RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 APLP2Q06481 763 aa13.1□□□□□ -0.31
TRBV6-1-201ENST00000390353 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
TRBV6-1-201ENST00000390353 LRRC9Q6ZRR7 1453 aa13.1□□□□□ -0.31
TRBV6-1-201ENST00000390353 ARHGEF5Q12774 1597 aa13.09□□□□□ -0.31
TRBV6-1-201ENST00000390353 LTBP4Q8N2S1 1624 aa13.09□□□□□ -0.31
TRBV6-1-201ENST00000390353 MYO3AQ8NEV4 1616 aa13.09□□□□□ -0.31
TRBV6-1-201ENST00000390353 PZPP20742 1482 aa13.09□□□□□ -0.31
TRBV6-1-201ENST00000390353 MAP3K1Q13233 1512 aa13.08□□□□□ -0.31
TRBV6-1-201ENST00000390353 MIA2Q96PC5 1412 aa13.08□□□□□ -0.32
TRBV6-1-201ENST00000390353 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
TRBV6-1-201ENST00000390353 ZNF142P52746 1687 aaPredicted RBP13.08□□□□□ -0.32
TRBV6-1-201ENST00000390353 ANKLE2Q86XL3 938 aa13.07□□□□□ -0.32
TRBV6-1-201ENST00000390353 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
TRBV6-1-201ENST00000390353 ZNF335Q9H4Z2 1342 aaPredicted RBP13.06□□□□□ -0.32
TRBV6-1-201ENST00000390353 DISP3Q9P2K9 1392 aa13.06□□□□□ -0.32
TRBV6-1-201ENST00000390353 MYOM3Q5VTT5 1437 aa13.05□□□□□ -0.32
TRBV6-1-201ENST00000390353 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
TRBV6-1-201ENST00000390353 LOC105371045A0A1W2PR82 267 aa13.04□□□□□ -0.32
TRBV6-1-201ENST00000390353 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
TRBV6-1-201ENST00000390353 KANK4Q5T7N3 995 aaPredicted RBP13.01□□□□□ -0.33
TRBV6-1-201ENST00000390353 MAST1Q9Y2H9 1570 aa13.01□□□□□ -0.33
TRBV6-1-201ENST00000390353 DNMT1P26358 1616 aaKnown RBP13.01□□□□□ -0.33
TRBV6-1-201ENST00000390353 CPS1P31327 1500 aa13□□□□□ -0.33
TRBV6-1-201ENST00000390353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13□□□□□ -0.33
TRBV6-1-201ENST00000390353 TOM1O60784 492 aa13□□□□□ -0.33
TRBV6-1-201ENST00000390353 UGGT1Q9NYU2 1555 aa12.99□□□□□ -0.33
TRBV6-1-201ENST00000390353 DUOX2Q9NRD8 1548 aa12.98□□□□□ -0.33
TRBV6-1-201ENST00000390353 EIF2AK4Q9P2K8 1649 aaKnown RBP12.98□□□□□ -0.33
TRBV6-1-201ENST00000390353 ABCC3O15438 1527 aa12.98□□□□□ -0.33
TRBV6-1-201ENST00000390353 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
TRBV6-1-201ENST00000390353 NPHP4O75161 1426 aaPredicted RBP12.97□□□□□ -0.33
TRBV6-1-201ENST00000390353 ERBINQ96RT1 1412 aa12.97□□□□□ -0.33
TRBV6-1-201ENST00000390353 KANK1Q14678 1352 aa12.97□□□□□ -0.33
TRBV6-1-201ENST00000390353 KIF15Q9NS87 1388 aa12.97□□□□□ -0.33
TRBV6-1-201ENST00000390353 RNF17Q9BXT8 1623 aaKnown RBP12.97□□□□□ -0.33
TRBV6-1-201ENST00000390353 ZC3H13Q5T200 1668 aaKnown RBP12.96□□□□□ -0.33
TRBV6-1-201ENST00000390353 MED14O60244 1454 aa12.96□□□□□ -0.34
TRBV6-1-201ENST00000390353 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
TRBV6-1-201ENST00000390353 ERVK-7P63135 1459 aa12.94□□□□□ -0.34
TRBV6-1-201ENST00000390353 RRP7BPQ9NSQ0 103 aa12.94□□□□□ -0.34
TRBV6-1-201ENST00000390353 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
TRBV6-1-201ENST00000390353 SPATA31D1Q6ZQQ2 1576 aa12.94□□□□□ -0.34
TRBV6-1-201ENST00000390353 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
TRBV6-1-201ENST00000390353 SOCS7O14512 581 aa12.93□□□□□ -0.34
TRBV6-1-201ENST00000390353 EID1Q9Y6B2 187 aa12.93□□□□□ -0.34
TRBV6-1-201ENST00000390353 DEPDC5O75140 1603 aa12.92□□□□□ -0.34
TRBV6-1-201ENST00000390353 ABCC5O15440 1437 aa12.92□□□□□ -0.34
TRBV6-1-201ENST00000390353 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
TRBV6-1-201ENST00000390353 DAPK1P53355 1430 aa12.91□□□□□ -0.34
TRBV6-1-201ENST00000390353 FGD6Q6ZV73 1430 aa12.91□□□□□ -0.34
TRBV6-1-201ENST00000390353 PIP4K2BP78356 416 aa12.91□□□□□ -0.34
TRBV6-1-201ENST00000390353 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
TRBV6-1-201ENST00000390353 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
TRBV6-1-201ENST00000390353 PRDM15P57071 1507 aaPredicted RBP12.9□□□□□ -0.34
TRBV6-1-201ENST00000390353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRBV6-1-201ENST00000390353 SCAF11Q99590 1463 aaKnown RBP12.89□□□□□ -0.35
TRBV6-1-201ENST00000390353 PTPN23Q9H3S7 1636 aa12.88□□□□□ -0.35
TRBV6-1-201ENST00000390353 ILDR2Q71H61 639 aa12.88□□□□□ -0.35
TRBV6-1-201ENST00000390353 TXNDC2Q86VQ3 553 aa12.88□□□□□ -0.35
TRBV6-1-201ENST00000390353 MROH1Q8NDA8 1641 aa12.88□□□□□ -0.35
TRBV6-1-201ENST00000390353 VWDEQ8N2E2 1590 aa12.87□□□□□ -0.35
TRBV6-1-201ENST00000390353 HSPA1LP34931 641 aa12.87□□□□□ -0.35
TRBV6-1-201ENST00000390353 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
TRBV6-1-201ENST00000390353 FAM50AQ14320 339 aaKnown RBP12.85□□□□□ -0.35
TRBV6-1-201ENST00000390353 SLC52A1Q9NWF4 448 aa12.85□□□□□ -0.35
TRBV6-1-201ENST00000390353 CHIC2Q9UKJ5 165 aa12.85□□□□□ -0.35
TRBV6-1-201ENST00000390353 ARHGAP23Q9P227 1491 aa12.85□□□□□ -0.35
TRBV6-1-201ENST00000390353 TMEM2Q9UHN6 1383 aa12.84□□□□□ -0.35
TRBV6-1-201ENST00000390353 SLIT1O75093 1534 aa12.84□□□□□ -0.35
TRBV6-1-201ENST00000390353 LMTK2Q8IWU2 1503 aa12.83□□□□□ -0.35
TRBV6-1-201ENST00000390353 HDGFP51858 240 aaKnown RBP12.83□□□□□ -0.36
TRBV6-1-201ENST00000390353 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.36
TRBV6-1-201ENST00000390353 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.36
TRBV6-1-201ENST00000390353 SYNMO15061 1565 aa12.82□□□□□ -0.36
TRBV6-1-201ENST00000390353 LTKP29376 864 aa12.82□□□□□ -0.36
TRBV6-1-201ENST00000390353 ADGRL2O95490 1459 aa12.81□□□□□ -0.36
TRBV6-1-201ENST00000390353 ANKRD50Q9ULJ7 1429 aa12.8□□□□□ -0.36
TRBV6-1-201ENST00000390353 RPRD2Q5VT52 1461 aaKnown RBP12.8□□□□□ -0.36
TRBV6-1-201ENST00000390353 CEP152O94986 1710 aa12.8□□□□□ -0.36
TRBV6-1-201ENST00000390353 EFCAB6Q5THR3 1501 aa12.8□□□□□ -0.36
TRBV6-1-201ENST00000390353 IDI1Q13907 227 aa12.8□□□□□ -0.36
TRBV6-1-201ENST00000390353 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
TRBV6-1-201ENST00000390353 UBR1Q8IWV7 1749 aa12.79□□□□□ -0.36
TRBV6-1-201ENST00000390353 KCNA6P17658 529 aa12.78□□□□□ -0.36
TRBV6-1-201ENST00000390353 BCANQ96GW7 911 aa12.78□□□□□ -0.36
TRBV6-1-201ENST00000390353 NOS1P29475 1434 aa12.78□□□□□ -0.36
TRBV6-1-201ENST00000390353 KDM5AP29375 1690 aaKnown RBP12.77□□□□□ -0.37
TRBV6-1-201ENST00000390353 PPP1R15AO75807 674 aaPredicted RBP12.76□□□□□ -0.37
TRBV6-1-201ENST00000390353 PIK3C2BO00750 1634 aa12.75□□□□□ -0.37
TRBV6-1-201ENST00000390353 ROCK1Q13464 1354 aa12.75□□□□□ -0.37
TRBV6-1-201ENST00000390353 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRBV6-1-201ENST00000390353 MED1Q15648 1581 aaPredicted RBP12.74□□□□□ -0.37
TRBV6-1-201ENST00000390353 TMEM94Q12767 1356 aa12.74□□□□□ -0.37
TRBV6-1-201ENST00000390353 PROSER2Q86WR7 435 aaPredicted RBP12.74□□□□□ -0.37
TRBV6-1-201ENST00000390353 ADGRB3O60242 1522 aa12.73□□□□□ -0.37
TRBV6-1-201ENST00000390353 SLC26A8Q96RN1 970 aa12.73□□□□□ -0.37
TRBV6-1-201ENST00000390353 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
TRBV6-1-201ENST00000390353 FAM135BQ49AJ0 1406 aa12.72□□□□□ -0.37
TRBV6-1-201ENST00000390353 MSH6P52701 1360 aa12.71□□□□□ -0.37
TRBV6-1-201ENST00000390353 PLEKHG1Q9ULL1 1385 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms