RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 NFKBIBQ15653 356 aa22.91■■□□□ 1.26
SSC5D-201ENST00000389623 SKOR2Q2VWA4 1001 aaPredicted RBP22.91■■□□□ 1.26
SSC5D-201ENST00000389623 ST18O60284 1047 aa22.91■■□□□ 1.26
SSC5D-201ENST00000389623 VSIG10Q8N0Z9 540 aa22.91■■□□□ 1.26
SSC5D-201ENST00000389623 EFCAB2Q5VUJ9 269 aa22.91■■□□□ 1.26
SSC5D-201ENST00000389623 HMMRO75330 724 aa22.91■■□□□ 1.26
SSC5D-201ENST00000389623 CNTLNQ9NXG0 1405 aa22.9■■□□□ 1.26
SSC5D-201ENST00000389623 RSPH4AQ5TD94 716 aa22.9■■□□□ 1.26
SSC5D-201ENST00000389623 APAF1O14727 1248 aa22.89■■□□□ 1.26
SSC5D-201ENST00000389623 LMOD2Q6P5Q4 547 aa22.88■■□□□ 1.25
SSC5D-201ENST00000389623 WASHC2AQ641Q2 1341 aa22.88■■□□□ 1.25
SSC5D-201ENST00000389623 ZKSCAN2Q63HK3 967 aa22.87■■□□□ 1.25
SSC5D-201ENST00000389623 HTATSF1O43719 755 aaKnown RBP22.87■■□□□ 1.25
SSC5D-201ENST00000389623 CCDC144AA2RUR9 1427 aa22.86■■□□□ 1.25
SSC5D-201ENST00000389623 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
SSC5D-201ENST00000389623 CHMP5Q9NZZ3 219 aa22.85■■□□□ 1.25
SSC5D-201ENST00000389623 TRIM6-TRIM34B2RNG4 842 aa22.85■■□□□ 1.25
SSC5D-201ENST00000389623 PHF14O94880 888 aa22.85■■□□□ 1.25
SSC5D-201ENST00000389623 TERF2IPQ9NYB0 399 aa22.85■■□□□ 1.25
SSC5D-201ENST00000389623 AMER1Q5JTC6 1135 aaPredicted RBP22.84■■□□□ 1.25
SSC5D-201ENST00000389623 NGEFQ8N5V2 710 aa22.83■■□□□ 1.25
SSC5D-201ENST00000389623 STK31Q9BXU1 1019 aa22.83■■□□□ 1.25
SSC5D-201ENST00000389623 NOL8Q76FK4 1167 aaKnown RBP22.83■■□□□ 1.24
SSC5D-201ENST00000389623 KIF21BO75037 1637 aa22.82■■□□□ 1.24
SSC5D-201ENST00000389623 CSPP1Q1MSJ5 1256 aa22.81■■□□□ 1.24
SSC5D-201ENST00000389623 ANKRD45Q5TZF3 282 aa22.81■■□□□ 1.24
SSC5D-201ENST00000389623 KIF3BO15066 747 aa22.81■■□□□ 1.24
SSC5D-201ENST00000389623 PAK3O75914 559 aaPredicted RBP22.81■■□□□ 1.24
SSC5D-201ENST00000389623 CADPSQ9ULU8 1353 aa22.81■■□□□ 1.24
SSC5D-201ENST00000389623 ERCC6Q03468 1493 aa22.8■■□□□ 1.24
SSC5D-201ENST00000389623 FGD6Q6ZV73 1430 aa22.79■■□□□ 1.24
SSC5D-201ENST00000389623 FOXD4L5Q5VV16 416 aaPredicted RBP22.79■■□□□ 1.24
SSC5D-201ENST00000389623 FOXD4L4Q8WXT5 416 aaPredicted RBP22.79■■□□□ 1.24
SSC5D-201ENST00000389623 HDGFP51858 240 aaKnown RBP22.79■■□□□ 1.24
SSC5D-201ENST00000389623 LMOD3Q0VAK6 560 aa22.78■■□□□ 1.24
SSC5D-201ENST00000389623 SLC4A10Q6U841 1118 aa22.78■■□□□ 1.24
SSC5D-201ENST00000389623 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
SSC5D-201ENST00000389623 PDS5BQ9NTI5 1447 aa22.76■■□□□ 1.23
SSC5D-201ENST00000389623 SPAG9O60271 1321 aaKnown RBP22.76■■□□□ 1.23
SSC5D-201ENST00000389623 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
SSC5D-201ENST00000389623 TRAK1Q9UPV9 953 aa22.75■■□□□ 1.23
SSC5D-201ENST00000389623 GNL2Q13823 731 aaKnown RBP22.74■■□□□ 1.23
SSC5D-201ENST00000389623 CHMP4AQ9BY43 222 aa22.74■■□□□ 1.23
SSC5D-201ENST00000389623 DDX19BQ9UMR2 479 aa22.74■■□□□ 1.23
SSC5D-201ENST00000389623 BRD4O60885 1362 aaPredicted RBP22.73■■□□□ 1.23
SSC5D-201ENST00000389623 RRBP1Q9P2E9 1410 aaKnown RBP22.72■■□□□ 1.23
SSC5D-201ENST00000389623 ELL2O00472 640 aaPredicted RBP22.72■■□□□ 1.23
SSC5D-201ENST00000389623 DZIP1LQ8IYY4 767 aaKnown RBP22.71■■□□□ 1.23
SSC5D-201ENST00000389623 IGF1RP08069 1367 aa22.71■■□□□ 1.23
SSC5D-201ENST00000389623 LRRC9Q6ZRR7 1453 aa22.71■■□□□ 1.23
SSC5D-201ENST00000389623 BRPF3Q9ULD4 1205 aa22.71■■□□□ 1.23
SSC5D-201ENST00000389623 FAM43AQ8N2R8 423 aa22.7■■□□□ 1.23
SSC5D-201ENST00000389623 IL27Q8NEV9 243 aa22.7■■□□□ 1.22
SSC5D-201ENST00000389623 MYOM3Q5VTT5 1437 aa22.7■■□□□ 1.22
SSC5D-201ENST00000389623 KIF16BQ96L93 1317 aa22.69■■□□□ 1.22
SSC5D-201ENST00000389623 GPATCH3Q96I76 525 aa22.69■■□□□ 1.22
SSC5D-201ENST00000389623 TPM4P67936 248 aa22.69■■□□□ 1.22
SSC5D-201ENST00000389623 CDCA7LQ96GN5 454 aa22.68■■□□□ 1.22
SSC5D-201ENST00000389623 HDAC5Q9UQL6 1122 aa22.68■■□□□ 1.22
SSC5D-201ENST00000389623 C22orf23Q9BZE7 217 aa22.68■■□□□ 1.22
SSC5D-201ENST00000389623 TNNT3P45378 269 aaPredicted RBP22.67■■□□□ 1.22
SSC5D-201ENST00000389623 MRE11P49959 708 aa22.66■■□□□ 1.22
SSC5D-201ENST00000389623 ATP6V1DQ9Y5K8 247 aa22.66■■□□□ 1.22
SSC5D-201ENST00000389623 FRAT2O75474 233 aaPredicted RBP22.66■■□□□ 1.22
SSC5D-201ENST00000389623 BACH2Q9BYV9 841 aa22.66■■□□□ 1.22
SSC5D-201ENST00000389623 AAMPQ13685 434 aa22.66■■□□□ 1.22
SSC5D-201ENST00000389623 MLECQ14165 292 aa22.66■■□□□ 1.22
SSC5D-201ENST00000389623 FAM13BQ9NYF5 915 aa22.66■■□□□ 1.22
SSC5D-201ENST00000389623 FOXD4L6Q3SYB3 417 aaPredicted RBP22.65■■□□□ 1.22
SSC5D-201ENST00000389623 FOXD4L3Q6VB84 417 aaPredicted RBP22.65■■□□□ 1.22
SSC5D-201ENST00000389623 REC8O95072 547 aa22.65■■□□□ 1.22
SSC5D-201ENST00000389623 AKNAQ7Z591 1439 aa22.64■■□□□ 1.21
SSC5D-201ENST00000389623 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.63■■□□□ 1.21
SSC5D-201ENST00000389623 PANK1Q8TE04 598 aa22.63■■□□□ 1.21
SSC5D-201ENST00000389623 ANO8Q9HCE9 1232 aaPredicted RBP22.63■■□□□ 1.21
SSC5D-201ENST00000389623 RILPL2Q969X0 211 aa22.62■■□□□ 1.21
SSC5D-201ENST00000389623 ADAMTS8Q9UP79 889 aa22.62■■□□□ 1.21
SSC5D-201ENST00000389623 TULP1O00294 542 aaPredicted RBP22.62■■□□□ 1.21
SSC5D-201ENST00000389623 JPH4Q96JJ6 628 aa22.62■■□□□ 1.21
SSC5D-201ENST00000389623 HSP90B1P14625 803 aaKnown RBP22.61■■□□□ 1.21
SSC5D-201ENST00000389623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.61■■□□□ 1.21
SSC5D-201ENST00000389623 NUTM2DQ5VT03 806 aaPredicted RBP22.61■■□□□ 1.21
SSC5D-201ENST00000389623 NUCB2P80303 420 aa22.6■■□□□ 1.21
SSC5D-201ENST00000389623 MIA2Q96PC5 1412 aa22.6■■□□□ 1.21
SSC5D-201ENST00000389623 RUNDC1Q96C34 613 aa22.6■■□□□ 1.21
SSC5D-201ENST00000389623 LNPKQ9C0E8 428 aa22.6■■□□□ 1.21
SSC5D-201ENST00000389623 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
SSC5D-201ENST00000389623 KIF3AQ9Y496 699 aa22.58■■□□□ 1.21
SSC5D-201ENST00000389623 PNISRQ8TF01 805 aaKnown RBP22.58■■□□□ 1.2
SSC5D-201ENST00000389623 TRAK2O60296 914 aa22.57■■□□□ 1.2
SSC5D-201ENST00000389623 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
SSC5D-201ENST00000389623 MSH5O43196 834 aa22.56■■□□□ 1.2
SSC5D-201ENST00000389623 CCDC184Q52MB2 194 aa22.56■■□□□ 1.2
SSC5D-201ENST00000389623 CCDC34Q96HJ3 373 aa22.56■■□□□ 1.2
SSC5D-201ENST00000389623 CUX1P39880 1505 aa22.55■■□□□ 1.2
SSC5D-201ENST00000389623 EVC2Q86UK5 1308 aa22.55■■□□□ 1.2
SSC5D-201ENST00000389623 WASHC2CQ9Y4E1 1318 aa22.55■■□□□ 1.2
SSC5D-201ENST00000389623 API5Q9BZZ5 524 aaKnown RBP22.55■■□□□ 1.2
SSC5D-201ENST00000389623 GOLGA6L19H0YKK7 550 aa22.54■■□□□ 1.2
SSC5D-201ENST00000389623 SMG6Q86US8 1419 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms