIC3Q7Z5B4 369 aa2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 PDCD7Q8N8D1 485 aaKnown RBP2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 CERKQ8TCT0 537 aa2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 PXYLP1Q8TE99 480 aa2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 PTCD2Q8WV60 388 aaKnown RBP2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 CDHR5Q9HBB8 845 aa2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 BMP2KQ9NSY1 1161 aaPredicted RBP2.68□□□□□ -1.98
TRAJ39-201ENST00000390498 SPTLC1O15269 473 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 SRPK2P78362 688 aaKnown RBP2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 WASHC4Q2M389 1173 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 CFAP70Q5T0N1 1121 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 HDGFL1Q5TGJ6 251 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 FBXO31Q5XUX0 539 aaPredicted RBP2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 TYW1BQ6NUM6 668 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 SND1Q7KZF4 910 aaKnown RBP eCLIP2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 PIP4P2Q8N4L2 257 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 L3MBTL3Q96JM7 780 aaPredicted RBP2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 OCEL1Q9H607 264 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 RBM27Q9P2N5 1060 aaKnown RBP2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 LIMD1Q9UGP4 676 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 TBC1D2BQ9UPU7 963 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 ADGRG1Q9Y653 693 aa2.67□□□□□ -1.98
TRAJ39-201ENST00000390498 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 SLC34A2O95436 690 aa2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 IRX5P78411 483 aaPredicted RBP2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 IER5LQ5T953 404 aa2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 RSBN1LQ6PCB5 846 aaPredicted RBP2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 ZNF710Q8N1W2 664 aa2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 TTC13Q8NBP0 860 aa2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 SLAIN1Q8ND83 568 aa2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 SPIRE2Q8WWL2 714 aa2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 RBM33Q96EV2 1170 aaKnown RBP2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 PPP1R12CQ9BZL4 782 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms