RNA–Protein interactions for RNA: ENST00000389680.2

MT-RNR1-201, mitochondrially encoded 12S RNA, humanhuman

BASIC

Gene MT-RNR1, Length 954 nt, Biotype Mt rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-RNR1-201ENST00000389680 ZNF710Q8N1W2 664 aa12.22□□□□□ -0.45
MT-RNR1-201ENST00000389680 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
MT-RNR1-201ENST00000389680 TSR1Q2NL82 804 aaKnown RBP12.2□□□□□ -0.46
MT-RNR1-201ENST00000389680 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
MT-RNR1-201ENST00000389680 KDM4CQ9H3R0 1056 aa12.2□□□□□ -0.46
MT-RNR1-201ENST00000389680 NPDC1Q9NQX5 325 aaPredicted RBP12.2□□□□□ -0.46
MT-RNR1-201ENST00000389680 GPR153Q6NV75 609 aa12.19□□□□□ -0.46
MT-RNR1-201ENST00000389680 ZDHHC16Q969W1 377 aa12.17□□□□□ -0.46
MT-RNR1-201ENST00000389680 DAXXQ9UER7 740 aaPredicted RBP12.17□□□□□ -0.46
MT-RNR1-201ENST00000389680 SNPHO15079 494 aa12.15□□□□□ -0.46
MT-RNR1-201ENST00000389680 AMHR2Q16671 573 aa12.15□□□□□ -0.46
MT-RNR1-201ENST00000389680 C6orf132Q5T0Z8 1188 aa12.14□□□□□ -0.47
MT-RNR1-201ENST00000389680 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
MT-RNR1-201ENST00000389680 IL27Q8NEV9 243 aa12.12□□□□□ -0.47
MT-RNR1-201ENST00000389680 TTLL12Q14166 644 aaPredicted RBP12.11□□□□□ -0.47
MT-RNR1-201ENST00000389680 PARP9Q8IXQ6 854 aa12.11□□□□□ -0.47
MT-RNR1-201ENST00000389680 ADAM33Q9BZ11 813 aa12.11□□□□□ -0.47
MT-RNR1-201ENST00000389680 LHX6Q9UPM6 363 aa12.11□□□□□ -0.47
MT-RNR1-201ENST00000389680 PSDA5PKW4 1024 aaPredicted RBP12.09□□□□□ -0.47
MT-RNR1-201ENST00000389680 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
MT-RNR1-201ENST00000389680 PADI6Q6TGC4 694 aa12.06□□□□□ -0.48
MT-RNR1-201ENST00000389680 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
MT-RNR1-201ENST00000389680 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
MT-RNR1-201ENST00000389680 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
MT-RNR1-201ENST00000389680 ERICH6Q7L0X2 663 aa12.04□□□□□ -0.48
MT-RNR1-201ENST00000389680 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
MT-RNR1-201ENST00000389680 OATP04181 439 aa12.03□□□□□ -0.48
MT-RNR1-201ENST00000389680 GIGYF2Q6Y7W6 1299 aaKnown RBP12.03□□□□□ -0.48
MT-RNR1-201ENST00000389680 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
MT-RNR1-201ENST00000389680 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
MT-RNR1-201ENST00000389680 PRSS12P56730 875 aa12.02□□□□□ -0.49
MT-RNR1-201ENST00000389680 FAM161AQ3B820 660 aa12.02□□□□□ -0.49
MT-RNR1-201ENST00000389680 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.49
MT-RNR1-201ENST00000389680 CLCN1P35523 988 aa12.01□□□□□ -0.49
MT-RNR1-201ENST00000389680 TTC13Q8NBP0 860 aa12.01□□□□□ -0.49
MT-RNR1-201ENST00000389680 PLSCR2Q9NRY7 297 aa12.01□□□□□ -0.49
MT-RNR1-201ENST00000389680 ADGRG1Q9Y653 693 aa12.01□□□□□ -0.49
MT-RNR1-201ENST00000389680 MDM2Q00987 491 aaPredicted RBP12□□□□□ -0.49
MT-RNR1-201ENST00000389680 METTL3Q86U44 580 aaKnown RBP12□□□□□ -0.49
MT-RNR1-201ENST00000389680 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
MT-RNR1-201ENST00000389680 PHOX2BQ99453 314 aa12□□□□□ -0.49
MT-RNR1-201ENST00000389680 PTPREP23469 700 aa11.99□□□□□ -0.49
MT-RNR1-201ENST00000389680 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
MT-RNR1-201ENST00000389680 PLEKHG3A1L390 1219 aa11.98□□□□□ -0.49
MT-RNR1-201ENST00000389680 COL9A1P20849 921 aa11.98□□□□□ -0.49
MT-RNR1-201ENST00000389680 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
MT-RNR1-201ENST00000389680 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
MT-RNR1-201ENST00000389680 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
MT-RNR1-201ENST00000389680 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
MT-RNR1-201ENST00000389680 MS4A1P11836 297 aa11.96□□□□□ -0.49
MT-RNR1-201ENST00000389680 RBM46Q8TBY0 533 aaKnown RBP11.95□□□□□ -0.5
MT-RNR1-201ENST00000389680 C14orf37Q86TY3 774 aa11.94□□□□□ -0.5
MT-RNR1-201ENST00000389680 NLRP7Q8WX94 980 aa11.93□□□□□ -0.5
MT-RNR1-201ENST00000389680 KCNH8Q96L42 1107 aa11.92□□□□□ -0.5
MT-RNR1-201ENST00000389680 FAM198AQ9UFP1 575 aa11.92□□□□□ -0.5
MT-RNR1-201ENST00000389680 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
MT-RNR1-201ENST00000389680 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
MT-RNR1-201ENST00000389680 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
MT-RNR1-201ENST00000389680 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
MT-RNR1-201ENST00000389680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.88□□□□□ -0.51
MT-RNR1-201ENST00000389680 TRIM6-TRIM34B2RNG4 842 aa11.88□□□□□ -0.51
MT-RNR1-201ENST00000389680 NBPF26B4DH59 902 aa11.88□□□□□ -0.51
MT-RNR1-201ENST00000389680 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
MT-RNR1-201ENST00000389680 EYA1Q99502 592 aa11.87□□□□□ -0.51
MT-RNR1-201ENST00000389680 GOPCQ9HD26 462 aa11.87□□□□□ -0.51
MT-RNR1-201ENST00000389680 ERBB3P21860 1342 aa11.86□□□□□ -0.51
MT-RNR1-201ENST00000389680 NUDT18Q6ZVK8 323 aa11.86□□□□□ -0.51
MT-RNR1-201ENST00000389680 BEGAINQ9BUH8 593 aa11.86□□□□□ -0.51
MT-RNR1-201ENST00000389680 RCCD1A6NED2 376 aa11.85□□□□□ -0.51
MT-RNR1-201ENST00000389680 PNMA3Q9UL41 463 aa11.85□□□□□ -0.51
MT-RNR1-201ENST00000389680 PROX2Q3B8N5 592 aa11.84□□□□□ -0.51
MT-RNR1-201ENST00000389680 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
MT-RNR1-201ENST00000389680 TATDN2Q93075 761 aa11.84□□□□□ -0.51
MT-RNR1-201ENST00000389680 ONECUT3O60422 494 aaPredicted RBP11.83□□□□□ -0.52
MT-RNR1-201ENST00000389680 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
MT-RNR1-201ENST00000389680 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
MT-RNR1-201ENST00000389680 ST18O60284 1047 aa11.82□□□□□ -0.52
MT-RNR1-201ENST00000389680 DNAJB2P25686 324 aa11.82□□□□□ -0.52
MT-RNR1-201ENST00000389680 SH3D19Q5HYK7 790 aa11.82□□□□□ -0.52
MT-RNR1-201ENST00000389680 PCMTD1Q96MG8 357 aaPredicted RBP11.82□□□□□ -0.52
MT-RNR1-201ENST00000389680 PSEN2P49810 448 aa11.81□□□□□ -0.52
MT-RNR1-201ENST00000389680 EMP3P54852 163 aa11.81□□□□□ -0.52
MT-RNR1-201ENST00000389680 ARHGAP33O14559 1287 aa11.8□□□□□ -0.52
MT-RNR1-201ENST00000389680 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
MT-RNR1-201ENST00000389680 KIAA1468Q9P260 1216 aa11.79□□□□□ -0.52
MT-RNR1-201ENST00000389680 SMAPO00193 183 aa11.78□□□□□ -0.52
MT-RNR1-201ENST00000389680 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
MT-RNR1-201ENST00000389680 SKIV2LQ15477 1246 aaKnown RBP11.77□□□□□ -0.53
MT-RNR1-201ENST00000389680 MARVELD3Q96A59 401 aa11.77□□□□□ -0.53
MT-RNR1-201ENST00000389680 TMEM134Q9H6X4 195 aa11.77□□□□□ -0.53
MT-RNR1-201ENST00000389680 PBX2P40425 430 aa11.76□□□□□ -0.53
MT-RNR1-201ENST00000389680 SLC4A5Q9BY07 1137 aa11.75□□□□□ -0.53
MT-RNR1-201ENST00000389680 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
MT-RNR1-201ENST00000389680 AXIN2Q9Y2T1 843 aa11.75□□□□□ -0.53
MT-RNR1-201ENST00000389680 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
MT-RNR1-201ENST00000389680 DIXDC1Q155Q3 683 aa11.74□□□□□ -0.53
MT-RNR1-201ENST00000389680 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
MT-RNR1-201ENST00000389680 RABGEF1Q9UJ41 708 aa11.74□□□□□ -0.53
MT-RNR1-201ENST00000389680 FAM205CA6NFA0 338 aa11.73□□□□□ -0.53
MT-RNR1-201ENST00000389680 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms