RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 POLR1AO95602 1720 aaPredicted RBP25.52■■□□□ 1.68
ACTN4-202ENST00000390009 ANP32CO43423 234 aa25.51■■□□□ 1.67
ACTN4-202ENST00000390009 DEPDC5O75140 1603 aa25.51■■□□□ 1.67
ACTN4-202ENST00000390009 CFAP74Q9C0B2 1584 aa25.51■■□□□ 1.67
ACTN4-202ENST00000390009 CD109Q6YHK3 1445 aa25.49■■□□□ 1.67
ACTN4-202ENST00000390009 RALGAPBQ86X10 1494 aa25.49■■□□□ 1.67
ACTN4-202ENST00000390009 ATP10AO60312 1499 aa25.49■■□□□ 1.67
ACTN4-202ENST00000390009 CCDC7Q96M83 1385 aa25.46■■□□□ 1.67
ACTN4-202ENST00000390009 KIDINS220Q9ULH0 1771 aa25.46■■□□□ 1.67
ACTN4-202ENST00000390009 KDM5CP41229 1560 aa25.46■■□□□ 1.67
ACTN4-202ENST00000390009 C11orf95C9JLR9 678 aaPredicted RBP25.45■■□□□ 1.66
ACTN4-202ENST00000390009 DCAF11Q8TEB1 546 aa25.45■■□□□ 1.66
ACTN4-202ENST00000390009 ZNF518AQ6AHZ1 1483 aa25.45■■□□□ 1.66
ACTN4-202ENST00000390009 EIF2AK4Q9P2K8 1649 aaKnown RBP25.45■■□□□ 1.66
ACTN4-202ENST00000390009 E9PCH4 1651 aa25.45■■□□□ 1.66
ACTN4-202ENST00000390009 MYT1LQ9UL68 1186 aa25.45■■□□□ 1.66
ACTN4-202ENST00000390009 USP47Q96K76 1375 aa25.44■■□□□ 1.66
ACTN4-202ENST00000390009 KDM2AQ9Y2K7 1162 aa25.43■■□□□ 1.66
ACTN4-202ENST00000390009 CCER2I3L3R5 266 aa25.42■■□□□ 1.66
ACTN4-202ENST00000390009 GTF3C3Q9Y5Q9 886 aa25.42■■□□□ 1.66
ACTN4-202ENST00000390009 DHX29Q7Z478 1369 aaKnown RBP25.41■■□□□ 1.66
ACTN4-202ENST00000390009 CNTLNQ9NXG0 1405 aa25.4■■□□□ 1.66
ACTN4-202ENST00000390009 TET3O43151 1660 aa25.4■■□□□ 1.66
ACTN4-202ENST00000390009 VWDEQ8N2E2 1590 aa25.39■■□□□ 1.66
ACTN4-202ENST00000390009 A2MP01023 1474 aa25.38■■□□□ 1.65
ACTN4-202ENST00000390009 POGZQ7Z3K3 1410 aa25.38■■□□□ 1.65
ACTN4-202ENST00000390009 BCORL1Q5H9F3 1711 aa25.38■■□□□ 1.65
ACTN4-202ENST00000390009 KIF7Q2M1P5 1343 aa25.37■■□□□ 1.65
ACTN4-202ENST00000390009 PRDM15P57071 1507 aaPredicted RBP25.37■■□□□ 1.65
ACTN4-202ENST00000390009 SPHKAPQ2M3C7 1700 aa25.37■■□□□ 1.65
ACTN4-202ENST00000390009 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
ACTN4-202ENST00000390009 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
ACTN4-202ENST00000390009 TRPM1Q7Z4N2 1603 aa25.37■■□□□ 1.65
ACTN4-202ENST00000390009 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
ACTN4-202ENST00000390009 KIF3BO15066 747 aa25.36■■□□□ 1.65
ACTN4-202ENST00000390009 RGL3Q3MIN7 710 aa25.36■■□□□ 1.65
ACTN4-202ENST00000390009 PRAG1Q86YV5 1406 aa25.36■■□□□ 1.65
ACTN4-202ENST00000390009 MROH1Q8NDA8 1641 aa25.36■■□□□ 1.65
ACTN4-202ENST00000390009 KANK1Q14678 1352 aa25.36■■□□□ 1.65
ACTN4-202ENST00000390009 CARD11Q9BXL7 1154 aa25.36■■□□□ 1.65
ACTN4-202ENST00000390009 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
ACTN4-202ENST00000390009 TRPM2O94759 1503 aa25.34■■□□□ 1.65
ACTN4-202ENST00000390009 NEO1Q92859 1461 aa25.33■■□□□ 1.64
ACTN4-202ENST00000390009 HECW2Q9P2P5 1572 aa25.33■■□□□ 1.64
ACTN4-202ENST00000390009 MLH3Q9UHC1 1453 aa25.32■■□□□ 1.64
ACTN4-202ENST00000390009 CEP152O94986 1710 aa25.3■■□□□ 1.64
ACTN4-202ENST00000390009 ROCK2O75116 1388 aaKnown RBP25.3■■□□□ 1.64
ACTN4-202ENST00000390009 PTPRTO14522 1441 aa25.3■■□□□ 1.64
ACTN4-202ENST00000390009 MAP3K4Q9Y6R4 1608 aa25.3■■□□□ 1.64
ACTN4-202ENST00000390009 CLTCL1P53675 1640 aa25.27■■□□□ 1.64
ACTN4-202ENST00000390009 RNF17Q9BXT8 1623 aaKnown RBP25.27■■□□□ 1.64
ACTN4-202ENST00000390009 ARID4BQ4LE39 1312 aaPredicted RBP25.25■■□□□ 1.63
ACTN4-202ENST00000390009 FRMPD1Q5SYB0 1578 aa25.25■■□□□ 1.63
ACTN4-202ENST00000390009 ABCA6Q8N139 1617 aa25.24■■□□□ 1.63
ACTN4-202ENST00000390009 LAMC1P11047 1609 aa25.24■■□□□ 1.63
ACTN4-202ENST00000390009 GLI2P10070 1586 aa25.24■■□□□ 1.63
ACTN4-202ENST00000390009 EFCAB6Q5THR3 1501 aa25.23■■□□□ 1.63
ACTN4-202ENST00000390009 GPRASP1Q5JY77 1395 aa25.22■■□□□ 1.63
ACTN4-202ENST00000390009 ST20-MTHFSA0A0A6YYL1 179 aa25.21■■□□□ 1.63
ACTN4-202ENST00000390009 RICTORQ6R327 1708 aa25.21■■□□□ 1.63
ACTN4-202ENST00000390009 PPRC1Q5VV67 1664 aaKnown RBP25.21■■□□□ 1.63
ACTN4-202ENST00000390009 LMTK2Q8IWU2 1503 aa25.2■■□□□ 1.63
ACTN4-202ENST00000390009 NBPF1Q3BBV0 1214 aa25.19■■□□□ 1.62
ACTN4-202ENST00000390009 RAPGEF3O95398 923 aa25.18■■□□□ 1.62
ACTN4-202ENST00000390009 PRKRIP1Q9H875 184 aaPredicted RBP25.17■■□□□ 1.62
ACTN4-202ENST00000390009 POLR3GLQ9BT43 218 aa25.16■■□□□ 1.62
ACTN4-202ENST00000390009 MADDQ8WXG6 1647 aa25.16■■□□□ 1.62
ACTN4-202ENST00000390009 NEURL4Q96JN8 1562 aa25.15■■□□□ 1.62
ACTN4-202ENST00000390009 DIP2BQ9P265 1576 aa25.14■■□□□ 1.62
ACTN4-202ENST00000390009 DIP2CQ9Y2E4 1556 aa25.14■■□□□ 1.62
ACTN4-202ENST00000390009 KIF1BO60333 1816 aa25.13■■□□□ 1.61
ACTN4-202ENST00000390009 UGGT1Q9NYU2 1555 aa25.12■■□□□ 1.61
ACTN4-202ENST00000390009 STAC3Q96MF2 364 aa25.1■■□□□ 1.61
ACTN4-202ENST00000390009 GGT6Q6P531 493 aa25.09■■□□□ 1.61
ACTN4-202ENST00000390009 FAM69CQ0P6D2 419 aa25.08■■□□□ 1.61
ACTN4-202ENST00000390009 CFAP65Q6ZU64 1925 aaKnown RBP25.07■■□□□ 1.6
ACTN4-202ENST00000390009 TSPOAP1O95153 1857 aa25.06■■□□□ 1.6
ACTN4-202ENST00000390009 ABCC3O15438 1527 aa25.06■■□□□ 1.6
ACTN4-202ENST00000390009 NPATQ14207 1427 aa25.05■■□□□ 1.6
ACTN4-202ENST00000390009 MROH2AA6NES4 1674 aa25.04■■□□□ 1.6
ACTN4-202ENST00000390009 IQGAP1P46940 1657 aa25.03■■□□□ 1.6
ACTN4-202ENST00000390009 CCDC184Q52MB2 194 aa25.03■■□□□ 1.6
ACTN4-202ENST00000390009 CAMSAP1Q5T5Y3 1602 aa25.03■■□□□ 1.6
ACTN4-202ENST00000390009 IFT172Q9UG01 1749 aa25.03■■□□□ 1.6
ACTN4-202ENST00000390009 YEATS2Q9ULM3 1422 aa25.03■■□□□ 1.6
ACTN4-202ENST00000390009 WASHC2CQ9Y4E1 1318 aa25.02■■□□□ 1.6
ACTN4-202ENST00000390009 KIAA1210Q9ULL0 1709 aa25.02■■□□□ 1.6
ACTN4-202ENST00000390009 COL17A1Q9UMD9 1497 aaPredicted RBP25.01■■□□□ 1.59
ACTN4-202ENST00000390009 TESK2Q96S53 571 aa25■■□□□ 1.59
ACTN4-202ENST00000390009 ZMYM4Q5VZL5 1548 aa25■■□□□ 1.59
ACTN4-202ENST00000390009 MYOM2P54296 1465 aa25■■□□□ 1.59
ACTN4-202ENST00000390009 ADGRB3O60242 1522 aa24.98■■□□□ 1.59
ACTN4-202ENST00000390009 MRS2Q9HD23 443 aa24.98■■□□□ 1.59
ACTN4-202ENST00000390009 ZC3H13Q5T200 1668 aaKnown RBP24.97■■□□□ 1.59
ACTN4-202ENST00000390009 SIGLEC1Q9BZZ2 1709 aa24.96■■□□□ 1.59
ACTN4-202ENST00000390009 DISP3Q9P2K9 1392 aa24.96■■□□□ 1.59
ACTN4-202ENST00000390009 SCAF11Q99590 1463 aaKnown RBP24.94■■□□□ 1.58
ACTN4-202ENST00000390009 HNRNPUQ00839 825 aaKnown RBP eCLIP24.93■■□□□ 1.582e-6■■■■□ 21.2
ACTN4-202ENST00000390009 TMF1P82094 1093 aa24.92■■□□□ 1.58
ACTN4-202ENST00000390009 CNGB1Q14028 1251 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms