RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
RNU6-549P-201ENST00000384433 REPIN1Q9BWE0 567 aaKnown RBP9.47□□□□□ -0.89
RNU6-549P-201ENST00000384433 FAM161AQ3B820 660 aa9.46□□□□□ -0.9
RNU6-549P-201ENST00000384433 PHOX2BQ99453 314 aa9.46□□□□□ -0.9
RNU6-549P-201ENST00000384433 PLEKHG3A1L390 1219 aa9.45□□□□□ -0.9
RNU6-549P-201ENST00000384433 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
RNU6-549P-201ENST00000384433 JPH4Q96JJ6 628 aa9.45□□□□□ -0.9
RNU6-549P-201ENST00000384433 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
RNU6-549P-201ENST00000384433 ADAM33Q9BZ11 813 aa9.43□□□□□ -0.9
RNU6-549P-201ENST00000384433 C6orf132Q5T0Z8 1188 aa9.42□□□□□ -0.9
RNU6-549P-201ENST00000384433 DOK7Q18PE1 504 aa9.41□□□□□ -0.9
RNU6-549P-201ENST00000384433 C14orf37Q86TY3 774 aa9.41□□□□□ -0.9
RNU6-549P-201ENST00000384433 NLRP7Q8WX94 980 aa9.41□□□□□ -0.9
RNU6-549P-201ENST00000384433 FBXW7Q969H0 707 aa9.41□□□□□ -0.9
RNU6-549P-201ENST00000384433 MS4A1P11836 297 aa9.4□□□□□ -0.9
RNU6-549P-201ENST00000384433 TTLL12Q14166 644 aaPredicted RBP9.4□□□□□ -0.9
RNU6-549P-201ENST00000384433 PADI6Q6TGC4 694 aa9.4□□□□□ -0.9
RNU6-549P-201ENST00000384433 ZDHHC16Q969W1 377 aa9.4□□□□□ -0.9
RNU6-549P-201ENST00000384433 LHX6Q9UPM6 363 aa9.4□□□□□ -0.9
RNU6-549P-201ENST00000384433 GIGYF2Q6Y7W6 1299 aaKnown RBP9.38□□□□□ -0.91
RNU6-549P-201ENST00000384433 TMUB1Q9BVT8 246 aa9.38□□□□□ -0.91
RNU6-549P-201ENST00000384433 SCUBE2Q9NQ36 999 aa9.38□□□□□ -0.91
RNU6-549P-201ENST00000384433 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
RNU6-549P-201ENST00000384433 FAM198AQ9UFP1 575 aa9.36□□□□□ -0.91
RNU6-549P-201ENST00000384433 COL9A1P20849 921 aa9.35□□□□□ -0.91
RNU6-549P-201ENST00000384433 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
RNU6-549P-201ENST00000384433 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
RNU6-549P-201ENST00000384433 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
RNU6-549P-201ENST00000384433 ADGRG1Q9Y653 693 aa9.35□□□□□ -0.91
RNU6-549P-201ENST00000384433 RIMBP2O15034 1052 aa9.33□□□□□ -0.92
RNU6-549P-201ENST00000384433 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
RNU6-549P-201ENST00000384433 METTL3Q86U44 580 aaKnown RBP9.33□□□□□ -0.92
RNU6-549P-201ENST00000384433 DDRGK1Q96HY6 314 aa9.33□□□□□ -0.92
RNU6-549P-201ENST00000384433 C3orf80F5H4A9 247 aa9.32□□□□□ -0.92
RNU6-549P-201ENST00000384433 PRSS12P56730 875 aa9.32□□□□□ -0.92
RNU6-549P-201ENST00000384433 PXYLP1Q8TE99 480 aa9.31□□□□□ -0.92
RNU6-549P-201ENST00000384433 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
RNU6-549P-201ENST00000384433 CDCA7LQ96GN5 454 aa9.31□□□□□ -0.92
RNU6-549P-201ENST00000384433 CERKQ8TCT0 537 aa9.3□□□□□ -0.92
RNU6-549P-201ENST00000384433 GPCPD1Q9NPB8 672 aa9.3□□□□□ -0.92
RNU6-549P-201ENST00000384433 SSTR3P32745 418 aaPredicted RBP9.29□□□□□ -0.92
RNU6-549P-201ENST00000384433 CLCN1P35523 988 aa9.29□□□□□ -0.92
RNU6-549P-201ENST00000384433 OATP04181 439 aa9.28□□□□□ -0.92
RNU6-549P-201ENST00000384433 HOXB1P14653 301 aaPredicted RBP9.28□□□□□ -0.92
RNU6-549P-201ENST00000384433 ERICH6Q7L0X2 663 aa9.28□□□□□ -0.92
RNU6-549P-201ENST00000384433 BCL2L12Q9HB09 334 aa9.28□□□□□ -0.92
RNU6-549P-201ENST00000384433 DAXXQ9UER7 740 aaPredicted RBP9.28□□□□□ -0.92
RNU6-549P-201ENST00000384433 TSKSQ9UJT2 592 aa9.28□□□□□ -0.92
RNU6-549P-201ENST00000384433 PPP4R3BQ5MIZ7 849 aa9.27□□□□□ -0.93
RNU6-549P-201ENST00000384433 FAM217BQ9NTX9 383 aaPredicted RBP9.27□□□□□ -0.93
RNU6-549P-201ENST00000384433 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
RNU6-549P-201ENST00000384433 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
RNU6-549P-201ENST00000384433 BEGAINQ9BUH8 593 aa9.25□□□□□ -0.93
RNU6-549P-201ENST00000384433 EYA1Q99502 592 aa9.24□□□□□ -0.93
RNU6-549P-201ENST00000384433 PTPREP23469 700 aa9.23□□□□□ -0.93
RNU6-549P-201ENST00000384433 RCCD1A6NED2 376 aa9.22□□□□□ -0.93
RNU6-549P-201ENST00000384433 PPP1R3GB7ZBB8 358 aa9.22□□□□□ -0.93
RNU6-549P-201ENST00000384433 SMAPO00193 183 aa9.22□□□□□ -0.93
RNU6-549P-201ENST00000384433 SNPHO15079 494 aa9.22□□□□□ -0.93
RNU6-549P-201ENST00000384433 PROX2Q3B8N5 592 aa9.22□□□□□ -0.93
RNU6-549P-201ENST00000384433 PROCA1Q8NCQ7 364 aaPredicted RBP9.22□□□□□ -0.93
RNU6-549P-201ENST00000384433 NUDT18Q6ZVK8 323 aa9.21□□□□□ -0.94
RNU6-549P-201ENST00000384433 RBM46Q8TBY0 533 aaKnown RBP9.21□□□□□ -0.94
RNU6-549P-201ENST00000384433 GOPCQ9HD26 462 aa9.21□□□□□ -0.94
RNU6-549P-201ENST00000384433 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
RNU6-549P-201ENST00000384433 SH3D19Q5HYK7 790 aa9.2□□□□□ -0.94
RNU6-549P-201ENST00000384433 KCNK17Q96T54 332 aa9.2□□□□□ -0.94
RNU6-549P-201ENST00000384433 POLR3EQ9NVU0 708 aa9.2□□□□□ -0.94
RNU6-549P-201ENST00000384433 TRIM6-TRIM34B2RNG4 842 aa9.19□□□□□ -0.94
RNU6-549P-201ENST00000384433 POTEEQ6S8J3 1075 aa9.19□□□□□ -0.94
RNU6-549P-201ENST00000384433 PCMTD1Q96MG8 357 aaPredicted RBP9.19□□□□□ -0.94
RNU6-549P-201ENST00000384433 PNMA3Q9UL41 463 aa9.19□□□□□ -0.94
RNU6-549P-201ENST00000384433 PSEN2P49810 448 aa9.18□□□□□ -0.94
RNU6-549P-201ENST00000384433 FBXO31Q5XUX0 539 aaPredicted RBP9.18□□□□□ -0.94
RNU6-549P-201ENST00000384433 TATDN2Q93075 761 aa9.18□□□□□ -0.94
RNU6-549P-201ENST00000384433 SKIV2LQ15477 1246 aaKnown RBP9.17□□□□□ -0.94
RNU6-549P-201ENST00000384433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.16□□□□□ -0.94
RNU6-549P-201ENST00000384433 ONECUT3O60422 494 aaPredicted RBP9.16□□□□□ -0.94
RNU6-549P-201ENST00000384433 MYSM1Q5VVJ2 828 aa9.16□□□□□ -0.94
RNU6-549P-201ENST00000384433 LHX8Q68G74 356 aa9.15□□□□□ -0.94
RNU6-549P-201ENST00000384433 TBC1D2Q9BYX2 928 aa9.15□□□□□ -0.94
RNU6-549P-201ENST00000384433 ZMYND15Q9H091 742 aa9.15□□□□□ -0.94
RNU6-549P-201ENST00000384433 AXIN2Q9Y2T1 843 aa9.15□□□□□ -0.94
RNU6-549P-201ENST00000384433 ZBED2Q9BTP6 218 aa9.14□□□□□ -0.95
RNU6-549P-201ENST00000384433 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
RNU6-549P-201ENST00000384433 DDX11L8A8MPP1 907 aa9.13□□□□□ -0.95
RNU6-549P-201ENST00000384433 NBPF26B4DH59 902 aa9.13□□□□□ -0.95
RNU6-549P-201ENST00000384433 CD46P15529 392 aa9.13□□□□□ -0.95
RNU6-549P-201ENST00000384433 VARS2Q5ST30 1063 aaKnown RBP9.13□□□□□ -0.95
RNU6-549P-201ENST00000384433 DMRTA1Q5VZB9 504 aa9.13□□□□□ -0.95
RNU6-549P-201ENST00000384433 PACS2Q86VP3 889 aa9.13□□□□□ -0.95
RNU6-549P-201ENST00000384433 MARVELD3Q96A59 401 aa9.13□□□□□ -0.95
RNU6-549P-201ENST00000384433 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
RNU6-549P-201ENST00000384433 ST18O60284 1047 aa9.12□□□□□ -0.95
RNU6-549P-201ENST00000384433 DNAJB2P25686 324 aa9.12□□□□□ -0.95
RNU6-549P-201ENST00000384433 SPIRE2Q8WWL2 714 aa9.12□□□□□ -0.95
RNU6-549P-201ENST00000384433 TMEM134Q9H6X4 195 aa9.12□□□□□ -0.95
RNU6-549P-201ENST00000384433 LIMD1Q9UGP4 676 aa9.12□□□□□ -0.95
RNU6-549P-201ENST00000384433 ERBB3P21860 1342 aa9.11□□□□□ -0.95
RNU6-549P-201ENST00000384433 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms