RNA–Protein interactions for RNA: ENST00000388901.9

COPS2-202, Transcript of COP9 signalosome subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS2, Length 6,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-202ENST00000388901 LAMC3Q9Y6N6 1575 aa5.42□□□□□ -1.54
COPS2-202ENST00000388901 KCNJ4P48050 445 aa5.42□□□□□ -1.54
COPS2-202ENST00000388901 FGD1P98174 961 aa5.42□□□□□ -1.54
COPS2-202ENST00000388901 CC2D1BQ5T0F9 858 aaKnown RBP5.42□□□□□ -1.54
COPS2-202ENST00000388901 PPP6R1Q9UPN7 881 aa5.42□□□□□ -1.54
COPS2-202ENST00000388901 GOLGA6L4A6NEF3 574 aa5.42□□□□□ -1.54
COPS2-202ENST00000388901 KIAA0586Q9BVV6 1533 aa5.42□□□□□ -1.54
COPS2-202ENST00000388901 U2AF1L5P0DN76 240 aaPredicted RBP5.42□□□□□ -1.54
COPS2-202ENST00000388901 TNNT2P45379 298 aaPredicted RBP5.42□□□□□ -1.54
COPS2-202ENST00000388901 U2AF1Q01081 240 aaKnown RBP eCLIP5.42□□□□□ -1.54
COPS2-202ENST00000388901 SUPT16HQ9Y5B9 1047 aaKnown RBP5.42□□□□□ -1.54
COPS2-202ENST00000388901 ANKRD50Q9ULJ7 1429 aa5.41□□□□□ -1.54
COPS2-202ENST00000388901 TROQ12816 1431 aaPredicted RBP5.41□□□□□ -1.54
COPS2-202ENST00000388901 POGZQ7Z3K3 1410 aa5.41□□□□□ -1.54
COPS2-202ENST00000388901 HSP90B1P14625 803 aaKnown RBP5.41□□□□□ -1.54
COPS2-202ENST00000388901 FRAT1Q92837 279 aaPredicted RBP5.41□□□□□ -1.54
COPS2-202ENST00000388901 HECW1Q76N89 1606 aa5.41□□□□□ -1.54
COPS2-202ENST00000388901 ABCA10Q8WWZ4 1543 aa5.41□□□□□ -1.54
COPS2-202ENST00000388901 PEG3Q9GZU2 1588 aa5.41□□□□□ -1.54
COPS2-202ENST00000388901 NPHP1O15259 732 aa5.41□□□□□ -1.54
COPS2-202ENST00000388901 PTMAP06454 111 aaKnown RBP5.41□□□□□ -1.54
COPS2-202ENST00000388901 HNRNPMP52272 730 aaKnown RBP eCLIP5.41□□□□□ -1.54
COPS2-202ENST00000388901 CENPJQ9HC77 1338 aaPredicted RBP5.41□□□□□ -1.54
COPS2-202ENST00000388901 NOP58Q9Y2X3 529 aaKnown RBP5.4□□□□□ -1.54
COPS2-202ENST00000388901 COG3Q96JB2 828 aa5.4□□□□□ -1.54
COPS2-202ENST00000388901 API5Q9BZZ5 524 aaKnown RBP5.4□□□□□ -1.54
COPS2-202ENST00000388901 LAS1LQ9Y4W2 734 aaKnown RBP5.4□□□□□ -1.54
COPS2-202ENST00000388901 NINLQ9Y2I6 1382 aa5.4□□□□□ -1.54
COPS2-202ENST00000388901 NCOA2Q15596 1464 aa5.4□□□□□ -1.55
COPS2-202ENST00000388901 LMOD2Q6P5Q4 547 aa5.4□□□□□ -1.55
COPS2-202ENST00000388901 ZBED9Q6R2W3 1325 aa5.4□□□□□ -1.55
COPS2-202ENST00000388901 CHAF1AQ13111 956 aaPredicted RBP5.4□□□□□ -1.55
COPS2-202ENST00000388901 SLC52A1Q9NWF4 448 aa5.4□□□□□ -1.55
COPS2-202ENST00000388901 CCDC7Q96M83 1385 aa5.39□□□□□ -1.55
COPS2-202ENST00000388901 CT47B1P0C2W7 299 aaPredicted RBP5.39□□□□□ -1.55
COPS2-202ENST00000388901 TPM4P67936 248 aa5.39□□□□□ -1.55
COPS2-202ENST00000388901 HSP90AB4PQ58FF6 505 aa5.39□□□□□ -1.55
COPS2-202ENST00000388901 NGDNQ8NEJ9 315 aaKnown RBP5.39□□□□□ -1.55
COPS2-202ENST00000388901 TOPBP1Q92547 1522 aa5.39□□□□□ -1.55
COPS2-202ENST00000388901 IL27Q8NEV9 243 aa5.39□□□□□ -1.55
COPS2-202ENST00000388901 USP47Q96K76 1375 aa5.39□□□□□ -1.55
COPS2-202ENST00000388901 CSB-PGBD3P0DP91 1061 aa5.39□□□□□ -1.55
COPS2-202ENST00000388901 MAGI1Q96QZ7 1491 aaPredicted RBP5.39□□□□□ -1.55
COPS2-202ENST00000388901 ANKRD30BQ9BXX2 1392 aa5.39□□□□□ -1.55
COPS2-202ENST00000388901 ATP6V1DQ9Y5K8 247 aa5.39□□□□□ -1.55
COPS2-202ENST00000388901 CENPQQ7L2Z9 268 aaPredicted RBP5.38□□□□□ -1.55
COPS2-202ENST00000388901 NEUROD2Q15784 382 aa5.38□□□□□ -1.55
COPS2-202ENST00000388901 AMPHP49418 695 aa5.38□□□□□ -1.55
COPS2-202ENST00000388901 SMC4Q9NTJ3 1288 aa5.38□□□□□ -1.55
COPS2-202ENST00000388901 BRD4O60885 1362 aaPredicted RBP5.38□□□□□ -1.55
COPS2-202ENST00000388901 CUL7Q14999 1698 aa5.38□□□□□ -1.55
COPS2-202ENST00000388901 PHF14O94880 888 aa5.38□□□□□ -1.55
COPS2-202ENST00000388901 MLECQ14165 292 aa5.37□□□□□ -1.55
COPS2-202ENST00000388901 KIF16BQ96L93 1317 aa5.37□□□□□ -1.55
COPS2-202ENST00000388901 ZKSCAN2Q63HK3 967 aa5.37□□□□□ -1.55
COPS2-202ENST00000388901 DDX58O95786 925 aaKnown RBP5.37□□□□□ -1.55
COPS2-202ENST00000388901 RUFY2Q8WXA3 655 aa5.37□□□□□ -1.55
COPS2-202ENST00000388901 ZNF428Q96B54 188 aa5.37□□□□□ -1.55
COPS2-202ENST00000388901 HIRIP3Q9BW71 556 aaPredicted RBP5.37□□□□□ -1.55
COPS2-202ENST00000388901 GNAI1P63096 354 aa5.37□□□□□ -1.55
COPS2-202ENST00000388901 SKOR2Q2VWA4 1001 aaPredicted RBP5.37□□□□□ -1.55
COPS2-202ENST00000388901 PRG4Q92954 1404 aaPredicted RBP5.37□□□□□ -1.55
COPS2-202ENST00000388901 DDX19BQ9UMR2 479 aa5.37□□□□□ -1.55
COPS2-202ENST00000388901 CCDC141Q6ZP82 1450 aa5.37□□□□□ -1.55
COPS2-202ENST00000388901 RAD54L2Q9Y4B4 1467 aa5.36□□□□□ -1.55
COPS2-202ENST00000388901 ST18O60284 1047 aa5.36□□□□□ -1.55
COPS2-202ENST00000388901 C1orf141Q5JVX7 400 aa5.36□□□□□ -1.55
COPS2-202ENST00000388901 KIAA1107Q9UPP5 1409 aa5.36□□□□□ -1.55
COPS2-202ENST00000388901 NEXNQ0ZGT2 675 aa5.36□□□□□ -1.55
COPS2-202ENST00000388901 PRKRIP1Q9H875 184 aaPredicted RBP5.36□□□□□ -1.55
COPS2-202ENST00000388901 AKNAQ7Z591 1439 aa5.36□□□□□ -1.55
COPS2-202ENST00000388901 POLA1P09884 1462 aaPredicted RBP5.36□□□□□ -1.55
COPS2-202ENST00000388901 CC2D2AQ9P2K1 1620 aa5.36□□□□□ -1.55
COPS2-202ENST00000388901 ITPRIPQ8IWB1 547 aa5.36□□□□□ -1.55
COPS2-202ENST00000388901 ZNF692Q9BU19 519 aaPredicted RBP5.36□□□□□ -1.55
COPS2-202ENST00000388901 STK26Q9P289 416 aa5.36□□□□□ -1.55
COPS2-202ENST00000388901 ARXQ96QS3 562 aa5.35□□□□□ -1.55
COPS2-202ENST00000388901 PDIA4P13667 645 aaKnown RBP5.35□□□□□ -1.55
COPS2-202ENST00000388901 RGS3P49796 1198 aa5.35□□□□□ -1.55
COPS2-202ENST00000388901 DIAPH1O60610 1272 aaKnown RBP5.35□□□□□ -1.55
COPS2-202ENST00000388901 PNISRQ8TF01 805 aaKnown RBP5.35□□□□□ -1.55
COPS2-202ENST00000388901 ARHGAP5Q13017 1502 aa5.35□□□□□ -1.55
COPS2-202ENST00000388901 KIAA2012Q0VF49 1180 aa5.35□□□□□ -1.55
COPS2-202ENST00000388901 RUNDC1Q96C34 613 aa5.35□□□□□ -1.55
COPS2-202ENST00000388901 THOC2Q8NI27 1593 aaKnown RBP5.35□□□□□ -1.55
COPS2-202ENST00000388901 DDX11L8A8MPP1 907 aa5.34□□□□□ -1.55
COPS2-202ENST00000388901 PSME1Q06323 249 aa5.34□□□□□ -1.55
COPS2-202ENST00000388901 GNL2Q13823 731 aaKnown RBP5.34□□□□□ -1.55
COPS2-202ENST00000388901 GORABQ5T7V8 394 aa5.34□□□□□ -1.55
COPS2-202ENST00000388901 CPLX2Q6PUV4 134 aaKnown RBP5.34□□□□□ -1.55
COPS2-202ENST00000388901 ATAD2Q6PL18 1390 aa5.34□□□□□ -1.55
COPS2-202ENST00000388901 REC8O95072 547 aa5.34□□□□□ -1.55
COPS2-202ENST00000388901 ST20-MTHFSA0A0A6YYL1 179 aa5.34□□□□□ -1.55
COPS2-202ENST00000388901 THEMISQ8N1K5 641 aaPredicted RBP5.34□□□□□ -1.55
COPS2-202ENST00000388901 TAF7LQ5H9L4 462 aa5.34□□□□□ -1.56
COPS2-202ENST00000388901 C9orf84Q5VXU9 1444 aa5.34□□□□□ -1.56
COPS2-202ENST00000388901 PAK3O75914 559 aaPredicted RBP5.33□□□□□ -1.56
COPS2-202ENST00000388901 AMOTL1Q8IY63 956 aa5.33□□□□□ -1.56
COPS2-202ENST00000388901 GPRASP1Q5JY77 1395 aa5.33□□□□□ -1.56
COPS2-202ENST00000388901 TEFQ10587 303 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms